Cebidichthys violaceus (monkeyface prickleback): 137887523
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Entry
137887523 CDS
T10484
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cve04515
]
137887523 (pcdh17)
Cell adhesion molecules [BR:
cve04515
]
Cadherins
Protocadherins
137887523 (pcdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
137887523
NCBI-ProteinID:
XP_068586691
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MYLSIFFFLLLWAQALTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQVGPGGKKANFRV
LENSAPHLIDVDPQSGLLYTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQDIN
DNSPIFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVKSR
GDGTKFPELVIQRPLDREERNHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFDQP
SYIVEIPENSPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSIDSRTGVIKIQ
GEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEAAP
PGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREVQDEFNVT
IVAKDNGIPPLNSTKSFTVKILDENDNVPRFTKSVYLLQIPENNIPGEYLGSVLAHDPDL
GQNGTVYYSIVNSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLARDAGSPH
LESNATVRISVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGESGR
LTYEISDGNEEHLFEIDPVTGEVRTAHPFWDDVNPIVELIIRVSDHGKPTLTAAARLIIK
ASNGRPPDGLPRTKDNQNWDMSLPLIVTLSIISIMLLAAMVTIAIKCKRENKEIRTYNCR
IAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRLP
LSSPRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTSTTDTPTNRMSIIQTDNFPTEPNY
MGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKATGV
KPPPLEQDEDCVNCTEECRVLGHSDRCWMPQFPAGGNQAEGVDYRNNMFVPAGMETVPET
ETYETVNPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASSSPTKGCS
TMSPCSSVKSPADGAEGKPPPATCSGHYGPPDGQYLSPTKQSRDQGVYPPLPPSDPVAKV
LAEARSRISQEAAGEMECVLEQVEPDANRDRMDADQVVRDIDKLLQDCRGSEATGTLRK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttctttttcctcctgttatgggctcaagccctgacattgaaaaac
ttgaattactctgtcccggaggaacagggtccggggacagtgattgggaacattgccaaa
gatgccagactcggactcgaacaggttgggccgggaggtaagaaagccaacttcagggtg
ctggagaactcggctccgcatctcatcgacgtggacccccaaagcggactgctgtacacg
aagcagcgcatcgacagggaaaccttgtgtaagagaaaccccaagtgccagctctccatg
gaggtgtttgccaatgacaaggagatctgcatgatcaaaatagatattcaggacattaac
gacaactcaccgatcttcccctcggaccagattgatattgacatttctgaaaatgcagtg
ccagggacacgctttcccctgaccagcgcccatgacccagatgcaggggagaatggcctg
aaaacctatcaaataacacgcgatgactacaatctcttttccttggaggtaaagtcccgt
ggggacgggactaaattcccagaattagttattcaacggccattggaccgagaagaaaga
aaccatcacacccttattttgtctgccacagatgggggggaatatcctcggtcaggtacc
atgcagataaatgttaaagttattgattccaatgataacagccctgtgtttgatcagccc
tcctatattgtggaaattcctgaaaattcacctccaggtaaagtgctcatcgatttaaac
gccactgatcctgatgagggcaacaatggacaagtagtctattcttttagtggctatgcc
ccagagagaatccgggagctcttttccatagattccagaacaggggtcataaagattcaa
ggtgaaattgactacgaagagagcccagttattgagattgacgtccaggctaaggatcta
ggtcccaatccaatcccaggccattgtaaagtcactgttaaagtgctggacaggaatgat
aactggccgtctataggctttgtgtctgtaagacagggagccatcagcgaggcagcacct
ccaggcactgtcattgctctggttcgtgtcacagacaaggactcaggcaggaatgggcag
cttcagtgcagagtactgggtaatgtcccttttaaacttgaggagaattatgataacttc
tatactgtggtgacagacagaccgttggacagagaggtgcaggatgagttcaatgtcacc
atcgtggccaaagacaacggcattcctcctctaaactccacaaagtctttcactgtcaag
attctggatgagaatgacaatgttcctcgctttaccaagtccgtttaccttcttcaaata
cctgagaacaacatccctggagagtacctcggttcagttctggcacatgacccagacctc
ggccagaacggcacagtgtactacagcatagtcaactccaatgtgagtgggggtgatgtc
aacacctacgttaatgtcaatgctgcaaatggagccatctatgcagtgagatctttcaac
tatgagcaaatcaaatattttgacttcaaggttcttgctagagatgcaggatctccacac
ctggagagcaatgctacagtacgcatcagtgttctggatgtcaatgacaacatccccgtt
atagttctgcccctgctcctaaacgacaccgctgaaatccatgtgccgcgcaacgttggc
gttggctacattgtcaccacagtgagggcggtggataatgactatggcgagagtgggagg
ctcacatatgagatctctgatggtaatgaggagcacctctttgagattgatccagtgacc
ggggaggtgcgaacagcccacccattctgggacgatgtgaaccccattgtggagctgatc
atccgagtatctgaccatggcaagccaacgctcactgccgccgccaggctcatcatcaag
gcatccaacggacgtcctccagacggactgccgcgcacaaaggacaatcagaactgggac
atgtcccttcctcttattgtaactctaagcatcatatccatcatgcttctggcagccatg
gtgaccatagcaatcaagtgcaagcgagaaaacaaggagatccgtacctacaattgtcgc
attgcagagtactcgcaccctcagctcgggaaaggcaagaagaagaagattaacaagaac
gacatcatgctggtgcagagcgaggtggaggagcgggatgccatgaatgtgatgaatgtg
gtaagcagcccttccttggccacctctcccatgtactttgactaccagacacgcctgcca
ctcagctcaccaaggtcagaggttatgtacctcaagcccactgccaataacctcagcgtg
ccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcactacagac
acacctactaaccgcatgtccatcatacagacggacaatttccccactgagcctaattat
atgggtagcagacaacagtttgttcaaagtagttcgacattcaaagacccagagcgagca
agcctcagagacagtggtcatggtgacagtgaccaggctgacagcgaccaggacaccaac
aaaggctcctgctgcgatatgtctgcaaaggaagccctcaagttgaaggctacaggcgtg
aaaccaccacctttggaacaagatgaggactgtgtgaattgtacggaggagtgccgggtt
ctgggtcattctgaccgctgctggatgccccagttccccgctggaggaaaccaggcagaa
ggtgtcgactaccgcaacaatatgttcgtaccggcgggcatggagaccgtgcctgagaca
gagacctacgagaccgtcaaccccaatggcaagaagacgttctgtacgtttggaaaagag
aggcgtgaccacaccatcctggtcgccaatgtcaagccctacttgaaggcgaaacgagcc
ctcagtccactgctccaagaggtcccttcagcctccagcagtcccaccaagggctgctcc
accatgtctccctgctcttcagtcaaaagcccagccgacggagctgaaggcaaaccgcct
cccgccacctgctccggccactacgggcctcctgatggtcagtacctgtcaccaaccaaa
caaagcagagaccagggggtctacccacccttgcctccctcagacccagtggccaaggtg
ctcgcagaggcccgctctaggatcagccaagaggccgcaggggaaatggagtgtgttctg
gagcaggtggagcccgacgcgaaccgcgatagaatggacgctgaccaggtggtgagagac
atcgacaaactattgcaggactgcagaggaagcgaggccactggaacactcaggaagtga
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