Charadrius vociferus (killdeer): 104281918
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Entry
104281918 CDS
T08577
Symbol
LAMA1
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04510
Focal adhesion
cvf04512
ECM-receptor interaction
cvf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104281918 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104281918 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104281918 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
104281918
NCBI-ProteinID:
XP_009878281
LinkDB
All DBs
Position
Unknown
AA seq
3040 aa
AA seq
DB search
MFCKLVEHVPGRPLRNAQCRVCDRHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWV
TITLDLRQVFQVAYVIIKAANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITP
RIGPPTYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLR
LQRIRTLNADLMTLSHNDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKK
LQCQCEHNTCGESCNKCCPGYHQKPWRPGTISAGNKCEKCNCHNKAEDCYYNQSIADQKR
SMDIHGQYIGGGVCLNCTQHTTGINCEMCADGYFRPHKVSPYEDHPCYPCACDPFGSLSS
NCIKDEHHSDSQHGTWPGQCQCREGYIGEKCDRCAFGYRGYPNCLRCNCSLIGSINEDPC
TEPCLCKENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLTWPISQISDMTG
WLVTDLYNARSVQPQRSQFDGPRQISINNTEAVKVLKHTYYWSAPEPYLGNKLTAFGGDL
KYTVSYDIPMDSVDSDIVSSVDVIIQGNGQILSTRAAGLSLQPYEEYSNAVRFVSENFID
FNTKKAIDRERLMTVLVNVTHLLIRANYNIAKKAVYRLDSVTLDTANANVIDLSSAPDVE
FCECPQGYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCIACQHNTTGP
FCDQCLPGFYGSPSQGTSEDCQPCACPLSSAANNFSPTCQLSEGGGIVCDKCLPGYTGSQ
CERCANGYYGNPLVPGQSCTPCECNGNVNPQEDDHCDTVTGQCLKCLGNTAGHHCEKCAD
GYYGDAVTEKSCHACECHVNGSLSSTCHHETGFCQCKSNVIGERCDKCLNGYYGLLTGLG
CIPCNCSQFGSVSEDCNHEGQCHCVPGVAGEKCDRCAYGFHAFQNGGCTPCDCAHTQNNC
NADSGQCICPPHTQGPKCELCEENHWGLSPKLGCKACNCSDTGSTSLQCDVLTGQCQCKV
EFGGQDCSRCALGYRDYPDCVACDCDLSGTKAEMCDDTEGLCGCEEETGICTCKENVFGL
QCSECKPGTFALSANNALGCTPCFCFGMSTFCSELEDHVRIPITLTPDQSVLHVVAQSNL
TGTVEGVFSQFPDVLLDAAIVRKYLNTETFYWRLPQQFQGDQLMAYGGKLRYTVAFYALD
GFGTSNFEPQILMKGGHTSKLVIYVDIPSPENGVRTDKEVEMKEDSWRYFNSVSDEPVLR
SDFMSVLSNVEYILIKAAYGQGLQQSRIANISMEIAVKFEEMHLGRARAHLVEQCRCPPG
YAGLSCQSCAPGYYRGKHTELSVKEPHTLITPCVPCQCNNHSETCDPETGKCLNCRDNTV
GDYCSACAPGYYGKVTGSVNDCSLCACPRANPVSFSPTCVLKGVRDYHCDACLPGYEGQY
CERCSLGYYGDPQLPGGSCHPCRCNPSGSVHVNCDRATGQCLCKQGVTGQLCEECELRHL
LVEDECVSCDDNCTGVLLNSLDNLNKAILSVNLTGVARVPYGILSELENATKHLKGSIVP
REDPVYSLTTAKESLLNLSGRIDQLHEKSSRFLKKAWQLNTMTQKTRSKSQELTGFIDTV
HTTTKVLAEVAMSLNETLGLDLPLSNATSQSLQDDISALLDALRKKDFVQQHHNATSVLK
AAENLLIRVQKEYLKPQQELAELKKDASQLLSKHNSRLQDAQDLVNKALANINETNRLFP
LISSNLAELNDKKLNIKESEEVSTMLIKEGKVLVNVAAALAQDVKNSTSNLEVHQDGFVL
WSTKLRHHVDELVMQMSVRGVLDLVYRAEDHAAQFQRLADALESGLSKVRNVTLNTTAAV
YTHSSVKSVIERTESLADDASRVMNGPLDLPEESLSLLGKETLLLSSKFQNEAKNLNKKS
