Charadrius vociferus (killdeer): 104281567
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Entry
104281567 CDS
T08577
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04621
NOD-like receptor signaling pathway
cvf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104281567 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104281567 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cvf04054
]
104281567 (NOD1)
Pattern recognition receptors [BR:
cvf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104281567 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
CARD
NOD2_WH
LRR_4
AAA_22
AAA_16
FumaraseC_C
Motif
Other DBs
NCBI-GeneID:
104281567
NCBI-ProteinID:
XP_009877889
LinkDB
All DBs
Position
Unknown
AA seq
951 aa
AA seq
DB search
MEGQLCANLEISVGKHRGASPSSFIALLKVYRELLVSRIRNTQCLIDNLIKNDYFSTEDA
EIVVQFPTQADKVRKILDLVQSKGEEVSEYFIRVLQKVTDAYYELQPWLDEVGYEPSENI
CNKPVVNTDPVSRYCQKLRHELGRDSKFVTSYAQREEMLLEEIYSNSIMELVSFTNESLG
EVCQLEALFDDAVGLINEDGETIYVFGDAGIGKSILLQKIQSLWARRELDIGAKFFFRFR
CRMFSCFKEDEAICLKDLLFKYNCYPDQDPTEVFHHILQFPHTVLFTFDGFDEIYSNFDL
SSVPEMCSPNEPIHPLVLLVSLLRGKLLKGSKKILTARTGTEIQRNIIRKKVLLRGFSSN
NLKEYTAMFFKDEGQRTLVLNQLEANPNLCSLCSVPLFCWIIFKSYEHFHSMFDNHELPD
CSVTLTDVFLLMIEVHLNRSLKISLLKNNTRSQAEMFRSRKETLLALGKMAYKGMKNSFF
IFEQEEVSSANISEEDLQLGFLRTVKGYSGCDNQSTYEFLHLTLQSFFTALFLVIEEKVG
AKELLQFFNECSSTETVQPTCLRIPWLKKQLAGEDPFRNNEHFNFTNLFLCGLLSRSKQK
LFRHLVLPAVIKRKRKTLITYLGESMKSHLKGLTRSRLSGYNQIQGQPNFVWMLRCLYET
QSEKVGKLAAKRMHANYIKLTYCNAYSADCSAISFIVHHFQKRLALDLDNNNINDYGVKQ
LLPCFSKLAVIRLSVNQVTDHGVRILYEELSKYQIVTFLGLYNNQITDVGAKYVAKLIEE
CSSLEYVKIGANKITSEGGKCLAQAIQKSKTMFEIGMWGNQVGDEGAKAFAEALRNHPRL
TNVSLAFNGITTEGGKSIAEAMQHNNSVKIFWLTKNELDDEAAMSFADMLKVNKKLVHLW
LIQNQITAKGVKYLSEALKENTAIKEVCLNGNLISQEEAKAFENEERIICF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaactttgtgctaacttggagatttctgtgggaaaacatcgaggagcaagt
ccttcgtccttcattgctttgctgaaggtataccgagaacttctggtcagtagaatccga
aacacgcagtgtttgattgacaacttgattaagaatgactacttctccactgaagatgca
gagattgttgtccaatttccaactcaagcagataaggttcgcaaaattctagacttggtt
cagagcaagggagaagaagtctcagaatatttcatccgtgtcctgcagaaagtcaccgat
gcttactatgaacttcagccttggctggatgaagtaggttacgagccttcagagaatatt
tgtaataaacctgtggtaaatacagatccagttagcaggtattgccagaaactcagacat
gaactgggacgggactccaagtttgttacttcatacgctcagagggaagagatgctgctt
gaagaaatctactctaacagtattatggagctcgtcagttttaccaatgagagtctaggc
gaagtgtgtcaattagaagccctttttgatgatgcagttgggctaattaatgaagatgga
gagactatttatgtcttcggtgatgcaggaattggaaaatccatcttgctgcaaaagata
caaagtctttgggccagaagagaattggacataggggccaaatttttcttccgtttccga
tgtaggatgtttagttgctttaaggaagatgaagccatatgtttgaaagacctactcttc
aaatataattgctacccagaccaggaccccacagaggtgttccatcacattttgcaattc
cctcatacagttcttttcacatttgatggcttcgatgagatctattccaactttgatctc
agtagtgttcctgagatgtgttcacccaatgaacccatccaccccctggtgctgctggta
agtcttctcagaggaaagcttcttaagggatccaagaaaattcttacagcgaggacagga
actgagatccaaagaaacatcattagaaagaaagtgttgctccgtggtttctccagcaat
aacctgaaggaatacactgccatgtttttcaaagatgaggggcaacgaacactggtattg
aaccagttggaagccaaccccaatctctgcagtttgtgttcagtgcctttattttgttgg
attatctttaaatcctatgaacacttccattccatgtttgacaaccacgagcttccagat
tgttctgttacattgacagatgtatttttgctcatgattgaagtccatctgaaccgatct
ctgaaaataagtttgctgaagaacaacaccaggagccaagcagagatgttcagatcaaga
aaggaaactcttctagctttgggtaaaatggcatacaaagggatgaagaactctttcttt
atttttgagcaggaggaagtctcatcagcgaacatctcggaagaagatttgcaattgggc
tttctcaggacagttaaaggttacagtggctgtgacaatcagtccacttacgagttcttg
cacttaacccttcagtcttttttcacagctttgttcctggttattgaagagaaagtgggc
gccaaggagttacttcagtttttcaatgaatgttcttccactgagactgtccagcctact
tgccttcgtattccttggttgaagaaacagctagcaggggaggatcctttccgaaataat
gaacactttaattttaccaacctgtttctttgtggcctgctttctagatccaagcagaag
ctcttcagacatttagttttgcctgctgtcattaaaagaaagagaaagacactcatcacg
taccttggggagagcatgaaatcacacctgaaaggcctcactcggtccagactttcaggc
tacaatcagatccagggccagcccaactttgtttggatgctgaggtgcctttatgagacc
cagagcgagaaagtggggaagttagctgccaaacgcatgcacgccaattacatcaagctc
acatactgcaatgcctactctgctgactgcagtgctatttcctttattgtgcatcacttt
caaaagcgtctggctctggatttggacaacaacaacatcaatgactatggagtaaaacag
ctgcttccttgtttcagcaagcttgcagtgatcaggctcagtgtaaatcaggtcacagat
catggagtaaggatcttgtatgaagaactctccaagtaccaaattgtgactttcctgggc
ttatacaacaatcaaatcactgatgttggagccaaatacgttgcaaaacttattgaagag
tgttcgagccttgaatatgttaaaataggagcaaacaaaataacgagtgaaggagggaag
tgccttgcccaggccatccagaagagcaagacaatgtttgaaattgggatgtggggtaat
caagttggagacgaaggagcaaaggcatttgcagaggccctgaggaaccaccccaggtta
acaaatgtgagtctcgcattcaacggcatcacaacagagggaggcaaaagtattgctgaa
gctatgcaacacaacaactctgtgaaaatattctggttgactaaaaatgagctggatgat
gaggcagcaatgagttttgcagacatgctgaaggtcaacaagaaactggtgcatttatgg
cttatccagaatcaaattacagccaaaggggtcaagtacctcagtgaagcgctcaaggag
aacacagctattaaagaagtctgtttgaacgggaacctgataagccaagaagaggccaaa
gcttttgaaaacgaagaacggatcatttgcttttga
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