Charadrius vociferus (killdeer): 104281797
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Entry
104281797 CDS
T08577
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104281797
03036 Chromosome and associated proteins [BR:
cvf03036
]
104281797
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104281797
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104281797
SLIK complex
104281797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
DEAD
Motif
Other DBs
NCBI-GeneID:
104281797
NCBI-ProteinID:
XP_009878147
LinkDB
All DBs
Position
Unknown
AA seq
1799 aa
AA seq
DB search
MNGHSDEDIVRNSSGESSQSDDDSGSAPASGSGSSSGSSSDGSSSQSGSSDSESGSESGS
QSESESDTSREKKQVQAKPPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQNAASSDSGSE
EDSSSSEDSADDSSSKTKKKKHRDEDWQMSGSGSVSGTGSDSESEEDREKSSCEDSESDY
EPKNKVKSQKPPSRIEPKSSKKIAGQKKRQLDSSDDDDYDKRGSRRQATVNISYKEAEET
KTDSDDLLEVCGEDVPQTEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADGDPNTGFE
MSKELGEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWLKNASP
EDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSWEDGAL
IAKKFQACIDEYFSRNQSKTTPFKDCKILKQRPRFVALKKQPSYIGGHESLELRDYQLNG
LNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQRE
IQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFLGGLNW
VFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFSSW
EDFEEEHGKGREFGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQKQYYKW
ILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSG
KLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALD
HFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVN
IYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAI
LKFGAEELFKEPEGEEEEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMD
EDDIELEPEQNLRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGK
RGRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERL
DAIARDAELVDKSEMDLRRLGELVHNGCIKALKDNSFGQERAGGRLGKVKGPTFRISGVQ
VNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEY
GYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLTGA
GNSKRRKTRTKKNRAMKAAKIKEEIKSDSSSPPSEKSDEDDEDNEDEIVSVKHTHKKIKA
EENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKNIKEKRENKVKESA
QKEKEVKEEKVNEIKSENKEKNKKVSLLDIPVHITATSEPVPISEESEELDQKTFSVCKE
RMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLW
IFVSKFTEFDARKLHKLYKHAIKKRQESQQHSVQNISSNVNTHVIRNPDVERLKENTNHD
DSSRDSYSSDRHLSQYHDHHKDRHQGDAYKKSDSRKRSYSAFSNGKDHRDWDHYKQDSRY
YSDSKHRKLDDHRSRDHRSNLEGSLKDSRAHSDHRSHSDHRIHSDHRSTSEYSHHKSSRD
YRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSWKT
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagacattgtaagaaacagtagtggagagtcaagccaatcg
gatgatgattctgggtcagcaccagcttctggatctggttcaagctctggaagcagtagt
gatggaagtagcagtcaatcaggtagcagtgactctgagtctggttcagagtcaggcagt
caatcagaatcagagtctgacacatctagagagaagaaacaagttcaagctaaaccccca
ccaaaagttgatggatctgagttttggaagtccagtccaagtatacttgctgtgcagaga
tcggcagtgctcaagaagcaacagcagcagaatgcagcctcatcagacagtggttcagaa
gaggattcatcgagtagtgaagattctgcagatgactcttccagtaaaaccaagaagaaa
aaacatagagatgaagactggcaaatgtctgggtcagggtcggtatcaggaactggttct
gattctgaatcagaggaagatagagagaaaagcagttgtgaagatagtgaatctgactat
gagccaaaaaacaaggtcaaaagccagaaacctccaagcagaattgagccaaaaagcagc
aaaaagattgcaggacagaaaaagaggcagcttgattcatcggatgatgatgactatgac
aagagaggatctcgtcgccaggcaacagtcaacattagttacaaagaagctgaagaaacc
aagacagattctgatgatttgctagaagtttgtggagaagatgtcccacaaactgaagaa
gatgaatttgaaactatagagaagtttatggatagtcgaattggccgaaaaggagccact
ggtgctgcaaccaccatctatgcagttgaggcagatggtgacccaaataccgggtttgaa
atgtcaaaggagctaggagaagtacagtatcttattaaatggaaaggctggtcacacatc
cataatacttgggaaactgaggaaacactgaagcaacaaaatgttaaaggaatgaagaaa
ctggacaactataagaaaaaggatcaggaaacaaaacgctggctgaaaaatgcttctcca
gaagatgtggaatattataactgccagcaggaacttacagatgatctacataaacagtat
caaatagtggaaagaataattgctcattcaaatcagaaatcagcagctggttatccagat
tactattgcaaatggcagggtctgccttactcggaatgtagctgggaagatggtgctctc
attgccaaaaaatttcaggcatgtattgatgagtattttagcagaaatcaatccaagacc
actccatttaaggactgcaagattctaaaacagaggccgaggtttgttgcactaaagaag
caaccatcttatattggaggacatgagagtttagagttaagagattatcagttaaatgga
ctgaattggcttgctcactcgtggtgcaaagggaatagttgtattcttgcagatgaaatg