DGLLFGLNGLHKKVEKIQKSTNKIVNQLNDSLLTLRALPNDTRKYMLEVKELAVSANTSS
VVGLSHFGDFSQKLLNTSSTLSRVNDTLRKTSELITDSSKAAITAEKQVKEVEAQASLLL
DRLKPLKMLEENLNRNLSEIKELISQARKQAASIKVAVSADRDCIRAYKPQISSTNYNTL
TLNVKTAEXDNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGSTRVEYPDFQIDNNKWH
RIHATRFGKTGTLSIEEMNSNQKPSSKSATSPGTASILDVNKSTLMFIGGLGGQIKKSPA
VKVTHFKGCMGEAALNGKSIGLWNYMEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKAL
RSTVTQIIIFFSTFSPNGLLLYLASNGTRDFLSLELLDGKVRLTVDLGSGPLALTTENRY
NNGTWYKISFSRNKKQGILAVMDAYNLNYKETNXPGVPSDLTRSDKDPIFIGGLPRSRTV
RKGLNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIRSVNILNNGYIELVPKSLS
PESELMATFATKNSSGIILAGLSRGLEKRRRRQAHLPFFSITLIDGHLAVHVNAGDKAST
RKVILKSPNGTYSDGQEHSVILIRNKRIITVQVDEGNPAELRLGLSAEMSPLNISNFYAG
GIPAGEGILGLKMAGSFHGCISNLIFNKELLYFTTSMKYEHVDMDSCFLSEKPKPAIKPE
DIEIQHELQALPVPLRPLTDTKKVVCAKDELPDRVQGAHQFGLAKGSHLALLFNQSTVRK
KLSVQLNLRTFASSGLIYYMAHENQVDYAALQLHGGQLYFSFDLGKGKAVAFHPAVISDG
KWHTIKTEYMKRKGTITVDGQELVAVSALGDGSTLDVEGKLYVGGLPLDYVPKNLGNVTH
SIPACIGSMTINSKQLDNESPVSIFAVNKCYVTVQDGTFFDGSGFAALVREGYKVRSDVN
ITLEFRTTALHGVLLGVSSAKVDAIGLEIVNGKVLFHVNNGAGRLTATYEPRGMNSLCDG
KWHKLQANKSKHHISLIIDGNLVQTDNPYIQSTSADTNNPIYVGGYPADVKQNCLTSKSS
FHGCLRNLVLTKGQQAELFDFSRAFDLRGVFPHSCPGAEH
NT seq
9123 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcaaactggtggagcatgtcccaggacggcccctgcgcaacgcccagtgccgt
gtctgcgaccgccacagtgccaatcctaaagagcagcatccaatatccagtgcaatcgat
ggtaccaataactggtggcaaagtcccagcattcagaatgggaggcaataccactgggtc
accatcaccttggatttaaggcaggtctttcaagttgcatatgtcatcatcaaagctgct
aatgctccacgacctggaaactggattttggaacgctccatagatggcacagagttcaga
ccatggcagtactatgcaattagcgataccgaatgtttaactcgttataatattacgcca
agaattgggccgccaacttacaagagagatgatgaagtgatctgcacctcctattactcc
agacttgttcccctggaacatggagagattcacacatcactgatcaacggtaggcctagc
gctgacgatccttcacaaaagcttttggagtttacttctgcacgatatattcgcctacga
ctgcagcgtattagaactcttaatgctgacctcatgactctcagccataatgatcctaaa
gaactagaccccattgttaccagaaggtactactattcaataaaggacatctctgttggt
ggcatgtgtatttgttatggccatgctcgaagctgccccctggatgaaatcacaaagaaa
ttgcagtgccagtgtgaacacaacacctgtggagagagctgtaacaagtgctgtccgggc
taccaccagaaaccttggagaccaggaaccatttctgctgggaacaaatgtgagaagtgc
aactgtcataacaaagcagaagattgttattacaatcagagtattgcagatcagaaaagg
agcatggatattcatggccagtatataggaggtggcgtgtgtttaaactgcactcaacat
actactgggatcaactgtgaaatgtgtgctgatggatattttagaccacacaaagtttct
ccctatgaagatcacccctgctatccctgtgcctgcgacccattcggctctctgagttct
aactgcattaaagatgagcaccattctgactcacagcatgggacttggccaggtcagtgt
caatgcagagaaggttacataggagaaaaatgtgatcgttgtgcgtttggatatcggggc
tatccaaactgcctgcgttgcaactgcagcctgattggtagcattaatgaagatccatgc
acagaaccttgtctttgcaaagaaaacgtagaaggtgaaaactgtgatctctgtaaacca
ggattctacaatttgcaagaaagaaatcctcagggctgcacagagtgtttctgctttggg
