KEGG   Cebidichthys violaceus (monkeyface prickleback): 137888142
Entry
137888142         CDS       T10484                                 
Symbol
copa
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
cve  Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:cve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cve04131]
    137888142 (copa)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cve04147]
    137888142 (copa)
Membrane trafficking [BR:cve04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    137888142 (copa)
Exosome [BR:cve04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   137888142 (copa)
  Exosomal proteins of bladder cancer cells
   137888142 (copa)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 TPR_COPA_B Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_WDR90_POC16_2nd WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 137888142
NCBI-ProteinID: XP_068587568
LinkDB
Position
Unknown
AA seq 1221 aa
MLTKFETKSARVKGLSFHPKRPWVLASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRIW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVETD
VRGISGVDLFGASDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH
PNLNLFAAGHDSGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG
SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPKESDSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK
RSLATVKIAKVKYVVWSADTSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLTIDPTEYRFK
LALVNRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV
ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLAKLRKMM
KIAEIRKDMSGHYQAALYLGDVSERVRILKNCGQKSLAYLTAATHGLDEEAEALKETFDP
EKETVPEVDPNAQLLQPSPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMAADVDMEAA
GGEGWGDDAELQLDEDGFMDAQEGSGEEGGKEEGGGWEVEEDLDLPPELDMPAGAGGGAE
DGFFVPPTKGMSPTQMWCNNSQLPVDHILAGSYETAMRLLHDQVGVVSFEAYKSLFMQTL
SRGRTCYLGLPSLPCLRSQPQRNWKDCGAKQGLPAVGLRLSDLIARLQQCYQLTTSGRFE
EAVERFRVILLSVPLLVVDNKQEIAEAQQLITICREYIVGLTMETERKKLPKDTLDQQKR
LCEMAAYFTHCNLQPVHMVLVLRTALNLFFKLRNFKTAASFARRLLELGPKPDVAQQTRK
ILAACEKTLTDAHQLNYDPHNPFDLCAASFVPLYRGRPVEKCPLSGACYCPTYKGQICRV
TQVTEIGKDVIGLRVSPLQFR
NT seq 3666 nt   +upstreamnt  +downstreamnt
atgttaacaaaatttgaaacaaagtcggcccgtgtcaaaggcctgagtttccatccgaag
aggccatgggttcttgcaagtttgcacaacggagtgatccagctgtgggactaccggatg
tgcaccctgattgacaagtttgacgagcatgatggtcccgtcagagggattgatttccac
aagcagcagcctctgtttgtgtctggaggagatgattacaaaatcaaggtgtggaactac
aaactgaggcgctgcctcttcactctgcttggacaccttgactacatcagaactaccttc
ttccaccatgagtacccctggattctgagcgcctcagatgaccagactattcgcatctgg
aactggcagtcaaggacctgcgtctgtgtgctgaccggccacaatcactatgtgatgtgc
gcccagttccacccatctgaggacctggtggtgtcagccagtctggaccagaccgtgcgt
gtgtgggatatttccggtctgaggaagaagaacctgtctccaggcgctgtggagacagat
gtgcgcggcatctctggtgttgacttgttcggtgcctcggatgctgttgtcaagcacgtc
cttgagggtcacgaccggggggtcaactgggctgccttccaccccaccatgcccctcatt
gtgtctggagctgacgacaggcaggtcaagatctggagaatgaacgaatccaaggcgtgg
gagctggatacgtgccgcggtcactacaacaacgtgtcctgtgccgtcttccacccgcgc
