Cebidichthys violaceus (monkeyface prickleback): 137888374
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Entry
137888374 CDS
T10484
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137888374 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137888374 (ddx46)
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137888374 (ddx46)
Spliceosome [BR:
cve03041
]
Complex A
U2 snRNP components
U2 related factors
137888374 (ddx46)
Complex B
137888374 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
137888374
NCBI-ProteinID:
XP_068587867
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MGRESRHYRKRSTSRGRSGSRSKSRSPDKRSKKDDRDRTRRERSRSRDRRRSRSRDRKRV
RRSRSRERRRSRSRDRRRSGSRSRARRSRSGSPSKSRRPDEKSRSKEKDNVDPLSEKKKV
KEEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKRELEEMKQGKK
WSLEDDEDDDEDTSAPMEGDDDEDGEGKEESEEKEIKEEKKEEEEEEEEEKEKESETPME
QQAEEDDVDPLDAYMEEVKQEVKKFNMGAMKGNDKKGAMTVTKVMTVVKTKKGPNTHKKK
GELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHGKIQYETYRRNFYVEVPE
LARMTPEDVNAYRLELEGITVKGKGCPKPIKTWVQCGVSMKILAAMKKHGYDKPTPIQAQ
AIPAIMTGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQI
TKECKKFSKQLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLR
RATYLVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILGKPIEV
QVGGRSVVCSDVEQHVLVIEEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADTLLKDLMK
ASYPCMSLHGGIDQYDRDSVINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYE
DYVHRAGRTGRAGNKGFAYTFITEDQVRYAGDIIKALELSGSSVPPELEQLWASFKDQQK
AEGKTIKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMF
NSKKRVKDLSAPGSATGPAGAAASSAAVPGGMPGLGPPSAGNIQKLEMAKRLALKINAQK
NLGAEAQDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAA
EQAETVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGE
RKIYLAIESANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtcgagacactacaggaagcggtccacgtctcggggtcgttcaggcagc
cgatccaagagtcgatcaccggacaaacgatccaagaaagacgaccgagaccggaccagg
agggagcgctcgcggagccgggaccgccgcaggtcccggtccagagacaggaaacgagtc
aggcgctccaggagcagagagaggaggaggtccagaagccgagacaggaggaggtccggc
agcaggagccgagcacggaggtccaggtctgggagccccagcaagagcaggaggccggat
gaaaagtccaggagcaaggagaaggacaacgttgatcctttatccgaaaagaaaaaggtt
aaagaggagaaggaggatgagaaggtggaggatcaagactttgaccagaacaagctggag
gaggagatgaggaagaggaaggagcgcgtggagaagtggagggaagagcagaggaagaag
gccatcgaaaacatcggagagatcaagagggagctggaggagatgaagcagggcaagaag
tggagcctggaggatgacgaagacgacgacgaggacacttccgctccgatggagggagac
gacgacgaagacggggaagggaaggaggagagtgaagagaaggagataaaggaggagaag
aaagaagaggaagaggaggaggaggaggagaaggagaaagagagcgagaccccgatggag
cagcaggccgaggaggatgacgtggaccccctggacgcctacatggaggaggtgaaacag
gaggtgaagaagttcaacatgggagccatgaaaggaaacgataagaaaggagcaatgacg
gtaaccaaagtgatgacagttgttaaaaccaagaaaggacccaacactcacaagaagaag
ggcgagctgatggagaacgaccaggacgctatggaatactcgtcggaggaggaggaggtg
gatctgcagacggctctgacgggctttcagaccaaacagaggaaggtgctggagcccgtt
gaccacggcaagatccagtacgagacgtaccgcagaaacttctacgtggaggtccctgag
ctcgccaggatgactccagaagacgtgaacgcctacaggctggagctggaaggcattacg
gtcaaagggaagggctgtcccaaacccatcaagacctgggtgcagtgtggcgtgtcgatg
aagatcctcgccgctatgaagaagcacggctacgataagcccaccccgatccaggcccag
gccatccccgccatcatgacgggccgagacctcatcggcatcgctaagaccggcagcggg
aaaaccatcgccttcctgctgcccatgttccggcacatcatggaccagaggcccctggag
gagtccgagggaccaatctctgtgatcatgactcccaccagagagctggctctgcagatc
accaaggagtgtaagaagttctccaagcagctgggactcagggtggtgtgtgtttatgga
ggcacgggcatcagcgaacagatcgctgagctgaagagaggcgctgagatcatcgtgtgc
acaccgggcagaatgatcgacatgttgggggccaacagcggtcgagtcaccaacctgcgc
agagctacgtatctggtgttggacgaagcagacaggatgttcgacatgggctttgagcca
caggtgatgcgcatcgtggacaacgtgcgtccagaccgccagaccgtcatgttctcggcc
accttccccagagccatggaggcgctggctcgtaggatcctgggcaagcccatcgaggtc
caggtgggaggccgcagtgtcgtctgctccgatgtggagcaacacgtgctggtgatagaa
gaggacaaaaagttcctgaagctgctggagatcctgggtcactaccaggagaagggctcg
gtcatcatctttgtggacaaacaggagcacgcagacacactgctgaaggacctgatgaag
gcctcgtacccctgcatgtccctgcacggaggaatcgaccagtacgacagggacagcgtc
atcaacgactttaagaacggagcgtgccgtctgatggtggccacctccgtggcggccaga
gggctggacgtcaagcagctgatcctggtggtcaactacaactgtcccaaccactacgag
gactacgtccacagggccgggcgcacaggccgagcaggcaacaagggcttcgcctacacc
ttcatcacggaggatcaggttcgctatgctggagatatcatcaaagctttggagctgtcc
ggctcttctgtgccgcctgaactggagcagctttgggcctccttcaaagaccaacagaaa
gcggagggtaagaccattaagagcagtagcggattctcaggaaaaggcttcaagtttgac
gagaccgaacacgctttggccaatgagagaaagaagctgcagaaagctgctctcggactg
caggactctgacgacgaggacggagcgctggatatcgaggagcaaatcgagagcatgttc
aactccaagaagagggtgaaggatctgtcggctcccggatcggccaccggtcccgcggga
gcagccgcctcctcggcggcggtccccggagggatgccgggcctcgggcccccatctgct
ggaaacatccagaaactggagatggccaagaggctggcgctcaagatcaacgctcagaag
aacctgggcgccgaggctcaggacgtgatgcagcaggccaccaacgccatcctccggggc
ggcaccatcatgacgccctcggtgtcggcgaagaccatcgcggagcagctggcggagaag
atcaacgccaagctgaactacacccccgtggagaagctggaggaggagcggcaggcggcc
gaacaggccgagaccgtcaagagatacgaggaggagctggagatcaacgacttccctcag
acggccaggtggaaggtgacgtctaaagaagctctgcagaggatcggtgaatactctgaa
gccgccatcaccatcagaggaacctatttccctccaggcaaagagcccaaggagggggaa
cgcaagatctacctggctattgaaagtgcaaatgaactggctgtgcagaaagccaaaacg
gagattactcggttaatcaaggaggagctgatcagattacaaaattcgtaccagccgacg
agcaaaggccggtacaaagtgttgtag
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integrated database retrieval system