gtttctgatgtctgtgacagcctaacatggcccatcagtcagatatcagacatgactgga
tggcttgttactgatctgtataatgcaaggagcgtgcaacctcagcgaagccaatttgat
ggaccccgtcaaataagtattaacaacactgaggctgtgaaagtactgaaacatacttat
tactggtcagcacctgagccatatctaggaaataaactcacagcttttggtggagacttg
aagtatacagtatcttatgacattccaatggatagcgtggacagtgatatagtatctagt
gtggatgtcatcattcagggtaatggacagattttgagcacaagagcagcgggcttgtcg
ttacagccgtatgaggagtactctaatgcagtgagatttgtatcggagaatttcatagac
ttcaatacaaaaaaagctatagaccgggaaaggctgatgactgttctggtaaacgtgacc
catcttctgatcagggctaactacaacattgccaaaaaagctgtgtataggctggactct
gtgacgctggatactgcaaatgcaaatgttatagatctttcttcagcaccggatgtggaa
ttctgtgaatgtcctcaaggttacacaggaatatcctgtgagtcctgtctccctgggtac
taccgcgtggatggaatactctttggaggtatttgtcaaccctgcaaatgcaatgggcat
gcgactgagtgtgatatccatggtgtttgcattgcttgtcaacacaacacgacaggacct
ttctgtgatcagtgcttgcctggcttctatggaagtccatcccaagggacttctgaggac
tgccagccctgtgcatgtcctctgagttctgctgcaaacaatttcagtcctacttgccag
ctgagtgaaggaggtggaattgtctgtgacaaatgtcttccaggctatactggttctcag
tgtgagaggtgtgctaatggttactatggaaatccacttgtgcctggacaatcatgtact
ccttgtgaatgcaatggcaatgtaaacccacaagaagatgaccactgtgataccgtcaca
ggacaatgcctgaaatgcttggggaatacagcaggtcaccactgtgaaaagtgtgcagat
gggtattatggggatgcagtgactgagaaaagctgtcatgcctgtgagtgccatgtgaac
ggttccctttcaagtacttgtcatcatgagacaggcttctgtcagtgtaaatcaaatgtg
atcggagaaagatgtgataaatgcttgaatggttattatggcttacttactgggcttgga
tgcattccttgcaattgcagtcagtttggctccgtttctgaggactgcaatcatgagggg
cagtgtcactgtgtaccaggagtggctggagaaaagtgtgatcgttgtgcttatggcttt
catgcgttccagaatggtggctgcacaccctgtgactgtgctcatactcagaacaactgt
aatgctgattctggccaatgcatttgtccccctcacactcagggaccaaaatgtgaactc
tgtgaagaaaatcactggggactctctcctaaacttggctgcaaggcttgcaactgtagt
gacactggttcaaccagtctccagtgtgatgtattgacgggtcaatgccagtgcaaagtt
gaatttggagggcaagactgttccaggtgtgcattgggctacagggactacccggactgt
gttgcctgtgactgtgacttgagtggaaccaaagcggagatgtgtgatgacactgaagga
ctttgtggttgtgaagaagaaactggcatctgtacctgcaaggaaaatgtatttggtcta
caatgcagtgagtgtaaacctggaacttttgctctgtctgctaacaatgcactaggttgt
actccgtgcttctgtttcgggatgtccacattttgttctgaactagaagatcatgtgaga
attcctataaccttgactccagatcagtccgttctgcacgtagtagctcaaagtaaccta
actggaacagtggaaggagtattttcacaatttcctgatgttttactggatgctgccata
gtcagaaaatacttaaatacagaaacgttttactggaggttaccacagcagttccaggga
gaccagctcatggcctatggagggaagctgagatacactgttgctttttatgctttggat
ggctttggaacctcaaattttgagccacagatcctaatgaagggaggtcacaccagcaag
ttggtcatctatgtagacatcccttctccagaaaacggagtaagaactgacaaggaagta
gaaatgaaggaggattcttggaggtattttaactctgtatctgatgagcctgtcttacgt
tctgacttcatgtctgtgctaagcaatgttgaatatatccttatcaaggcagcttatggc
caaggattacagcaaagcagaattgcaaatatctcaatggaaattgcagtgaagtttgaa
gaaatgcatctaggcagagccagagctcatcttgtagaacaatgtagatgtcctcctggt
tatgctggattgtcctgtcagagctgtgctccaggatactacaggggaaagcatacagaa
