Cebidichthys violaceus (monkeyface prickleback): 137892581
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Entry
137892581 CDS
T10484
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Pathway
cve04382
Cornified envelope formation
cve04510
Focal adhesion
cve04512
ECM-receptor interaction
cve04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137892581
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
137892581
09142 Cell motility
04820 Cytoskeleton in muscle cells
137892581
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137892581
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cve04147
]
137892581
00536 Glycosaminoglycan binding proteins [BR:
cve00536
]
137892581
Exosome [BR:
cve04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137892581
Glycosaminoglycan binding proteins [BR:
cve00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137892581
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137892581
NCBI-ProteinID:
XP_068593945
LinkDB
All DBs
Position
Unknown
AA seq
1513 aa
AA seq
DB search
MGSSVTVVTLCPLRWILVLVIFVQQLNAGEIEGPCQGRNCSICQCLPAKGARGAPGKPGQ
QGPRGLMGPQTREGSPGEKGRRGAEGSHGPEGPKGDRGKTGVPGFPGNDGSPGHPGAGGD
PGFPGLDGCNGTRGRPGVFGIPGLDGLHGSPGLRGPKGIKGEPLYGATLPGLPGDRGRDG
ERGLPGRQGVIGTKGHSGPPGPLGLQGLEGPKGVRGRPGDPGGSLAGAKGDDGEQGPPGP
QGPEEVIEFPPDFLPPKGYKGDRGLPGPCGPKGISGGRGDTYIQQLKGEQGILGFPGVRG
LPGFPGRDGPPGPEGLHGEKGYPGLIGRNGPKGYPGDAGLPGALNFHNGSDARGVKGDRG
YPGTPGPHGDPGFMGMHGPPGSPGLTISEEPGLPGPRGFLGPKGYKGEPGSYNNFENLFP
GLKGTKGLLGPKGVTGPPGPPGCGDYYCEPGYPGDPGDIGPNGYPGKQGLKGLKGCPGEC
VCRSAGGTVGPPGPVGFPGPPGLPGTQGFKGDPGLKGYEGLRGPHGFQGIPGIQGQKGQK
GHSFVVDVNGAKGNQGVPGHSGSPGAEGRPGLDGPPGPAGDHGTPATQVLVLQALMGNLD
LKVIRDFLDPPVFLDDQALQVKLRNAVMKKRLDHLVQRESQAHRAGRVTQEMSSLPGQVI
LANPASLGLEAQADSVEFLETLGLQADKANLVDLVGKESQETMVTLEPLVPEAHPALRVH
LVMDTGVHKVSPALPVCQAQLDQEVPLVPQEILGPMAGQDRKAGLGPEVYQVVLDLRDPE
VNKEREALMVAQVTLDPQDSPVIKYRNILFVLTPTGLKGHRGVPGDSGPDGWPGSPGFKG
STGAPGRAGIPGPSGYPGINGFPGPRGYPGHDGDLGDQGPTGQSGIPGSPGYSGAKGERG
QSYGTPGPPGPKGLPGEDGPSAPRGSPGDPGYPGPQGRSGQPGQRCMVGEPGRQGGPGFP
GPHGPSGRPGVPGFPGDSGGLGPPGPPGPYGHTGLPGPPGLDGLDGLRGPKGIKGTSGTG
IPGPPGPDGFPGVKGLKGHQGPPGANFHGPKGQRGPPGATGLPGFPGQPGNPGKECYKLS
PGPNGDQGYEGPPGPPGPPGEPGPPGSIILNKGDPGPNGLPGLPGRKGDGGLPGPPGSQS
YPGFIGPKGERGPAGSRGPQAPKGHIGVPGPWGRKGVTGPAGDTGAKGAPGEYFHERTKM
APPGLPGPRGQPGSVGFPGDRGPPATPGRKGQKGPIGFVGLPGKPGPAGHNGPVGDPGDA
GQRGFAGPQGIPGPPGDPGNPGRREALRSGFLLVIHSQSVQVPLCPEGSSRLWVGYSLVY
LEGQEKAHTQDLGQAGSCLPVFSTMPFSYCNKGACHYSRRNDKSYWLSTTAPIPMMPLFG