caggagctcatcctgtccaactccgaggacaagagcatccgggtgtgggatatgtccaag
aggaccggagtgcagaccttccgccgggaccacgaccgcttctgggtgctgggggctcac
ccgaacctcaacctgttcgctgctggtcacgacagcggcatgattgtgttcaagctggag
cgcgagcgtccggcatacgccgtgcacggaaacatgctgtactacgtcaaggaccgcttc
ctccgccagctggacttcaacagcagcaaggacactgctgtcatgcagctacgcagtggg
tcgaagttcccggtgttcagcatgtcttacaacccagctgagaacgctgtcctgctctgc
actagggcgaccaacctggagaacagcacctatgacctgtactctattcccaaagaaagc
gactctcagaaccccgatgcaccggaggggaagaggtcctctggtctgactgcagtctgg
gtggccaggaacaggtttgccgtcctggaccgtatgcactctctgctgatcaagaacctg
aagaatgaaattgtgaagaaagttcaggtgccgagctgcgaggaaatcttctacgccggg
acgggctcgctgctgctgcgcgacgccgacggcgtcacgctgttcgacgtgcagcagaaa
cgctctctggccaccgttaagatcgccaaggtgaagtacgtggtgtggagcgccgacacc
agccacgtggctctgctggctaaacacgccatcatgatctgcaaccgcaagctggagagt
ctttgcaacattcacgagaacatccgagtgaagagtggagcctgggacgagagcggagtc
ttcatctacaccacctccaaccacatcaaatacgccctcacctctggtgatcacggcatc
atcaggaccctggacctgcccatctacgtgacccgcgtgagaggaaacagtgtttactgt
ctggacagggagtgcaggccgcgcgtcctcaccatcgaccccacagagtaccgcttcaaa
ctggccctggtcaaccgtaaatatgacgaggtcctccacatggtgcgtaatgccaagctg
gtgggccagtccatcatcgcctacctgcagaagaagggctaccctgaggtggcgctgcac
tttgtgaaagatgagaagactcgctttagtctggctctggagtgtggaaacatcgaggtt
gctctggaggcggccaaggctttggatgagcgcagctgctgggagcgtctgggtgaggca
gcgctgctgcagggtcaccaccaggtcgtggaaatgtgctaccagaggaccaagaacttt
gacaagctcaccttcctctacctcatcaccggcaacctggccaagctgcgcaagatgatg
aagattgctgagatcaggaaggacatgagtggtcactaccaggcagctctctacctggga
gatgtcagtgagagggtccgcatcctcaagaactgtggacagaagtctctggcttacctg
actgctgccactcatgggctggacgaagaggccgaggcgctgaaggagacctttgaccca
gaaaaggagacggtgccggaggttgatcccaatgcacagctgctgcagccttctccaccc
atcaaccctctggacaccaactggcctctgctcactgtgtcaaagggcttctttgaggga
gccattgcggcgaaggggaaggcaggtcagatggctgccgacgtggacatggaagccgca
ggaggagagggctggggagacgatgccgagcttcagctggatgaagatggtttcatggat
gctcaggaaggatcaggggaagaaggtgggaaagaggagggaggaggctgggaggtggag
gaagacctggaccttcctccagagctggacatgccggctggtgcaggtggaggagcagaa
gacggcttcttcgtcccaccgaccaaaggaatgagtcccacacagatgtggtgcaacaac
tcccagctgccggtggaccacatcctggctggctcttacgaaactgctatgagattgctc
cacgaccaggtaggagtggtgagcttcgaggcctacaagtcgctgttcatgcagaccctg
tccagaggccgcacctgttacctggggctgccctccctgccctgcctgcgtagccaaccc
cagagaaactggaaggactgtggcgccaagcaaggattgcctgctgtgggcctgcgcctc
tccgacctcatcgcccgcctgcagcagtgctaccagctgactacatccgggcgtttcgag
gaagctgtcgagcgcttcagagtcatcctgctgtctgttcctctgctggtggtggataac
aagcaggagattgcagaggctcagcagctgatcacaatttgcagagagtacattgtgggt
ctgaccatggagacggagaggaagaagctgcctaaagacacattggatcagcagaagagg
ctgtgtgagatggctgcttatttcacccactgtaatctccagccggtccacatggtgctg
gtgttgcgcacagctctgaacctcttcttcaagctgcgcaacttcaagacggccgccagt
tttgctcgtcgcctgctcgagctggggccgaagccggatgttgcacagcagacccgcaag
attttggcagcctgtgagaagaccctgaccgacgcccaccagttgaactacgacccccac
aatccgttcgacctgtgcgccgcctcttttgtccctctgtaccgcggacgtcctgttgag
aagtgccctctgtccggagcctgctactgccccacgtacaagggccagatctgcagggtc
acacaggtgacagagatcggtaaggatgtgatcggtctgcgtgtgagtccacttcagttc
cgttaa

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