KEGG   Cebidichthys violaceus (monkeyface prickleback): 137885308
Entry
137885308         CDS       T10484                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    137885308 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cve03021]
    137885308 (taf5l)
   03036 Chromosome and associated proteins [BR:cve03036]
    137885308 (taf5l)
Transcription machinery [BR:cve03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     137885308 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     137885308 (taf5l)
Chromosome and associated proteins [BR:cve03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     137885308 (taf5l)
    STAGA complex
     137885308 (taf5l)
    TFTC complex
     137885308 (taf5l)
    SAGA complex
     137885308 (taf5l)
    SLIK complex
     137885308 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd TFIID_NTD2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_Aladin ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 RMC1_N Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_DCAF4 Tricorn_2nd Beta-prop_Vps41 Beta-prop_WDR19_1st PEP5_VPS11_N Nbas_N WD40_like PROPPIN Beta-prop_IP5PC_F WD_LRWD1
Other DBs
NCBI-GeneID: 137885308
NCBI-ProteinID: XP_068583627
LinkDB
Position
Unknown
AA seq 600 aa
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQSDPQQYETQYSRLRSFLSETDISWAKEVSSILYPLFVYLHLDLVHCGLKGAVDGFYS
RFHGAFLQDSEQRATIEQLRHVLTAQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSSLCRALSTHLQVEVTASRRTDYQLYGAAGGATAAPNSTSSWAGVDGAEGGEGVEVP
AGIPQSEAALETLQDCIKKVREGPPTLTTVCFYAFHHTEQTLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKAKPHQADVSLIHLACDVLEEEADEEDGSGSEVKTLRGHSGPVFRTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTALYQGHAYPVWDVDVSPCSLYFASGSHDRTAR
LWTFSRTYPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
IDNSVRVWDIRNSHGGTPADGSSGELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKAEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcgggttcgcactgagcagatccagtacgccgtggctcagtacctgaagcggagg
cagtatgtggacaccgatggctctctgaaaggagccaagctcttccagtccgcggaggag
atggctgccagtctcacagtgcagacagagtcggggtgtgccaacatcgtctctgctgca
ccctgccagtctgacccccagcagtatgagactcagtactcccggctgcgctcctttctg
tcagaaaccgatatatcctgggcgaaggaagtgagcagcattctctacccgctcttcgtc
tacctccacctggacttggtgcactgcggcctgaagggggcggtagatggtttctacagt
cgtttccacggcgcctttcttcaggacagcgagcagcgcgccaccatagagcagctccgc
catgttctcactgctcaggacgtcgcagccaaccccaagttgagtgctttcctggagcac
aagtacgtggttcacctgacggagccggcctacagctacctgctgcgctacctgcagagt
gaggacaacagctccctctgcagggccctgagcacacacctgcaggtggaggtcaccgcc
tcgaggcgcacagactaccagctgtatggagcggccggcggggcgaccgccgccccgaac
tccacctcctcctgggccggggtggacggggcggagggtggcgagggggtggaggtccct
gcagggatcccacagagcgaggcggccctggagactctgcaggactgcatcaagaaggtc
cgcgaggggccccccacgctcaccaccgtgtgtttttacgccttccaccacacggagcag
acgttgaacaccgcggaggtctcggccgacagtcggctgctggccgccggctttgacagc
tccacggtgaaactgtggagcctccgggccagaaagctgaaggccaaaccgcatcaggct
gacgtgtcgctcatccaccttgcctgtgacgtactggaggaggaagcggatgaagaggac
ggctccggcagcgaggtaaagacgctgcgaggtcacagcggcccggtgtttcgcaccgcc
ttcctgacggacagctccggcctgctctcctgctctgaggacacgaccatccgctactgg
gacctgggcagcttcaccaacacggcgctctaccagggccacgcctacccggtgtgggac
gtggacgtcagcccctgcagcctttacttcgccagcggctcccacgaccggacggcccgc
ctctggacgttctcccgcacctacccgctgcggctctacgccgggcatctcgccgacgtc
gactgcgtcaaattccaccccaactccaactacctggccaccggctccacagacaagact
gtccggctgtggagcacccagcagggagcgtccgtccgcctcttcaccggccaccgcggc
cccgtgctgtcgctcgccttctcacccaatgggaagtacttggcgtccgccggcgaggac
cagagggtgaagctgtgggacttggcatcggggacgttgttcaaagacctgcgaggacac
acggacagcgtcaccagcctgtccttcagcccggacagcagcctggtggcgtcgtcctct
atagacaactcggtccgggtgtgggacatccgcaactcccacggagggacgccagccgac
ggctcgtccggcgagctggtgggactttacactggaaacaccagcaacgtgctgaacgtc
cagttcatggcctgcaacctgctgctggtgacggggactgcacaggagaaagcagaacag
tag

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