Cebidichthys violaceus (monkeyface prickleback): 137890862
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Entry
137890862 CDS
T10484
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137890862 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cve03041
]
137890862 (dhx16)
Enzymes [BR:
cve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137890862 (dhx16)
Spliceosome [BR:
cve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137890862 (dhx16)
Complex C
U4/U6.U5 tri-SnRNP related factors
137890862 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
nSTAND3
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
137890862
NCBI-ProteinID:
XP_068591245
LinkDB
All DBs
Position
Unknown
AA seq
1052 aa
AA seq
DB search
MANLEQWVNDRLHDILGLSDRYVSQFMIGTARKASSSQDFVDRLEQTGTIDIEPSVVAFA
QELFDKIPRKQVVEKPARAMEREAIEMDKKNRTYTLLEDSDSDVEAVRETEKGKKKKDKD
RGNRRKHIRKKKESASSSEDEAPQRGKSGQGDPNSPKKEEEEEEWEKEERERQQDIEERD
AFAERVKLKDKDKTRNITERTDKKAYEEAQKRLKMAEDDQKNMLPELRKRSRWDYLKKRE
AEKLEDLEAEINDDEYLFHTEELTEREKKELDYKRTLRDLAKDYKKAGAKEHEERKNRYY
MPEEKRSKEVPQRDLELEESPMELGGEQGRWEEERLKTASLSFGAKREREQGMRQEQDRY
QLILEEEEMIEFVSTAMTMKGTRTEQDQEALALSQAELKKQSMQEVRRSLPIFPYREDLL
AAISEHQILVIEGETGSGKTTQIPQYLLEDGYSNGGMKIGCTQPRRVAAMSVASRVAQEM
SVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVVIIDEAHERTLHT
DILFGLIKDIARFRSDLKVLVASATLDTERFSCFFDDAPVFRIPGRRFPVDIFYTKAPEA
DYLEACVVSVLQIHVTQPTGDVLVFLTGQEEIETCCELLQERCRRLGSKIAELLVLPIYA
NLPSDMQAKIFNPTPLGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNARTGMESL
IVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEESTVPEIQRTNLGNVVLLLKS
LGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMVL
ASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGDHLVLLNVYTQWL
ESGYSTQWCYENFIQFRSMRRARDVRDQLEGLMDRIEVEVVSSQGDSLPIRKAVTAGYFY
HTARLSKGGYKTVKHQQTVYVHPNSCLFEEQPRWLIYHELVFTTKEFMRQVIEIDSGWLL
EVAPHYYKSKELEDSSSKKMPRKQGKAKEELG
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggccaatctagagcagtgggtgaatgaccgtctccatgacatcctcgggttgagtgac
agatatgtgtctcaattcatgatcggcactgcgcggaaagcctcgagttctcaagacttt
gtggatcgcctcgagcagacgggcacgattgacatcgaaccgagtgtggttgcgttcgcg
caagagctctttgacaagattcctcgcaagcaggttgttgagaaacctgcccgggcgatg
gagcgggaagccattgaaatggacaagaagaatcggacttacacgttactggaggacagc
gacagtgatgtcgaggctgtgagggaaacggagaaagggaagaagaaaaaggacaaagac
agaggaaacaggaggaagcacatcagaaagaagaaagagagcgcgtcgtcgagtgaggac
gaagcgcctcaaaggggcaaatcaggccagggggaccccaattctcccaagaaagaagag
gaagaggaagagtgggagaaggaggagagagagcgacagcaggacatcgaagagagagat
gcgtttgctgagcgagtgaagctgaaagacaaagacaagacccgtaacataacagagagg
acggacaaaaaggcttatgaggaagctcagaagaggctgaagatggctgaagacgaccag