LEISSHISRCAVCETASPAVAFHSQDHTVPACPPGWRSLWTGYSFLLHTGAGDEGGGQSL
DSSGSCLKDFRAHPFIECQGAHGSCHYFANLYSFWLTTVSQTEQFVTQRPDTIKAADKQR
RKASQCHVCLREQ
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgggatcctcagttactgttgtaactctgtgccctctcaggtggatccttgtcctggtc
atctttgtgcagcagctcaatgcaggggaaattgaaggtccatgtcaaggcagaaactgc
tctatatgtcagtgtcttcctgctaaaggtgcacggggagctccagggaagccaggccaa
caagggccccggggactaatgggaccacagacacgtgaagggtcacctggcgagaagggc
agaaggggagcagagggatcacatggcccagaggggcccaaaggagaccgcggcaagacc
ggtgttcctggttttcctggtaatgatggctcaccaggccaccctggagcaggcggcgac
cctggtttcccggggttggatggctgtaatgggacaagaggtcgaccaggagtctttggt
attcctggtttggatggtctccacgggtcgccgggattacgaggacctaaaggaattaaa
ggagaacctttgtatggtgctacccttccagggcttccgggggatcgtggtagagatgga
gagcgtggtctacctggaagacaaggagtcattgggacaaaaggccactctggccctcct
ggccctcttggacttcagggtttggaaggacctaaaggtgtgagaggacgaccaggcgac
cctggaggatcactggcaggagctaaaggtgacgatggtgagcaaggcccacctggccca
caaggaccagaagaagtcatagaatttcctccagacttccttcctcccaaaggctacaag
ggagaccgaggtcttcctggaccatgtggaccaaagggcataagcggtggtagaggagac
acatatatccaacaattaaaaggagagcaaggcatccttggttttcctggagttaggggt
cttccaggatttcctggtagagatggacctccaggccctgagggtttgcatggagagaaa
ggatatccaggtctcattggaagaaatggaccaaagggttacccaggagatgcaggtctc
cccggtgccctgaactttcacaatggaagtgatgccagaggtgttaaaggtgaccgaggg
tatcctggaacgcctggaccccatggtgaccctgggttcatgggcatgcatggacctcct
ggctcaccaggattaacaatatcagaagagccgggtctgcctggtccacgaggtttcctt
ggtccaaagggctacaagggagagccagggagttataacaactttgaaaatctgtttccg
ggactaaagggaactaaaggactcctcggacctaaaggtgtcacaggcccaccaggtcct
ccaggatgtggagattactactgtgagcctggttacccaggagaccctggtgacatagga
cccaatggatatcctggaaagcaagggctcaagggacttaaaggttgtccaggggaatgt
gtctgtaggtctgctgggggaacggtaggcccccctggtcctgttggttttccaggacct
ccagggttacctggaactcaaggatttaaaggagacccagggctgaaaggatacgagggt
ctaagaggaccacatggctttcaaggaattcctggtatacaaggacaaaagggtcaaaaa
ggtcactcctttgtggtagatgttaatggtgccaagggtaaccaaggagtgcccggacat
tctggttctcctggagcagaaggtaggccaggactggatggcccccctgggcctgcaggg
gaccatggaacgccggccacccaggtcctggtgctccaggccttaatgggcaacctggac
ctaaaggttatcagggacttcctggaccctccggtattcctggacgaccaggccctccag
gtgaagctgaggaatgctgtcatgaaaaagagattggatcacctggtccaaagggagagc
caggctcaccgggcaggaagggtgacccaggagatgtcctctctgccaggccaggtgata
ctggccaacccggcctccctggggctcgaggcgcaagcggactccgtggaattcctggaa
accttgggtctccaggcggacaaggccaacctggtcgacctggttggaaaggagagccag
gagacaatggtgaccctggagccactggtcccagaggcccaccctgcactgcgtgtccac
ctggtcatggacacaggggtccacaaggtttccccggccctcccggtttgccaggcccag
