Cebidichthys violaceus (monkeyface prickleback): 137892773
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Entry
137892773 CDS
T10484
Symbol
rc3h1b
Name
(RefSeq) roquin-1 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
cve Cebidichthys violaceus (monkeyface prickleback)
Brite
KEGG Orthology (KO) [BR:
cve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cve03000
]
137892773 (rc3h1b)
04121 Ubiquitin system [BR:
cve04121
]
137892773 (rc3h1b)
Transcription factors [BR:
cve03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
137892773 (rc3h1b)
Ubiquitin system [BR:
cve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137892773 (rc3h1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
zf-CCCH
zf-C3HC4_2
zf-CCCH_4
Prok-RING_4
zf-CCCH_UNK
zf_CCCH_4
FYVE
NS3_helicase_C
Baculo_IE-1
RING_XB3-XBAT31
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
137892773
NCBI-ProteinID:
XP_068594245
LinkDB
All DBs
Position
Unknown
AA seq
1134 aa
AA seq
DB search
MPVQAPQWTEFLLCPICTQTFEETVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD
IEQLPVNTALLQLVGGQVPKAQPVALISSPEDSQHYEEARQCVEELALYLKPLSNTRGVG
LSSTAQSMLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLEKGLVAVKTVVHGLVDFIQNHSKKGADPQQPPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLAARLPGSGGLMPDEGLPLDVAVTRKPS
PLTNGSGGPSMPQLIARGTDAVPYELLRKPMKMDGGSPSAPGSPPDGMDPGLVKPGMVLP
PHAMAHQRMSVDHLSGVKHMPVVARGSPVYPQAPLPEMCYDSRPPPSASQYEPPQYPTGY
PYQQPPQYVPRDYMRNPPPPSESGPPYQDPYPSYGPPERPYQAPHSGPPFSYPHPPHHDR
GRHGTYTGPPPPPQPYPSQRDSLVRMSPAPLDMPPPSAGQANSLYHQEPSSRDRYPPDGY
YTPGAQPPLIRAYVRGPSYSGSQPSLDYLHRRRQELLSQLEERKVISPPPFAASPTLTHP
FPSDYPPEYGEENSKTMGKCREPDYAGQYSPWSCEMIGSYIGTKDAKPKDVMGPGTMDMM
NAEAKGLRDPSLEAPRRGAEVKDDDPIIPFGPQPTVSRFGAISRTSKTGYQTTGPVQAMA
STPQNPSSKHMAMPAEYTYGHGGWGGASYPSHQTASSSQGHFSERMPMATPDREQLKIEL
QQVNQQINQQTQMRSMEAASNSLLLQREASALAGQPGQPGQGQAAAAQQQPKWPAVGAST
AAVSSEQLSLELHQVEREIGKRTREMALENQVTHDVQQYKIKPAENGQPEHKTQLEEISL
ALGEVSNGSNSLQESAVGGSMLSLTNKTSALGLCSDPGATGSEMQKNGVVHSCS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgcaagcaccacaatggacagagttcctgctgtgcccgatctgcacacagaca
tttgaggagactgttcgccggcccatcagcttgggctgtggacacaccgtctgcaagatg
tgcctgaacaagttgcaccgtaaggcctgtccctttgaccagacagccatcagcacagac
atcgagcagctacctgtcaacactgccctgttacagctggtgggaggccaggttcctaag
gctcagccagttgccttgatttccagtccagaggactcgcagcattatgaggaggccagg
cagtgtgtggaggagctggccctctacctcaaacctctcagcaacaccagaggtgtgggc
ctgagcagcacggcccagagcatgctgagtcgacccatgcagaggaaactggtaaccctg
gtccactgccagctggtggaagaggagggccgtgttagagccatgagagccgcccgctct
ctgggtgagcgaaccgtcaccgaactcatcttgcagcaccagaatccacagcagctctcc
tccaacctgtgggccgccgtgcgtgcacgaggatgtcagtttctcggcccagccatgcag
gaggaagctctaaagttggtccttcttgctctggaggacggctctgcactgtccaggaag
gtgttggttctctttgtagttcagaggcttgagccacgcttcccgcaggcctctaagacg
