Cebidichthys violaceus (monkeyface prickleback): 137884595
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Entry
137884595 CDS
T10484
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137884595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cve03021
]
137884595
03019 Messenger RNA biogenesis [BR:
cve03019
]
137884595
Transcription machinery [BR:
cve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
137884595
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137884595
U7-dependent histone pre-mRNA processing factors
137884595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
137884595
NCBI-ProteinID:
XP_068582549
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MATKRKVEVIVPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDAL
PYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKV
SNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVK
LLYTGDFSRQEDRHLMAAEIPSVKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRE
GRCLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKI
RKAININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVI
IAGYCVEGTLAKHIMSEPEEITTMSGQKLQLKMSVDYISFSAHTDYQQTSEFIRALKPPH
VILVHGEQNEMARLKAALIREYEDNDQVHIEVHNPRNTEAVTLNFRGEKLAKVMGSLADK
KCAQGQRVSGILVKKNFNYHILNPSDLSTYTELAMSTVKQSQAIPFTGPYSLLVCHLRNL
TGDVEELDGTEKNTLKIFKNITLVHEVGMVLLEWLANPLNDMYADAVTTVVLEVQSNPKA
QKAMETQSAVMDMDIFQTRLGVMLQDMFGEECVDFSDDKNISVTVDGKTVHICLETRSVC
YEEECTDDDSLREMVELAVQRLYDALNPVI
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaagcgcaaagtagaggtgattgtccccgcagaggagagtgaccagctgctg
atccgtccactgggcgccggtcaggaggtcgggaggtcatgcatcatcctggagttcaaa
ggaaggaaaattatgctggactgtggtatccaccctgggttggaggggatggatgctctc
ccctacatagacttgatagacccagctgagatagacctgctgctcatcagccatttccac
ttggatcactgtggagctctgccctggttcctacaaaagaccagctttaaaggcaggact
ttcatgacccacgccactaaggccatctaccgctggctactgtcagactatgtcaaagtc
agcaacatttctgcagacgacatgctgtacaccgagaccgacctggaggagagcatggat
aagatcgagaccatcaacttccacgaggtgaaggaggtggctggaatcaagttctggtgc
taccacgccggtcacgtgctgggagctgccatgttcatgatcgaaatagcgggagtcaag
ctgctgtacacgggagacttctcccggcaggaagacaggcatctgatggcagcagagatc
cccagcgtcaaacctgacatcctaatcatagagtctacctacggcacccacatccacgag
aagagggaggagcgagaagctcgcttctgtaacacggtccacgacatcgtcaacagagaa
ggccgctgtttgatcccggtgttcgccttggggcgggcccaggaactgctgctcattctg
gatgagtactggcagaaccacccagagctccacgacatccccatctactatgcttcatcc
ctggccaagaagtgcatggctgtgtaccagacctacgtcaacgcaatgaacgacaagatc
cgcaaagccatcaatatcaacaaccctttcgtcttcaagcacatcagcaacctcaagagc
atggatcactttgacgacatcggtcccagtgtggtgatggcctctcctggtatgatgcag
agcgggctctccagagagctctttgagagctggtgcaccgataagaggaacggagtcatc
atcgctggatactgtgtcgaaggcacgctggccaagcacatcatgtctgagccggaggag
atcaccaccatgtcggggcagaagctgcagctgaagatgtccgtggactacatctctttc
tcggcccacactgactaccagcagaccagcgagttcatcagggccctcaaaccacctcat
gtgatcctggtccacggggagcagaatgaaatggcccgtctgaaggctgcgctgatcagg
gagtacgaggataatgaccaggttcacatcgaagtccacaaccctcgcaacacagaagct
gtcaccctcaacttcaggggagagaagttggccaaggtgatgggctctctggctgataag
aagtgtgcccagggccagagggtgtcaggcatactggtgaaaaagaacttcaactaccac
atcctcaatccctcggacctttctacctacacagagctggccatgagcacagtgaaacaa
agccaggccatcccgttcactggaccgtactcactgctcgtctgccatctgaggaacctc
accggtgacgtagaggaactggatggaactgagaagaacacgttgaagatatttaaaaat
atcactctggtccacgaggtcggcatggtgctgctggagtggctagcaaaccctctgaac
gacatgtatgccgacgctgtcaccactgtagtgctggaggtccagtccaacccgaaggct
cagaaagccatggagacccagagtgccgttatggacatggacatcttccaaacccgactg
ggagtcatgttgcaggacatgtttggagaggaatgtgtggatttcagtgacgataagaac
atctctgtgacggtagacgggaagacggttcacatctgcttggaaacgaggtcggtgtgc
tacgaggaggaatgcacagacgacgactccctgagagagatggttgagctggcagtgcag
cggctctacgacgccctcaacccggtcatctga
DBGET
integrated database retrieval system
