Cebidichthys violaceus (monkeyface prickleback): 137884653
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Entry
137884653 CDS
T10484
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137884653
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137884653
NCBI-ProteinID:
XP_068582633
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MDNIITTTTVSSAGGVGGSSRADLSLSAGGSGERAASGGSSSTVLITSSSSSGPGGLSIS
TLGASSAVSSGGGRSVASGGSGAGFRAAGGGSSSMSSGFASGGREGKWEGGLGSVTVSTV
TKASYGPGGSGEAKRGSSSTVTHSPTPKERKNMSTSMATALSDVFYESSSTNSSPEYNRK
EYGSSATSSSATRGRTQSRESEIRARLQSASPPASWTELDDVKRLLRGKRSTSTSPTHSP
NNTLPIPKKASVDIRTVSESRSADHYGSIWSGGVSSSYSYNTNPNNLSSPSTLHPSGVQN
NLTLGSPSMNGGPSASSTGPVYGVQNNLASTGSMVLSPTGTNTPIVYGVQKNVSGTGIST
TTGRPSSPVNDDASGKDFKFVLIEKENVPIKKETERLVMTKDTGKQFMSAPARASATYSG
DSLKREKQGLSFSRAEGGTDAKSATLKVATKDKATYAEIGNEESGFNFCSCCSWWKWLLG
LLLSLLLLLGLLFGLIALGEELKRLRNRVDALEAITGTASARSSRLSASSGINIIDPLDS
SYMGSSSSGATLTRSDNGINLGAAGPGGGAGSGLGQDSAALQRAVQQLVRAELRSNAVRD
TLKGERGDPGPKGDPGLLGQKGFAGDGGFPGLPGPPGQSGHPGLDGPRGPKGSEGEPGSE
GPPGQRGRDGPMGPRGEAGPPGFGEKGDKGSQGEAGHSGPAGAAGPVGPKGAMGEQGTSG
SPGAPGPKGFQGEAGAPGEKGDRGPPGLTGTKGEHGERGPRGPAGEPGQTGPQGPAGPKG
SKGIAGDTGSMGLPGVRGVPGLPGDVGPTGAPGSPGKVIAPIGSNTVAIPGPPGPAGPPG
PAGTHGLSGPIGPAGIPGQPGPKGERGEKGEKGEQGKPGESGSSETASITGTDRLSSAVR
LPGPPGPPGPPGAPGTQGAPGEIKQGPPGRRGPAGEPGVGLPGPRGERGEPGSFVPNSET
FFAGPPGPPGPPGPQGSAGSQGPQGYQGEPGQPGLPGSPGEPGHGFPGKSGPSGPEGPPG
PEGPQGPKGYAGSPGAPGVPVVSNGGSFSPGAPGPPGQPGQPGQPGQSGQPGQPGQPGSG
SGSPDVSQYIAEYLQSFPGQPGPRGPEGPPGPEGPQGPKGDAGVPGVSNGGSFSPGAPGA
PGQPGQPGQPGQPGRDGSGSGSPDVGQYIAEYLQSDSIRQYLAGPPGAPGPPGAPGTVGD
RPVDDLANQVIAYIQSSGRGYDGTPGPPGPPGPPGTISVNDVINLLQREDVRRYVAGTPG
PPGPPGAPGLGSYGLNLQEVSERVLTLMNGGYQAGPQGPPGFPGIPGPQGPAGPAGPPGP
PGFGNYISSDIRDYLQSVAFKDQPGPSRPEGNPGRTHGLVSYAEHANRKTLKAEQQQYIK
SDSVSEAMFGLPGTPGPPGPPGHKGEPGVPSARDWNLDTGDYANMAVKVTDYIKSRGLLH
DIVREYNSRVFQGPPGPPGPAGPPGYSRGFGSHGNATDLLEYIKSHGLLRDFDRNHNERA
IQGPPGPPGPPGHPGYSRLFGSHANVTDLVEYIKTHGAIVGQPGRPGHKGDLGYPGPKGE
RGERGRPGLEGHQGQKGDRGEFPLMTSRRRRDVGV
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggacaatataattacaactacgactgtcagctctgctggaggagttggaggaagcagc
agagctgatctttctctgagtgcaggagggtcaggtgagagagctgcatcaggaggctct
agcagcaccgttctgatcacatccagcagctcctctggaccaggaggcctcagcatctca
actctaggagcctcctctgctgtgtcctccggtggagggaggtcagtggcttcggggggc
tcaggggcagggtttagggctgccggaggagggtcctctagcatgtcctctggttttgcg
