Cebidichthys violaceus (monkeyface prickleback): 137890193
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Entry
137890193 CDS
T10484
Name
(RefSeq) polyadenylate-binding protein 1A-like
KO
K13126
polyadenylate-binding protein
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03015
mRNA surveillance pathway
cve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137890193
09123 Folding, sorting and degradation
03018 RNA degradation
137890193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cve03019
]
137890193
03041 Spliceosome [BR:
cve03041
]
137890193
Messenger RNA biogenesis [BR:
cve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137890193
mRNA cycle factors
Stress granule specific factors
137890193
Spliceosome [BR:
cve03041
]
Complex C
Other components
Complex C specific factors
137890193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_5
RRM_10
RRM_occluded
RRM_7
RBD_RDR6
RRM_3
YflT
HTH_58
Motif
Other DBs
NCBI-GeneID:
137890193
NCBI-ProteinID:
XP_068590426
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYVKNFGEDINEEKLRDVFSKYGNAMSIRVMADDSGKSRGFGFVSFER
HEDAQKAVDELNGKEFNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMTRYQGVNLYVKN
LDDGIDDERLRKEFTPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQAQNRA
AYYQAAGQMAQLRPSPRWATQGVRPQHFQNMPGAMRPSAPRPQTFGAMRPTSQVPRMMSA
QRVAQTMGPRPAVAAAAAGVPVRGVPQYKYAAGVRNPQQHIPAQPQVPMQQPAVHVQGQE
PLTASMLAAAPPQEQKQMLGERLFPLIQNMHPSLTGKITGMLLEIDNSELLHMLESPESL
RSKVDEAVAVLQAHQAKEAAQKTVTNSVGVPSV
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccagtgctcccagttaccccatggcttcactgtacgtcggggatctgcatcaa
gatgtgaccgaggccatgctgtacgagaaattcagcccagccggagctatcctatcgatc
cgggtctgtagggacatgattacccggcgttccctgggatatgcttatgtcaactttcaa
cagccagcggacgccgagcgtgcactggacaccatgaactttgatgtgatcaagggacgg
cctgtgcgcatcatgtggtcgcagcgggatccgtcactgagaaagagcggcgtgggaaac
atcttcattaagaatcttgacaagtccattgacaacaaggctctgtatgacaccttctct
gcatttggaaacatcctgtcgtgcaaggtggtttgtgacgagaatggctctaaaggctac
ggctttgtgcattttgagactcaggaggccgccgaacgagccattgagaaaatgaatggc
atgctgctcaatgaccgaaaagtattcgtgggtcgcttcaaatctcgcaaagagcgcgag
gctgagctgggtgcccgagccaaagagttcacaaatgtctacgtcaaaaacttcggtgaa
gacataaatgaagagaagctgagggatgtcttcagtaaatatggaaatgcgatgagtatc
cgggtcatggcggatgacagcggaaagtctcgaggcttcgggttcgtcagctttgaaagg
cacgaggacgcccagaaggcagtggatgagctgaacgggaaggagttcaacggcaagctc
atctacgttggccgcgcccagaagaaggtggagcgacagacggagctcaagcgcaaattt
gagcaaatgaaacaagaccgcatgactcgctaccagggtgtcaacttatacgtgaagaac
cttgatgatgggattgatgatgaacgtctgcgaaaggagttcacaccgttcggcaccata
accagtgccaaggtcatgatggaggggggacgcagcaaaggtttcggctttgtctgcttt
tcgtccccggaggaggccacgaaagcagtgacggaaatgaacgggcgcatcgtagcgacc
aagccactgtacgtggccctggcccagcgcaaagaggagcgtcaggcccacctgaccaac
cagtatatgcagcgcatggccagtgtgcgtgcggtgcccaacccagtcatcaatccctac
cagccagccccgccctctggctacttcatggcagccatacctcaggcccagaaccgcgcc
gcttactaccaagctgctgggcagatggcccagctccggccaagcccgcgctgggccacc
caaggtgtcaggccacaacacttccagaacatgccgggtgctatgcgtccctcagcaccg
cgccctcagaccttcggcgccatgcggccgacctcccaggtgccccgcatgatgtccgcc
cagcgtgtcgctcagaccatgggcccccgaccggctgtcgcagctgcagcagcaggtgtt
cctgtgcgcggagtccctcagtacaaatatgccgcgggagtccgcaatccccagcagcac
atacctgctcagccacaagtccccatgcagcagcctgctgtccatgttcagggacaggag
cctctgacggcctccatgctggcagctgctccaccacaggaacagaagcagatgctgggt
gaacgtcttttcccactcatccagaacatgcacccaagcctgactgggaagatcaccggt
atgttgctggaaattgacaactcggagcttctccacatgctggagtccccagagtctctc
cgctctaaggtggacgaggcagtggctgtgcttcaagcccaccaggcaaaggaggccgcc
cagaagactgtgacgaattcagttggtgtcccgagtgtctga
DBGET
integrated database retrieval system