aagaacatgttgccggagttgaggaagcgctctcgctgggattatctaaagaagagagag
gcagagaagctggaggacctggaggcagagatcaatgacgacgagtaccttttccataca
gaggagctgacagagagggagaaaaaggagttggactacaaacgcaccctgcgggacctg
gccaaagattacaaaaaggccggtgccaaggaacatgaggagaggaagaacagatactac
atgccagaagagaagagaagcaaggaggtgccccagagggacctggagctggaggaaagt
cccatggagctgggaggagagcaaggccgctgggaggaggagaggctgaagacggcctcc
ctcagcttcggcgccaagagggagcgagagcaagggatgaggcaggagcaggataggtac
cagctgatcctggaggaggaggagatgatcgaatttgtcagcactgccatgaccatgaag
ggaactcggacggagcaggatcaggaggccctggctctgtcccaggcggagctgaagaaa
cagtccatgcaggaggtccgccgcagcctgcccatcttcccctacagagaggacctgcta
gctgccatcagcgagcaccagattctcgtcattgagggggagacgggctccgggaagacc
actcagatccctcagtacctcctggaagacggctactcaaacggaggcatgaagatcgga
tgtacacagcctcgcagagtggcggccatgtcagtggcgtccagagtggcacaggaaatg
agcgtcaagctcgggaatgaggtgggttacagtattcgttttgaggactgcacgtcagag
agaacagtgctcaagtacatgacggacggcatgctgctccgagagttcctcaccgagccc
gacctggccagctacagtgtggtgatcatagatgaagcccatgagcggacgctgcacaca
gacatcctgttcggtctgattaaggacatcgccaggttcaggtccgacctgaaggttctg
gtggccagcgccactctggacaccgagcgcttctcctgcttctttgacgacgcgcccgtc
ttcaggatccccggcaggaggttccccgtcgacatcttctacaccaaggctccagaggca
gactacctggaagcctgcgtggtgtcggtgctacagatccacgtcacccagcccaccgga
gacgtactggtcttcctcactggacaggaggagatcgaaacgtgctgcgagctgctccag
gagcgatgcaggcggctcggctctaagatagcagagctgctagtcctccccatctacgcc
aacctgccgtcggacatgcaggcgaagatcttcaacccgactccgctgggagcccgtaag
gtggtggtggctaccaacatagcagaaacctcgctgaccatagatggcatcatctacgtc
atcgacccaggcttctgcaaacagaagagctacaacgcccgcaccggcatggagtcgctc
atcgttacgccctgctcacgggcttcggccaaccagagagcaggccgtgcaggcagagtg
gctgctgggaaatgtttcaggctttacacagcctgggccttcaaacacgagatggaggaa
tcgacggtgcccgagattcagaggaccaacttggggaatgtagtcctgctgctgaagagt
ttaggcatcaatgacctgattcactttgacttcatggacccacctcctcatgagactctg
gtgttagcgctggagcagctctacgccctgggagcgctcaaccacctgggagagctcacc
aagctgggtcgcaggatggctgagctcccggtggaccccatgctgagcaagatggtcctg
gcctctgaacagtacaagtgttcagaggaagtgttgacgatagccgccatgctgtcagta
aacaactctattttctaccggcccaaagacaaagtggttcacgccgacaacgccagaatg
aacttcgtggtgccaggaggagaccacctggtgctgctcaacgtctacacacagtggttg
gagagcggttactccacgcagtggtgctacgagaacttcatccagttccgctccatgagg
agagcccgggacgtcagggaccagctggagggtctgatggaccgcattgaggtggaggtg
gtgagctcccagggagacagcttgcccatccgcaaggcggtgacagcgggatatttctac
cacacggcgcggctgagcaaaggcggctacaagacggtgaagcaccagcagacggtctac
gttcatcccaacagctgtctgttcgaggagcagccgcgctggctcatctaccacgagctc
gtcttcaccaccaaggagttcatgagacaggtgattgagatagacagcggctggctgctt
gaagtggctcctcactactacaagagcaaagagctggaggacagcagcagcaagaagatg
ccccgcaagcaggggaaagctaaagaggagctgggctaa
DBGET
integrated database retrieval system