agtggtggcagagaaggaaaatgggaagggggtctaggttcggtgacggtttcaacggtg
acgaaggccagctacggtccaggaggatctggggaagcgaagagaggatcgtcctccact
gtcactcattcacccactccaaaagagaggaagaacatgagcaccagcatggcaactgct
ctctcagatgtcttttacgagagttcaagcacaaactcctctccagagtacaacaggaag
gagtacggctcaagtgcaacttcaagttctgccaccagagggagaactcagagcagagag
agtgagatcagagccaggctgcagagtgcttctcctccagcaagctggacggagctggat
gacgtgaagcgcctgctgagaggaaagcgctccaccagcaccagccccactcattcccct
aacaacacgctgcccatccccaagaaggccagtgtggacattaggaccgtgtccgagagc
cgcagcgcagaccactatggcagcatttggtccggaggtgtgagcagtagctacagttac
aacaccaaccccaataacctgtcctctccctccacccttcacccgtcaggagttcagaac
aacctgacactcggctctccctccatgaacggtggaccatctgctagcagcactggtcct
gtgtatggtgttcagaataacctggccagtaccggttctatggtcctctctccaactgga
accaacacaccaatagtttacggcgtgcagaaaaatgtgtctggcactggaatcagcacc
actacagggagacccagcagtcctgttaatgacgacgcctcaggcaaagactttaagttt
gttctgatagagaaggagaatgttcccatcaagaaggagacagagcggctggtgatgacc
aaagacacagggaagcagttcatgtctgcacctgctcgggcttctgctacctactctggg
gactccctaaagagagagaagcaggggctgtcattcagcagagcggagggaggaacagat
gctaaatctgcaaccctaaaagttgctacaaaagacaaagccacctatgcagagatcggc
aacgaggagtcaggctttaacttctgctcctgctgcagctggtggaagtggctgctcggc
ctcctgctcagcctgctcctcctcctcggcctcctctttggactcatcgctttgggtgaa
gagctgaaacggctcaggaaccgcgttgatgctctcgaagccatcactggcactgcgtcg
gccaggtccagccgactgtcggcctcctctggcatcaacatcatcgacccgctcgactcg
tcatacatgggcagcagttcttccggggccaccctgacccgctctgacaacggaatcaac
ctgggggctgctgggcctggtggaggtgcaggaagtggactaggacaggacagcgctgcc
ttgcagagagccgttcagcagctggtcagggctgaactccgctcgaatgctgtaagagat
acactaaaaggggagagaggagatccaggacctaaaggtgatccagggctgctaggacaa
aaaggttttgcaggtgacggcggatttcctggcctgccaggcccccctgggcagtcggga
cacccaggattggatggaccgagaggaccaaagggaagtgaaggtgaaccaggttccgag
ggaccaccaggtcagaggggccgggacgggccgatgggcccccgtggggaagccggacca
ccaggctttggagagaaaggagacaaaggatctcaaggcgaggcaggacattcaggtcct
gctggtgctgctggtcctgtggggccgaaaggtgccatgggagagcagggtacctcaggg
agccccggcgctccaggtccaaagggtttccagggtgaagcaggagcaccaggagaaaaa
ggtgatcgaggaccaccagggctgacaggaaccaaaggagaacatggagagaggggacca
cgtggcccagcaggtgaacctggacaaactggaccacaaggacctgctggaccaaaggga
tctaaaggaattgcaggtgacaccggttcaatgggacttcctggagtgaggggagtgcct
ggacttcctggagatgttggtcccacaggtgcaccaggatcccccggtaaagtcatcgct
ccaattggctccaatactgtggcaatccctggaccaccagggcctgctgggcctccaggt
cctgctggaacccatggtctgtctggacccattggccccgctggtatcccaggacaacct
