KEGG   Charadrius vociferus (killdeer): 104281514
Entry
104281514         CDS       T08577                                 
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
  KO
K20179  vacuolar protein sorting-associated protein 11
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf04140  Autophagy - animal
cvf04142  Lysosome biogenesis
cvf04148  Efferocytosis
cvf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    104281514 (VPS11)
   04140 Autophagy - animal
    104281514 (VPS11)
   04148 Efferocytosis
    104281514 (VPS11)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104281514 (VPS11)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cvf04131]
    104281514 (VPS11)
Membrane trafficking [BR:cvf04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    104281514 (VPS11)
   Hops complex
    104281514 (VPS11)
SSDB
Motif
Pfam: PEP5_VPS11_N TPR_PEP5_VPS11 VPS11_N VPS11_C VPS18_solenoid_2nd Clathrin zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-rbx1 TPR_GEMI5 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_1st zf-C3H2C3 zf-RING_5 zf-RING_UBOX Beta-prop_IFT122_1st Paralemmin zf-ANAPC11 zf-RING_11 CC_Bre1 zf_RING_Vps8_fungal Beta-prop_VPS8 zf-C3HC4_3 zf-RING-like DivIC IPGA1_CC
Other DBs
NCBI-GeneID: 104281514
NCBI-ProteinID: XP_009877826
LinkDB
Position
Unknown
AA seq 873 aa
MEGQIWFLPRSLQLSSFQAYKLRVTHLYQLKQHSILVSVGEDEEGINPLVKVWNLEKRDG
GNPLCTRIFSAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILH
EGSYPVTGLAFRQSGKTTHLFVVTTENTQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQ
DLQFIVAGNECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEA
QNSDKQVLNIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEM
LFRKNLFEMAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYV
IRKFLDAQRIHNLTAYLQTLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVRF
DVETAIKVLRQAGYYSHAVYLAEKHAHHEWYLKIQLEDIKNYQEALRYIGKLPFDQAESN
MKRYGKILMHHVPNETTELLKILCTDYQPSGDNEGPGMPEGKKANSEEFIPVFANNSREL
KAFLEHMTEVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFD
KALVLCQMHNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQAL
GYFARKEEDCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSR
QIEQDEQRIQKYREETTRIRQEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQ
HCFESYSESDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGR
GVFNKLTLITDLPSGKAAATIEAGLQRELSLYV
NT seq 2622 nt   +upstreamnt  +downstreamnt
atggaaggacagatctggtttttgcctcgatcccttcagctcagcagtttccaagcttac
aagctaagggtgacgcacttgtaccagctgaagcagcacagtatcctcgtttctgttggg
gaggacgaggagggtattaaccccttggttaaagtctggaacctggagaaacgcgatggt
ggcaatcctctttgcacacgaattttttccgccataccaggtaacaagcccacagttgta
tcctgcctcactgtccacgagaatcttaatttcatggctatcggttttgcggatgggagc
gttgtacttacaaaaggagatatcactcgagaccggcacagtaagacccagatcctacat
gaaggcagttatccggttactggccttgctttccgacaatctggcaagactacacatctg
ttcgtggtgactacagagaacactcagtcttatatgctttcagtgaaagactatcctcac
ctggagctagacacccacggctgtggattgcgctgttcatctctcagtgacccctcccag
gatctccagttcatcgtggcagggaacgaatgtgtgtacctttatcagccagatgaacgt
ggcccctgctttgccttcgagggacaaaagctgattgttcactggtatcgggggtacctc
atcattgtctccaaggaccgaaagacgtctccaaagtcagagtttgctgggaacgaggca
cagaattcagacaaacaagtcctgaatatctatgacttgtgcaacaaattcattgcgtac
agctcaatcttcgatgacatagtggatgtcttggcagagtggggttctctgtatgtactg
accagagatgggaagattcacgttctgcaggagaaggatacccaaaccaaactcgagatg
ctgttcagaaagaacttatttgaaatggccattaacctggccaagagccaccacttggac
agcgatggcttgtcagagattttccggcagtatggcgatcatctgtataacaaagggaac
catgatggagccatccagcagtatatccgaactatagggaagttggaaccgtcttacgtt
attcggaaattcctggatgctcagcgtatccacaatctcacagcttatctgcagacgctc
cacttgcagtccctggccaatgcggaccatactacgcttctgctgaattgctataccaaa
ctcaaagacagctccaaactggaggagttcattaagacgagtgagagcgaggtccgcttt
gatgtggaaacagcgatcaaggtgcttcgtcaagcgggttactactcccatgctgtctac
ctggcagagaagcacgcgcatcatgaatggtacctcaaaatccagctagaggacatcaag
aactaccaagaggctttgcggtacattggaaaactgccttttgatcaggcagagagtaac
atgaagcggtatggtaaaatcctgatgcaccatgtccctaacgagaccacagaattgctg
aagatcctttgcaccgattaccagccatcgggagacaatgaaggccctgggatgccggaa
ggaaaaaaggctaattcagaggagttcattcccgtctttgcaaacaactcccgagaactg
aaggcttttctggagcacatgactgaggtgcaggctgactcaccgcagggtgtctatgac
actttattggaacttcggctccagaactgggcacatgaacaggatgagcagatcaaggag
aagctgcacaatgaagccctcaccctcctgaagagcggaaggttcaagacagtctttgat
aaggccttggtcttatgtcagatgcacaatttcaaggatggtgtcctctacctctatgag
cagggcaaactcttccaacagatcatgcactaccacatgcagaatgagcagtacaagaag
gtgatcgaggtgtgcgagttgtatggtgaccaagaggcttgtctctgggaacaggctctt
ggctactttgcacggaaggaggaggactgcaaagagtatattgctgcggtgctgaaacat
atcgagaacaagaatcttatgcctccactgcttgttgtgcagacgctggctcataactcc
acagccacactgtctgtgattaaggattatcttgtcaacaagctgcagaagcagagccgc
cagatagagcaggatgagcagagaattcaaaaataccgagaagaaactacaaggatccgc
caggagatcgaagaactgaaagcaagtcccaagatctttcagaaaacgaagtgtagcatt
tgcaccagtgccctggaactgccttcagtccactttctgtgtggtcactccttccaccag
cattgctttgagagctactccgagagcgattccgagtgtcctacttgcatgccagaaaat
cgcaaagtgatggacatgatccgagcccaggagcagaagagagatctgcacgaccagttt
cagcatcagctcaagtgttccaacgacggcttctccgttgttgccgactacttcggtcga
ggtgtcttcaataagctcaccctcatcacggacctgccctcgggaaaggcggccgcgacc
atcgaggcaggcctgcagcgggagctgagtttgtacgtgtga

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