Cebidichthys violaceus (monkeyface prickleback): 137890262
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Entry
137890262 CDS
T10484
Symbol
prkn
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04120
Ubiquitin mediated proteolysis
cve04137
Mitophagy - animal
cve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137890262 (prkn)
04120 Ubiquitin mediated proteolysis
137890262 (prkn)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
137890262 (prkn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cve04131
]
137890262 (prkn)
04121 Ubiquitin system [BR:
cve04121
]
137890262 (prkn)
03029 Mitochondrial biogenesis [BR:
cve03029
]
137890262 (prkn)
Enzymes [BR:
cve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
137890262 (prkn)
Membrane trafficking [BR:
cve04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
137890262 (prkn)
Aggrephagy
Other aggrephagy associated proteins
137890262 (prkn)
Xenophagy
Other xenophagy associated proteins
137890262 (prkn)
Ubiquitin system [BR:
cve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
137890262 (prkn)
Mitochondrial biogenesis [BR:
cve03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
137890262 (prkn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR_1
ubiquitin
IBR
Motif
Other DBs
NCBI-GeneID:
137890262
NCBI-ProteinID:
XP_068590526
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MIVYIRYNLGPGVPVELQEEASVAELKELVGTQQGVRPELLRVLFAGRELRSSFTLQGCD
LPEQSTVHVVLPPSGSSSAQLLLLQERLVRGGEDKPESLAWLDLTSSRLPSTSSGLAVIL
EGSDGIGGEGAGGRAEEAGEEAGEDVQAASVRTCSTFFVYCKSCRSVQPGKLRVCCSSCR
QTTLTLSRGPSCWDDVILPGRVHGLCQSDGCHGNEAAFYMKCASHPTSENEVSVSLDLIM
TNRRDVPCIACCDITDVVLVFQCSERHVICLDCFHVYCQTRLNERQFVSHPLIGYSLPCA
AGCTDSLIKELHHFRILGDDQYGRYQQYGAEECLLMIGGLMCPSPGCGAGLIPPDGSRKV
LCDGQLGCGFVFCRDCREGFHEGACLIEQAPPTAEASQGFLVAEEASLRGRWDQASLLLL
QESTKRCPQCRVPVERDGGCMHMQCPLCRAEWCWICGVSWNLDCMENHWFG
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtatatccggtataacctgggccccggtgtgcccgtggagctccaggaggag
gcgagtgtggccgagctgaaggagctggtggggactcagcagggagtccgtccggagctc
ctcagggtgctgtttgctgggagagagctgaggagcagcttcacactacagggttgtgac
ctcccggagcagagtaccgtccatgtcgtcctccctccatcaggttcctcctctgcccag
cttctcctcctgcaggagcgcctggttcgaggaggggaggacaagccagagagtctggcc
tggctcgacctcacctcctcacgcctcccttccacctcctccgggctggcagtgatcctg
gaggggagtgatgggataggaggggaaggagcaggtggacgagcagaggaggcaggagag
gaggcaggagaggacgtgcaggctgcaagtgtgcgtacctgcagtactttctttgtgtac
tgtaagagctgcaggtcggtccaaccaggaaagctgagagtctgttgcagcagctgtcga
caaacaacgctgacactcagcaggggtccgtcctgttgggatgatgtcatccttccaggt
cgtgtccatggcttgtgtcaatcagatggttgtcacggcaacgaagcggcgttctacatg
aagtgtgcgtcccatccgacctcagagaatgaagtctctgtgtccctcgacctcattatg
accaacagaagagacgtcccctgtatcgcctgctgtgacatcacggacgtggtcctggtc
ttccagtgttcagagcgtcatgtgatctgtctggactgtttccatgtctactgtcagact
cgtctcaatgagagacagtttgtttctcaccctctgattggctactcgctgccgtgtgcc
gccggctgcaccgactctctcattaaagagttacatcacttcaggattctaggagacgat
cagtatgggcggtaccagcagtacggggcggaggagtgtctgctgatgattggaggactg
atgtgtccgtcacctggctgtggggcggggcttatcccacctgacggcagcaggaaggtg
ctttgtgacggacagctcggctgtggcttcgtcttctgcagagactgcagggaggggttc
catgagggggcgtgtctcattgaacaggccccgcccacagctgaagcctctcagggtttc
ctggtggcggaggaggcgtctctcagagggaggtgggatcaggcctccctgctgctcctt
caggagtcgactaaacgttgtcctcagtgtcgtgttcctgtggagagagacggtggctgt
atgcacatgcagtgtcctctgtgcagagccgagtggtgctggatctgtggagtctcctgg
aacctggactgtatggagaaccactggttcggatga
DBGET
integrated database retrieval system
