Cebidichthys violaceus (monkeyface prickleback): 137885640
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Entry
137885640 CDS
T10484
Symbol
col13a1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cve00536
]
137885640 (col13a1)
Glycosaminoglycan binding proteins [BR:
cve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137885640 (col13a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
137885640
NCBI-ProteinID:
XP_068584076
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All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MGIPGRMGLKGQAGEKGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKSGQNGPK
GDMGQRGVKGLPGEPGPKGEKGVCGDYTHRGLFVQDLPLKTLAALRSSQALMLKGEPGAQ
GPPGPPGPPGLPGTPGLNGASGPMGKPGEPGKPGKDPRLLPGLKGEPGVPGQKGDQGDVG
PLGPEGSKGVAGDHGIKGDEGKRGFPGERGEKGERGFPGASGLKGQAGLHGTPGIPGKRG
YRGERGDARVAAKGIKGEPGSPGLPGLMGIKGDAGDKGDKGEAGPEGLSGPRGPPGPTGE
PGKAEIHNNENDIRNIPLMGPPGLPGPSGAPGLPGTKGEVGLPGPPGLDGDKGPRGKPGE
PGPGGPAGPEGPRGEGGVMGFSGPKGDKGDMGPSGSPGLDGPTGEKGATGAPGPIGLPGS
MGPKGELGEGGRSEMVYGPPGPSGPPGPVGPAGSQGFSGPKGEPGIGIRGEKGASGQKGD
KGDRGHLGLPGAHGLDGRPGPVGLIGPAGVSGPAGPKGERGEKADTGLPGPIGPQGIPGL
VGPQGLKGNRGERGKKGNRGAKGDKGDQGAPGLDAPCPLGDDGLPVPGCWNKGQHPFQLA
KK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggggattcctgggagaatgggcttaaaaggacaagcaggggagaagggagcaccaggc
gagccaggtctgtctatcatcggtccaagaggacctccgggacaacctgggacaagagga
tttccaggctttccaggccccattgggttggatggcaagtctggacagaacggaccgaag
ggagacatgggtcagcgtggcgttaaaggactcccgggggaacctggacccaaaggggag
aagggcgtatgtggagactacacacaccggggcctctttgtgcaggacctccctctgaaa
accctggctgccttgcgctccagtcaggctctgatgttgaagggtgagcctggagcgcag
ggacccccgggacctccaggaccccccggactcccagggacccccggcctgaatggagcc
agcggcccgatgggtaagcctggtgaaccaggaaaaccaggaaaagacccacggctctta
ccgggactgaagggggagccaggtgtgccgggacaaaagggggatcaaggtgatgttggc
ccactcggccctgaaggctcaaagggagttgcgggagaccatggaattaagggagatgaa
ggaaagaggggtttcccaggagagaggggagagaagggagagcgaggtttcccgggagct
tctgggttaaagggccaggctggcctccacggtacccctggcatcccaggcaagaggggc
tacaggggtgagaggggagacgcgagggttgcagccaaggggattaaaggagaacctggt
tcaccaggactgccgggcctaatgggaatcaagggtgacgcgggtgataagggagacaag
ggggaagcaggccctgaaggcctctctggacccagaggtcctccaggcccaactggggag
ccaggaaaggctgaaatccacaacaatgaaaatgatattcgcaacatacccctgatgggc
ccccctggattacctggaccttcaggggcccctggactccctggtaccaagggtgaagtt
ggtctgccaggtcctccaggactggacggagataaggggcccagggggaagcctggagag
cccggtcccggaggcccagccggtcctgaaggtcccagaggggagggcggtgtcatgggt
ttctctggacccaaaggggacaagggagacatgggtccatctggatcacctggtttagat
ggccctacgggtgaaaagggggctacaggggcccctggccctattggattacctggctca
atgggtcctaaaggtgaacttggagaaggaggaaggtcagaaatggtctatggacctcca
gggccctcaggacctccaggaccagttggcccagcaggatctcaaggattttcagggcct
aagggagaaccaggcatcggcatcagaggagaaaagggagcgtcgggtcagaagggcgac
aagggcgacagaggccatcttggactccctggggctcatgggttagacggcagaccgggt
ccagtgggtctcataggaccagcaggtgtgtcagggccggcaggaccaaagggggagaga
ggtgaaaaggcagatacaggattgccaggaccaattgggcctcaaggcatccctggttta
gttggaccacaaggactcaaagggaaccggggagagaggggcaagaaaggcaacaggggg
gccaaaggggataagggagaccaaggagcacctggattagatgccccctgtccgttggga
gacgatggcctacctgtaccgggatgttggaataaaggtcaacatccgttccaactggct
aagaagtag
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