ctcagtgtaaaagagcctcacactctgataacaccttgtgtgccatgtcagtgcaacaac
cacagtgaaacctgtgatcccgaaactggaaagtgcttgaactgcagagataacacagtt
ggtgattactgcagtgcttgtgccccaggctactatgggaaagtcactggatctgtcaac
gactgctctctttgtgcctgtcccagggccaaccctgttagttttagtcccacttgtgtc
ctgaaaggtgttcgggattaccactgtgatgcctgtctcccagggtatgaagggcagtac
tgtgaaagatgctcccttggctattatggtgaccctcagcttcctggtggcagttgccat
ccgtgtcggtgcaatccaagtggttctgttcatgttaattgtgatcgtgcaactggccag
tgcctctgtaagcaaggcgtgacaggacagctctgtgaggagtgtgaactgagacatctt
cttgtggaagacgagtgtgtttcttgtgatgacaactgcacaggagttttgttaaacagt
ttggataatctcaacaaagccatactttcagtgaacctcactggtgttgctcgtgtgccc
tatgggatattgtcagagttggagaatgcaacaaaacatctgaaggggtctatagttcct
agagaagatccagtttactcattaactacagcaaaagaaagtcttctgaatttatcaggc
agaattgatcagctgcatgaaaagtcatctagatttttgaaaaaagcttggcaacttaac
acaatgactcagaaaaccaggagtaaaagtcaagaactgactggatttattgacacagta
catacaaccaccaaagtacttgctgaagttgctatgtcactaaatgaaacactgggcctg
gatctcccgctgtcaaatgctacatctcagagcctgcaggatgatatttctgcccttttg
gatgccttgcgcaagaaagattttgttcaacagcaccataatgccaccagtgtcctaaaa
gctgcagaaaatctgttgatccgggttcagaaagagtatcttaaaccccagcaggagctt
gctgaactaaaaaaggatgcaagccagctcttatcaaagcacaacagcagactgcaagat
gctcaggacctggtgaataaggcgcttgctaacatcaatgagaccaatcgcttgtttcct
cttatctctagcaacctggcagagttaaatgacaaaaagctaaatataaaggaaagtgaa
gaagtctcgaccatgctcattaaagaagggaaggtcctagtgaacgttgctgctgctctt
gcccaagatgtaaagaactccacatctaacctggaggtccaccaggatgggttcgtccta
tggagcaccaaactgcgacaccacgtggatgaactggtgatgcagatgtctgtgagagga
gtgcttgacctggtatacagagccgaggaccatgctgcccagttccaaagacttgcagat
gcactagagagtggtctctctaaagtaagaaatgtgactctgaacacaactgccgctgtc
tacacccactccagtgttaaaagtgtcattgaaagaacagagagtttggcagatgatgca
tctagagttatgaatgggcccttggatttacctgaggagtctctcagtcttcttggaaaa
gaaactctactgcttagctccaaatttcagaatgaagcaaaaaatctgaataaaaaaagt
gatggccttttatttggattgaatgggttgcacaaaaaggtagaaaagattcagaaaagt
acgaataaaattgtcaaccagcttaatgattccctgttgacactaagagcattgcctaat
gatacaagaaaatacatgcttgaggtgaaagagttggctgtgtctgcaaacaccagtagt
gtggtgggtttaagtcacttcggggatttcagtcaaaagctgctgaatacttcttctaca
ttgtcccgagttaatgacacattgaggaaaactagtgaacttataactgattcatcaaaa
gctgcaatcacagctgaaaaacaagttaaagaagttgaagcacaagcaagtcttttattg
gataggttgaaacctttgaaaatgctggaggagaacctgaacagaaacctgtctgaaatt
aaagagctcatcagccaggcccgcaagcaggcagcatctattaaagttgcagtatcagca
gacagagattgcattcgtgcctacaaaccccaaatttcatctactaattacaacacctta
actctcaatgtgaaaactgctgaancagataacctccttttttacctgggtagcaatgga
aagacagacttccttgcggtggagatgcgacgtggtaaggtagctcttctttgggatttg
ggctctggatcaacaagagtggaataccctgattttcaaattgacaataacaaatggcac
agaatacatgctaccaggtttggaaaaacgggtacgctcagcatagaggaaatgaactcc
aatcagaagccttcatctaaatctgcaacctctccagggacggccagcatactggatgtt