ctggaccaagaggtcccgctggtccctcaggagatcttgggaccgatggctggccaggac
agaaaggcagggctggggccagaggtttaccaggtcgtcctggacctgcgggacccagag
gtaaacaaggagagagaggctttaatggtcgcccaggtgacactggacccccaggacagc
ccggtaataaagtacaggaatatcttatttgttttgacacctacaggcttaaagggccat
aggggagtgccaggtgattcggggcctgatggatggcctggttcgccagggtttaaaggt
agcactggtgctccaggcagggcaggaataccaggaccttctgggtaccctgggatcaac
ggtttccctggtccaaggggatatcctggacatgatggagatctgggagatcaagggcca
acgggacagtccggtatcccagggtcaccaggatattcaggagccaagggtgagcgagga
cagtcttatggaacacctggtccacctggacccaaaggattgccaggggaggatggaccc
agtgcacccagagggagtccaggagatccagggtacccgggaccccagggaaggtctgga
cagcctggacagcgatgcatggttggtgaaccaggaagacaaggaggaccaggtttccct
ggacctcatggcccatcgggtcgtccaggtgttccaggttttccgggcgattctggaggt
ctgggacccccgggcccaccaggcccatatgggcatacaggcctccctggaccaccgggc
ctggatggactggatgggcttagaggtccaaaagggataaaaggaacaagtggcacaggt
atacctggccctcctggaccagatggttttcctggagtcaaaggtctcaagggtcatcaa
gggcctccaggagccaattttcatgggcccaagggccagaggggcccacctggtgccaca
ggtcttccaggctttccaggtcaacctggtaaccctggcaaagaatgctacaagctttcg
ccaggacccaacggagaccaaggatatgaaggacctccaggaccgccaggtcctcctggg
gagccaggccctccaggtagcatcattttaaacaaaggagacccaggcccaaatggcctc
ccagggttgccaggtcgtaaaggagatgggggcctcccagggcctcctgggtctcagagc
tacccaggctttataggaccaaaaggtgagagaggtcctgctggttctagaggtccccag
gcacccaaaggtcatatcggggtccctgggccttggggccgcaagggagtaacgggccca
gctggagacacaggtgcaaaaggtgctcctggtgagtatttccatgaaaggacaaagatg
gccccccctggactcccaggaccacgtggtcagccaggatctgtgggattccctggcgat
aggggtcctcctgcgactccaggacgtaaaggacagaagggccccatagggtttgtgggc
ctccctggcaaacctggtcctgctggacataatggtcctgttggagacccaggagatgct
ggtcagcgaggatttgctggacctcaaggtatcccaggtccacccggagatccaggtaac
ccaggccgaagggaggcattaaggtcaggcttcctgttggtgatccacagccagtcagtt
caggtgccgctgtgccctgaaggaagcagtcgactctgggtgggctacagtctggtgtac
ttggagggacaagagaaggctcacactcaagatctgggccaggctggctcctgcctccct
gttttctccaccatgccgttctcctactgcaacaaaggcgcctgtcactactcccgtcgc
aacgacaagtcctattggctctccaccactgctcccatacccatgatgcccctctttggc
ctggagattagctcccacatcagccgctgtgcggtgtgcgagacggcttcgcctgcagtg
gcttttcacagccaggatcacacagtccctgcatgcccgcctggctggaggagtctgtgg
acggggtactctttcctcctgcacacaggggcaggcgatgagggtggtggccagtctctg
gattcttctggaagctgccttaaggatttccgagctcaccccttcatagagtgccagggt
gcgcacggctcttgtcactactttgccaacctctacagtttttggctgaccaccgtcagt
cagacagagcagtttgtcacccagaggcccgacaccatcaaggcagccgacaaacagcga
cgcaaggccagtcagtgtcatgtctgcctcagagaacaataa
DBGET
integrated database retrieval system
