Charadrius vociferus (killdeer): 104281680
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Entry
104281680 CDS
T08577
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04110
Cell cycle
cvf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104281680 (SMC1B)
04114 Oocyte meiosis
104281680 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104281680 (SMC1B)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104281680 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
104281680 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
rve
Motif
Other DBs
NCBI-GeneID:
104281680
NCBI-ProteinID:
XP_009878020
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All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MGYLKLLALKDFKSWRGEQVIGPFMRFNCIIGPNGSGKSNIMDAVSFVLCEKTANLRVKS
VRELIHGAHVGKPVSSTASVKIVYCEEDGEEKSFSRVIRGSCTEFLFNDKSVSRSTYISE
LEKVGILVKAKNCLIFQGTVESIAMKKPKERTQLFEQISNSWEYAEDYERKKEKMQEAEE
DVQFNYNKKKSVAAERKQAKIETEEAEHYWMLLKELDEERVQLKLFRLYHNEKSIDFLKK
SLDEKNMETNTKKESLSTAEDAFRVKKKALGVLNRDQQQMDREVKALEASLIQQRSLYVK
AKEITSYQIKKVEASKKSLRDKEKSCDKEKQNIKELEIELNDIEKAWKAFEKKTEEELLQ
RAARIELRENQLERYEELKEIARKKVATLTQQLEKLRWEEKADQERLKLNRRKKKEVEEN
IKQTMEQIEEHEKRIEKLEEYAKICTESLAEKKQQEEVLTKEIENSTIRIAEVNEELNKI
VGELQNAKIDYHEGRRQQMRAEILESLKRLYPDSVFGRLLDLCHPTHKKYQLAVTKVFSK
YMTAIVVATEKTAKDCIRFLKQERAEPETFLALDYLDVRPINEKLREIKGAKMVVDVVQT
PFPPLKKVIQFVSGNSLVCETVKEAKQIAFDGPVRLKTVALDGTLFLKSGVISGGSSDLR
LKARCWDDKEMNKIKARRESLNNELKDLMKIKRKETDLKQLHAQCHGIQTRLKYSQSELD
LIKKKHLFNLYMEKSKLESELVNIESQHNMLNEGVAKRKEKIEEFQKKINEAEDAVFREF
CEEIGIENIRVYEQEHVRQKEEIDKRRLEFENQKTRLNIQLEYNRDHLQKLTNAVSELRE
TIHKDEPEIIGLQKDEEKLLKKVNEIVEEQQHLKDRLSAHKSEVIKAQNEVEEFRKTLLS
RNRETTKLQKEATAIETALEEKRLRRHNMLLECKVQDLKIKLLSGSLDDISEVELGTETE
DTQTTSSIYEREEAIQIDYSSLAEDLKDLESDKDIQGHLNQMQQEIKSKENTLMKTAAPN
LRAVEKLQIARDKFQESIDAFETSRKEARTCKEEFEQVKKKRYELFSRCFEHASVAIDQI
YKKLCRDSSAQAFLTPENPEEPYLEGIGFNCIAPGKRFMPMDCLSGGEKSVAALALVFAV
HSFRPAPFLILDEIDASLDNTNIDKVSSFIREQAHEQLQMIVISLKEEFYCKADALIGVC
PEHDDFMFSRVLTLDLTEYPDVDDQEGTEHKGRIKHG
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctgaagctgctggcgttgaaggacttcaagtcatggcggggggagcaggtg
attggccccttcatgaggttcaactgcatcatcgggcccaacggctcaggaaaatctaac
ataatggatgctgtcagttttgtgctgtgtgagaagacagctaatttgcgagttaaaagt
gttagagaacttattcatggagcacatgttggaaaaccagtttcttctacagctagtgtg
aagatagtatattgtgaagaagatggggaagaaaaatcgttttcaagagttatccgtggt
agttgtactgaattccttttcaatgataaatctgtcagccgatctacttacatatctgag
cttgaaaaagtaggcatacttgtcaaagctaagaattgtcttatttttcagggtacagta
gaatcaattgcaatgaagaagccaaaggagagaacccaactttttgaacaaatcagtaat
tcatgggaatatgctgaagactatgaacgaaaaaaggaaaaaatgcaggaagcagaagag
gatgtacagtttaattataacaagaaaaaaagtgttgcagcagaacgcaaacaagcaaag
atagagacagaggaggcagagcattactggatgcttctcaaggaactggatgaagaaagg
gtacagctgaagcttttccggctttatcacaatgaaaaaagcattgactttttgaaaaaa
agtttggatgagaagaatatggagactaataccaagaaagagtctctttctacagcagaa
gatgcatttagagtcaagaaaaaagcgcttggtgtactaaacagggaccaacagcagatg
gatagagaagtgaaggctctggaagcatcactgattcagcagagatccctctatgtaaaa