ggacctaagggagaacgaggagagaaaggagaaaagggagagcaaggaaaacctggtgag
tctggtagttcagaaactgccagtatcaccggaaccgacagactttcttcagcggttaga
ctgcctggcccaccaggacctccagggcctcctggagcacctggtactcaaggcgctcct
ggtgaaattaaacaaggtcctccaggacgcagaggtcctgcaggagagccaggagttggt
ttacctggacctcgaggagagagaggggaacctggcagctttgtgccaaattcagaaacc
ttttttgctggaccaccaggaccaccaggacccccaggcccacagggttcagcaggcagc
caaggaccacaggggtaccaaggtgaaccaggtcaaccaggtcttccagggagtccaggg
gaaccgggtcatggtttcccaggtaagtctggacccagtgggcctgagggtccaccaggc
ccagaggggccacaaggacctaaaggttatgcaggatcccctggtgcccctggagtccct
gtggtctccaatggtggctcattcagtcctggagccccaggtccacctggacaacctgga
caacctggacaacctggacaatctggacaacctggacaacctggacaacctggaagtgga
tctggatcacctgatgtgagccagtacatagcagagtaccttcagagtttcccaggtcag
cctggacccagggggcctgagggtccaccaggcccagaggggccacaaggacctaaaggt
gatgcaggagtccctggggtctccaatggtggctcatttagtcctggagccccaggagca
cctggacaacctggacaacctggacaacctggacaacctggaagagatggaagtggatct
ggatcacctgatgtgggccagtacatagcagagtaccttcagagtgatagcatcaggcag
tacctggctggacctcctggtgctcctggtcctccaggggccccggggactgtaggggac
aggccggtggatgatttggccaaccaagttatcgcctacatccagagttcaggtagagga
tatgatgggactcctggcccacctggtcctccaggtccacctggcaccatctctgtcaat
gatgttatcaacttgttacaacgagaggacgtgaggagatacgtggctggtactcctggt
ccaccaggacctcctggagctccaggcctcggcagctacggattgaacctccaggaggtg
tctgaacgtgtcctgaccctcatgaatggtgggtatcaagcaggtcctcaggggcctcct
ggtttccccggtatccctggtccacaaggtccagctggaccagcaggtccacctggccca
ccaggatttgggaactacatcagttcagacattcgtgactacctgcaaagtgtggccttc
aaagaccaaccaggcccctctagacccgagggcaaccctggtcgaacccacggcctggtt
tcctatgctgagcatgcaaacagaaagacgctgaaagcagaacaacaacaatatatcaag
agtgacagtgtgagtgaagctatgtttggtcttcccgggacgccaggccctcctggaccc
ccaggacacaagggagagccaggtgtacctagtgccagagactggaacctggatactgga
gactacgccaatatggctgtcaaagtaactgattacatcaaatcccgcggtcttctgcac
gacatcgtgagggaatacaacagtcgtgttttccaaggacctccgggaccgcctggcccc
gcaggtccccctggatacagccgggggtttggttcccatggaaacgccactgatctgttg
gaatacatcaaatctcacggtctgctgcgcgactttgatcggaaccacaatgaacgggcc
atccaagggccgccgggaccacctggccccccagggcaccccggatacagccgactgttt
ggttcccacgcaaatgtcactgatttagtggaatacatcaaaacacatggagccattgta
gggcagccggggagaccaggacacaaaggggacctgggatacccggggccaaaaggagag
agaggtgaacgaggccgtcctgggctagaaggacaccagggacagaaaggtgatagagga
gaattccctctgatgaccagcaggaggaggagggacgtcggtgtctga
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integrated database retrieval system