ggtctgggtaaaacaatacaaacaatttcttttctgaactacctgtttcacgaacatcaa
ctgtatggacctttcttgctagtcgtgccactttctaccttgacatcttggcaaagagag
attcaaacttgggctcctcagatgaatgctgtggtttacttaggagatataactagtaga
aatatgataagaactcatgaatggatgcatccacagaccaagcgattaaaatttaatata
cttctaacaacttatgaaattttgctgaaggataagtcattccttggtggtctgaattgg
gtatttataggagttgatgaagctcatcgtttaaaaaatgatgattcccttctgtataag
actttaatagactttaagtctaatcatcgtcttcttattactggaacccctctgcaaaac
tccctcaaggagctttggtctttgctgcacttcatcatgccagaaaagttttcttcctgg
gaagattttgaagaggagcatggcaaagggagagagtttggttatgcaagtcttcacaaa
gaacttgaaccatttctactcagaagagttaaaaaagatgtagaaaagtctttacctgca
aaggttgaacaaattttgaggatggaaatgagtgcattgcagaagcaatattacaagtgg
attttaaccaggaattataaagccctcagtaaaggttcaaaaggcagtacctcaggcttt
ttgaacatcatgatggaactcaagaagtgttgtaaccattgctacctcattaaaccacca
gatgataatgaattctataataaacaggaggccttacagcatttaatacgtagcagtggg
aaactaatccttcttgacaagctactgattcgtctacgagaacgtggcaacagagtgctg
attttctctcagatggtgaggatgctagacatcctagcagagtatttgaagtatcgtcag
tttccctttcagaggcttgatggatcaataaaaggggaattgaggaaacaagcactggat
cattttaatgcagaaggatcagaggacttctgctttttgctgtctaccagagctggggga
ttaggtataaacttggcatctgctgacactgtagttatatttgattctgactggaatcca
cagaatgatcttcaagcacaggctagagcccatagaattggacagaagaaacaggttaat
atttatcggctagttacaaaaggatcagtagaagaagatattcttgaaagagccaagaaa
aagatggtgttagatcacttagtaattcagagaatggacacaacagggaaaactgtacta
catacaggctctactccttccagctcaacaccttttaataaggaagagttatcagcaatt
ttgaagtttggtgccgaggaactttttaaagaacctgaaggggaagaggaggagcctcag
gaaatggatatagatgaaatcctgaagagagctgaaactcgagaaaatgagccaggcccc
ctaactgtaggagatgagttgctttcacagttcaaggtagctaacttttccaatatggat
gaagatgacattgagctggaaccagaacaaaatttaagaaactgggaagaaatcattcca
gaagtccagcggcgacgaatagaagaggaagaaagacaaaaagaacttgaagaaatatat
atgctcccaaggatgagaaattgtgcaaaacagatcagcttcaatggaagtgaagggaaa
cgcggtaggagcagaagatattctggatctgatagtgactccatctcagaaagaaaacga
ccaaaaaaacgtggacgaccacgaactattcctcgagaaaatattaaaggatttagtgat
gcagagattaggcggtttatcaagagttacaagaaatttggtggcccacttgaaaggtta
gatgctatagctagagatgctgagctagttgataaatctgagatggaccttagacgtcta
ggagaacttgtacataatggatgcattaaggctttaaaggacaattcctttggacaagaa
agagcaggaggtagacttgggaaagttaaaggcccaacattccgaatatcaggagtgcag
gtgaatgcaaagctagtcatctctcatgaagaagagttggcaccattacacaaatccatt
ccttcagatccagaagaaaggaaaagatatgtcatcccgtgccacaccaaggcagctcat
tttgatatagattggggtaaggaagacgattccaatctgttaataggtatctatgaatat
ggctatggcagctgggaaatgataaaaatggatcctgatctcagtttgacacagaagatt
ttacctgatgatccagataagaaacctcaggccaagcagttacagacccgtgcagattac
ctcattaaattactgaataaagaccttgcaagaaaagaagcgcaaagacttactggtgca
ggcaattcaaagaggaggaaaacaagaactaagaagaacagagcaatgaaggctgcaaaa
attaaagaagaaataaaaagtgactcctcatcaccaccctcggaaaaatctgatgaagat
gatgaggacaatgaggatgagattgtttcagtgaaacatacacataaaaaaataaaagca
gaagaaaatgaagaaaagcctgagccagatattggtataaagaaggaagctgaagaaaaa
agagagacaaaagaaaaggaaaataagagggatttgaaaagggagaaaaaagaaaaagag
gataagaaagaattaaaaaatattaaagaaaagagagaaaacaaagtaaaagaatctgca
cagaaagaaaaagaagtaaaggaagaaaaggtaaatgaaatcaaatctgaaaataaagaa
aaaaataaaaaagtttcattgttggatattccagttcatattactgcaactagtgaacca
gttcctatatctgaagaatctgaagaactggatcagaagacattcagtgtgtgcaaagaa
agaatgaggcctgtcaaagcagcattgaaacaactggatagaccagagaaaggcctttct
gaaagggaacaactggagcatactagacagtgcctaatcaaaattggggaccacattact
gaatgtctaaaggagtacacaaatcctgaacaaattaaacagtggagaaaaaacttgtgg
atttttgtctccaagtttacagaatttgatgccagaaagctgcacaagctgtataaacat
gcaatcaaaaaacgccaagaatctcagcaacacagtgtccagaatattagcagcaatgtg
aatacacatgtaattagaaatccagatgttgaaagactgaaagagaatacaaaccatgat
gacagtagcagggacagttattcttctgatagacatttgtcacaataccatgatcatcat
aaggacaggcatcagggagatgcttataagaaaagtgactctaggaaaaggtcctattca
gccttcagcaatggaaaagaccacagagactgggatcactataaacaagacagcagatac
tatagtgatagtaaacatagaaagttggatgaccacaggagcagagatcacaggtcaaac
ctggaaggaagtttaaaagacagccgggctcattcagatcaccgttcccattcagaccac
aggatacattcagatcaccgttccacttcagagtacagccatcataaatcttctagagat
tataggtaccactcagactggcaaatggaccacagagcttcgggtagtggcccaaggtca
ccattagatcagaggtctccttatggttcaagatctcccctaggacacagatctccattt
gaacactcatcagatcacaaaagtacacctgaacatacatggagtagctggaaaacataa
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integrated database retrieval system