gcaaaggaaatcacttcctaccaaatcaagaaagtagaagcatctaaaaaatctctaagg
gacaaggagaaatcctgtgataaggaaaagcagaacataaaagaactagagatagaattg
aatgatattgagaaggcgtggaaagcatttgagaagaaaactgaagaggagttactgcag
agagcagcacgtattgaactgagagaaaatcagttggagcgttatgaagaactaaaggaa
atagcaagaaagaaagtagctacgctcacccagcagctagagaaacttcgttgggaggaa
aaagcggatcaagaaaggctgaaacttaatcggagaaagaaaaaagaagttgaggaaaac
ataaaacaaaccatggaacagatagaagagcatgaaaaacgaatagagaagttggaagaa
tatgccaagatatgcactgagtcgttagcagagaaaaaacagcaagaggaagtgctaact
aaggaaattgaaaattcaacaatacgaatagctgaagtgaatgaagaattgaacaaaata
gttggtgaactgcagaatgccaaaattgattaccatgaaggaaggcgtcagcaaatgaga
gcagagatcctggaaagtctcaaaagactatatccagattctgtgtttggaagactgctt
gacctgtgtcatcctactcataaaaaataccagcttgctgttaccaaggtattcagcaaa
tacatgactgctattgttgttgccactgaaaaaacagcaaaagattgcattcggttccta
aaacaagaacgagctgaacctgaaacttttcttgctttggattaccttgacgttagacca
atcaacgaaaagttaagagagataaaaggagctaaaatggtggtggatgttgtacaaact
ccgtttcctccactgaaaaaagtgattcagtttgtgagtgggaatagcttggtctgtgaa
acagttaaagaagcaaaacaaatagcatttgatggaccagtgaggttgaaaacagtggct
cttgatggaactttatttttgaaatctggagtgatttctggaggatcaagtgatttaaga
cttaaagctagatgttgggatgataaagaaatgaataaaataaaagcaagaagagagagc
ttgaataatgagttaaaggacttaatgaagatcaaacgtaaggagactgacttgaaacag
ttgcatgctcagtgccatgggattcagacacgacttaaatattcacagagtgaattagat
cttattaaaaagaaacatctctttaatctctacatggaaaaatcaaaactggaaagtgaa
ctggtaaatattgagtctcagcataatatgctgaatgaaggagtagcaaaaagaaaagaa
aaaatagaagaatttcagaaaaaaattaatgaggctgaggatgctgttttccgggagttc
tgtgaagaaattggtatagaaaatattcgtgtgtatgaacaagaacacgtgagacaaaaa
gaggagattgataagagaagactggagtttgaaaatcagaagacacgactaaacattcag
ctagaatataatcgtgatcatctacaaaaattaacaaatgcagtcagcgagttgagggag
accattcataaagatgaacctgagattatcgggctacagaaggatgaggagaagcttcta
aaaaaagtgaatgaaattgtggaggaacagcaacatcttaaggatagattaagtgctcat
aaatctgaggttataaaagcccaaaatgaagttgaagagttcagaaagacattgttaagt
cgtaatagggaaactacaaaattacaaaaggaagctacagctatagaaaccgctctggaa
gagaagagattaagacgacataatatgcttcttgaatgcaaggtgcaggacttgaaaata
aagctcctgtctggatcactggatgatatcagtgaagtagagctaggaactgaaacagaa
gacactcagactacatcaagtatctatgaaagggaagaggcaattcagatcgactacagc
agcctagcagaagacctgaaggacctagagtctgataaagatatacaaggtcatctcaac
cagatgcagcaggaaataaaatctaaagagaacactttaatgaagacagctgctccaaac
ctgagagcagtagagaaattacagatagctcgggacaagttccaagaatcaatagatgct
tttgaaaccagcagaaaggaggccagaacatgcaaggaagaatttgaacaagtgaaaaaa
aagagatacgagctttttagccgatgctttgagcatgcctctgtagctattgatcagatc
tacaagaaactttgcagagacagtagtgctcaggcattccttactcctgaaaatcccgag
gagccttatctggaaggcattggctttaactgcatagctccgggaaaacgctttatgcca
atggactgtttgtcaggaggtgaaaaatctgtggcagctctggctctcgtgtttgctgta
cacagttttcggccagcaccttttttaattttagatgagatagatgcttccctggataac
acaaacattgataaagtatcaagtttcattagagaacaggcacatgaacagttacaaatg
atagttatttctctaaaggaagagttttattgcaaagcagatgcattgattggagtgtgt
ccagagcatgacgactttatgttcagtcgtgtactgactttggatcttaccgagtatcca
gacgttgatgaccaggaaggaacagagcacaaaggcagaataaagcatggatga
DBGET
integrated database retrieval system
