Charadrius vociferus (killdeer): 104281543
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Entry
104281543 CDS
T08577
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104281543 (HDAC9)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104281543 (HDAC9)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
104281543 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
104281543
NCBI-ProteinID:
XP_009877862
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MLQTIYESESCFSSDGVSGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MVPMVDPIMREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE
LLAIKQQQELLEKEQKLEQQRQEQELERHRREQQLPPLRGKERGRERAVASTEVKQKLQE
FLLSKSATKDSPANGKNHSMSRHPKLWYTAAHHTSLDQSSPPLSGASPPYKYTLPGAQDA
KDDFPLRKTASEPNLKVRSRLKQKVTERRSSPLLRRKDGNVVSSFKKRLFEVTESSVSSS
SPGSGPSSPSNGPTSSITENETSVLPSNIQAEQLVSQQRLLIQDESVNLLSLYTSPSLPN
ITLGLPAVQPQMSASSSFKEKQKGDTQSLRQGVALAGQYGGNIPPSSTHPHVALEGKPNS
SHQALLQHLLLKEQMRQQKLLVTGAVPLHPQSPLAAKERVSPGIRAAHKLPRHRPLNRTQ
SAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQLKQPGSHLEEAEEELH
GDHSMQEERAPAGGASVRAESSSAGVDDRIGQQVGAVKVKEEPPDSDEDVQTQQMESGEQ
AAFMQQEFLAHRRVHQLQIYQAQMATVGVAGLDKHRPVSRTSSSPADSTLPHPAMDQPSQ
HVYTTGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLE
EIQLVHSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSA
GAARMAVGCVIELAGRGASPELKGRNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLR
DKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGE
GYNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGY
KVTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVH
QIPNMNAIASLKKTTEIQSKYWKSVEPYSVPVDCALAESQKREREETETVSAMASLSVDV
EQCVPQEGSRAAGEPMEEEPAL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacaatttacgagagtgaatcgtgtttttcctcagatggggtttctggacgt
gaacagctcttggctcagcaaagaatgcacagtatgatcagctcagtggatgtaaagtca
gaggttcccgtgggattagagcctatctcaccattagacttgcgaaccgatctcaggatg
atggttcccatggtggacccaattatgcgtgaaaagcagctacagcaggaactacttctc
atccagcagcagcagcaaattcagaaacaactgctgattgcagagtttcagaagcagcat
gaaaacctgacccgccagcatcaggcccagctccaggagcacataaagttacaacaggaa
ctcctagccattaaacaacagcaagaactccttgaaaaagaacagaaactggagcagcag
agacaagagcaggaactggagaggcatcgcagggaacaacagcttcctcccctccgaggc
aaagaaagaggccgagaaagggcagtggctagtaccgaagtgaagcagaaacttcaagag
ttcctgttgagtaaatcagcaacaaaagactctccagcaaatgggaagaatcattccatg
agccgccaccccaagctctggtacacggctgcccaccatacctcactggatcaaagctct
ccacccctgagcggggcctcgccaccatacaaatacactttaccaggagcgcaggatgcc
aaggatgattttccacttcgtaaaacggcttcagagcccaatttgaaggtacgttcacgg
ttaaaacaaaaggtgacagaaaggagaagcagtcctctactcaggaggaaggatggaaac
gttgtcagttcattcaagaagcgactttttgaggtgacagaatcctcagtcagtagcagc
tcccctggatcaggtcccagttctccaagcaatggtccgaccagcagtataacagaaaat
gaaacctcagtattgccatctaacattcaagctgagcaactggtttcgcagcaacgcctg
ttgatacaggatgaatcagtgaacttgttgagtctgtacacatccccttctctacccaac
attaccttgggacttccagcagtacaacctcaaatgagtgcttcatcgtcattcaaagaa
aagcagaagggggacacccagtcgctcagacaaggagtggccttggctggacagtacggg
gggaacattcctccatcctcaactcatccacacgttgctttggagggaaagccaaatagc
agccaccaagctctcttgcagcatctgttactgaaagaacaaatgagacagcaaaaactt
ctcgtgactggagcagttcctcttcatccacagtctcctttagcagcaaaggagagagtc
tcacctggcataagagctgcccacaaactgcctcgtcacaggccactgaatcgaacccag
tcagctcctcttcctcagagcactttggcccagctggtcatccagcagcagcatcaacaa
tttttggagaagcagaaacagtaccagcagcagatccacatgaataagatgctctctaag
tccattgagcagctcaagcagcctggcagtcacctggaggaagctgaagaagagcttcat
ggagatcactcgatgcaggaggagcgagctcccgccggcggtgccagcgttagggctgag
agcagcagtgctggtgtggatgacagaataggacagcaggtgggggctgtgaaagtcaaa
gaggagccaccggacagtgatgaggatgttcaaacccagcaaatggaatctggggagcaa
gctgcttttatgcaacaggagttcctggcgcatcggcgtgtccaccagttgcaaatctac
caggctcagatggctacagttggcgtggcgggattagataaacatcggccggtgtccagg
acctcgtcttcccccgctgattccacattacctcacccagccatggaccagcccagccag
catgtctacacgactggtgttgtgtatgacagtctgatgctgaagcaccagtgtatgtgt
ggcaactatgctaatcaccctgaacacgctggaaggatccaaagcatctggtcaaggctg
caagaaactgggttgctgaacaagtgcgagcgaattcgaggtcgaaaagccagtctggag
gaaatacagctggttcactctgaacatcattcactgctgtatggcaccagccccctgaac
agacagaagctggaccccaggaaactcctaggaaacgtgtctcaaaaactcttttccttg
ttgccttgtgggggactcggggtggacagtgacaccgtttggaacgagctgcactcggcc
ggggcggcacgcatggcggtgggctgtgtcatcgagctggcgggccgcggggcctccccg
gagctgaaggggaggaatggctttgctgttgtaaggcccccaggccatcatgctgaagaa
tcaacagccatggggttctgcttttttaattcgattgcaattactgccaaatacttgaga
gacaagctaaatataggcaagatattgattgtagatctggatgttcaccatggcaacggt
acacagcaggctttttatgctgaccccagcatcctgtatgtttccctccatcgctatgat
gaaggcaacttcttccccggcagtggagccccaaatgaggttggaagtggccctggtgaa
gggtataacataaatattgcttggacaggtggcttggatcctcctatgggtgatgttgag
tatctcacagcattcaggactgtgattatgccagccgccaatgagttcgatccagagatt
gtcctggtgtcagcgggatttgatgccgtggaaggccacgaccctccactgggcgggtac
aaagtcactgctaaatgttttggtcacctaaccaagcaattgctgaagctagcggatggc
cgtgttgtgctggcactggagggaggacatgaccttactgccatctgtgatgcatctgaa
gcctgtataaacgcccttttaggaaatgagctggagcctctcccagaagatattgtgcac
caaatccccaatatgaatgcaatagcttctttaaaaaagaccactgaaattcaaagcaag
tactggaagtcagtggagccatactcggtgccagtggattgtgctctggccgagtctcag
aaacgagagagggaggagacagaaacggtatctgctatggcctctctttcagtggacgtc
gagcagtgtgtccctcaagaaggcagcagggctgctggcgagcccatggaagaagagcca
gccttgtga
DBGET
integrated database retrieval system