agcattggccatgtggtgcagctcctctacagggcctcctgcttcaaggtgaccaaacgc
gatgaagattcatccctgatgcagctgaaagaggaattccgtacttacgaggctctgcgg
cgcgagcacgactctcagatagttcagatagccatggagggcgggctgcgcatcgcaccc
gaccagtggtcttctctgttatatggagatcaatctcacaagtcacacatgcagtctatc
atcgataagctgcagaccccggcatcttttgctcagagtgtccaggagctgacgattgca
ttgcagaggaccggagacccagccaacctgaacaggctgcggccacacctggaactactg
gccaacattgatcccagtcctgatgctcctcctcccacatgggagcagcttgagaaaggg
ttggtagcagtgaaaacagtggtgcatggtctggtggacttcatccagaaccacagcaag
aaaggagctgatcctcaacagcctcctcagcacagcaagtacaagacatacatgtgtcgt
gacatgaagcagaagggaggctgtcctcgtggagccagctgcaccttcgctcattctcag
gaagaactggagaagtatcgtaaaatgaataagcgtttggcagctcgcctccctggctca
ggagggctcatgccagatgagggtcttcctctcgacgtagcagtgacccggaagccttca
cctctcaccaacggtagcggtggaccttccatgcctcagctaattgcccgcggcactgac
gcagtcccgtacgaactgttgcgtaaacccatgaagatggatggagggagtcccagcgct
ccaggatcaccacctgatggcatggaccctgggctggtcaaacctggtatggttctgcca
cctcatgccatggcccaccaaaggatgtcagtggaccacctctctggggtgaagcacatg
cctgtggtagccagaggttcaccagtctacccccaggcaccgctccctgagatgtgctat
gacagtcgcccaccaccttctgcttctcagtatgagccccctcagtaccctacagggtac
ccttaccaacagccgccgcagtatgtccctcgggattacatgcgtaaccctcctcccccc
agtgagtcaggacccccttaccaggacccctatcctagctacggccctccagagcgcccc
taccaggcccctcattctggtccacctttctcttaccctcaccctccgcaccatgaccga
ggtcgccacgggacctacactggcccgccacctcccccacagccttacccatcacagagg
gacagcctggtcagaatgagtcccgctcctctggatatgcccccgccatcagcaggacag
gctaactccctttaccaccaggagcccagttcccgtgatagataccctccagatggctac
tatacaccgggggcccagcctccactcataagggcttatgtcagggggccatcatatagt
ggttcacagcccagccttgactacctgcaccgacgccggcaggagctgttatcacagctg
gaggaaaggaaggtcatatcccctccaccattcgctgcctcacccactcttactcacccc
tttcccagcgactaccctccagagtatggcgaggagaactccaaaaccatggggaaatgc
agagagccggattatgcagggcagtactctccctggtcttgtgaaatgattggctcctac
attggtacgaaggatgccaaacccaaagatgttatgggtcctggtaccatggacatgatg
aatgcggaggctaagggtctgagggatccatcactggaggctcctcggaggggtgcagaa
gtgaaagacgatgaccccatcatcccatttggcccccagcccaccgtatcacgcttcggt
gccatctcccgcacctcaaagacgggctaccagaccacaggccctgtgcaggcgatggcc
tccactcctcagaacccaagctctaaacacatggccatgccagcagaatacacatatggc
catggaggatggggtggagcttcatacccctcacaccagactgcctcctcctctcaggga
cacttcagtgagcgtatgcctatggcaactccagacagagaacagttaaagattgagctg
cagcaggtcaaccagcagatcaaccaacagacccagatgcgaagcatggaggctgccagt
aactctttactgctgcagagggaggccagtgcattggcaggccagcccgggcagcccggc
cagggccaggcagcagcagctcaacagcagcccaagtggccggcagtgggagcaagtaca
gcagctgtctccagtgagcagctgagcctggagctccaccaggtggagagagagattggc
aagaggacccgtgagatggctttggaaaaccaagtgacccatgacgttcagcagtataag
attaaacctgcagagaatggacaaccagagcataagactcagctagaagaaatctccctg
gctcttggcgaggtgtccaacggctccaacagtctgcaagaaagtgcagtgggcgggtcc
atgctgtcactgaccaataagacgtctgctttgggcttgtgctctgacccaggtgccact
ggttcagaaatgcagaagaatggcgtcgtccattcctgctcatag
DBGET
integrated database retrieval system