aacaaatcaaccctaatgtttattggaggactcggagggcaaattaagaaatcacctgct
gttaaggtgacccattttaaagggtgcatgggagaggcagccctgaatggcaaatctatt
ggtctttggaattacatggaaagagagggcaaatgcaatggctgttttggaagcccacag
gatgaggatacttcattccattttgatggcagtgggtactcagttgtggagaaggcactc
cgctcaacagtgactcagataataatatttttcagtaccttttcacctaatgggcttctt
ctgtatcttgcttcaaatggcactagagatttcttgtcccttgagcttcttgatggcaaa
gtgagactgactgttgatctaggttcaggacctcttgctcttacaacagaaaatcgttac
aacaatggaacatggtataaaatttcgttcagtcggaacaagaaacaaggaattttggca
gtcatggatgcatataaccttaattataaagaaaccaatngtccgggggttccctcagac
ctgacccgctctgataaggacccaatcttcattggtgggctgccacgatcgaggactgtg
aggaaaggtcttaatagtagaatgtatgtgggatgcatcaagaatctggaaatatcccgt
tcaacctttgacttgcttagaaattcatacggagtaagaaaaggctgtgtattggagcct
attcgtagtgtgaacatcttgaacaatggatatattgagttggtacctaagtccttaagc
ccagaatcagaactgatggcaacttttgctacaaagaacagcagtggcatcatccttgct
ggactcagcagggggctggaaaagcgacgacgtagacaagcccatttgcccttcttttct
atcacgctgattgatggccatcttgcagtgcatgttaatgctggagataaagcaagtact
agaaaagtaattcttaagtctcctaacggaacatacagtgatggacaagagcactctgtc
atcctaatccggaataagaggatcataacggtacaggtggatgaaggtaaccctgcagaa
ctaagacttggcttatcagcagaaatgagccccctgaatatttccaacttctacgctggt
ggcattccagcaggagagggcatcttagggctaaaaatggctggctcatttcacggctgt
atcagcaatcttatttttaacaaggagcttttgtatttcaccacttccatgaagtatgaa
catgtggatatggacagctgctttttgtcagagaagcctaaaccagctataaagccagaa
gacattgagattcaacatgaacttcaggctttaccagttcccctgaggcctcttacagac
acaaaaaaggtagtttgtgcaaaagacgagctaccggatcgtgttcaaggtgcccatcag
tttggacttgccaaaggcagccacttggcactgcttttcaatcagtctactgtcaggaag
aaactttctgtccagctgaatctcagaacctttgcctccagtggcctgatttactacatg
gctcacgagaaccaggttgactatgcagccctacagcttcatgggggacagctctatttc
tcatttgatctaggcaaaggaaaagcagtagcttttcaccctgctgttatcagtgatgga
aaatggcatacgataaagacagaatacatgaaaagaaaaggtacaatcactgtggatgga
caggaattggtagcagtcagtgctctgggagacggtagcactttggatgtggaggggaag
ctctacgtgggaggactccccttagactacgtgccaaagaatcttgggaatgtgactcac
agtattcctgcctgcattggtagcatgacgattaacagcaagcaactggacaacgagagc
cctgtctctatctttgctgtgaataaatgctatgtaacagtgcaggacggtactttcttt
gatgggagtggctttgctgcgcttgtcagagaaggttacaaagtccggtctgatgtgaac
atcacgctggagtttcgtacaacagcgctgcatggcgttcttctcggggtcagcagtgct
aaggttgatgccattggactggagattgtaaatggcaaggttttattccatgtcaacaac
ggagctggcagactaacagctacatatgaaccaagaggcatgaatagtttgtgtgatgga
aaatggcacaagcttcaagcaaataaaagcaaacatcacatttcactgataattgatggg
aatttggttcaaactgataatccctacatccagtcaacctctgcagatacgaacaatccc
atttatgttggaggctatcctgctgacgtgaagcaaaactgcctcacaagcaagagctca
ttccatggctgtttgaggaacctcgtgttgaccaagggccaacaggcagaattgtttgac
ttcagcagagcttttgacctgcgtggagtctttcctcattcctgccctggggctgagcac
tga
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integrated database retrieval system