Charadrius vociferus (killdeer): 104281967
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Entry
104281967 CDS
T08577
Symbol
SSRP1
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvf03000
]
104281967 (SSRP1)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104281967 (SSRP1)
Transcription factors [BR:
cvf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
104281967 (SSRP1)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
104281967 (SSRP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
Motif
Other DBs
NCBI-GeneID:
104281967
NCBI-ProteinID:
XP_009878333
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
NDGRLRLSRQGVIFKNSKTGKVDNIQASELAEGVWRRVALGHGLKLLTKNGHVYKYDGFR
ESEFDKLSDFFKAHYRLELAEKDLCVKGWNWGTVRFGGQLLSFDIGEQPVFEIPLSNVSQ
CTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEAFAQNVLSKADVIQATGDA
ICIFRELQCLTPRGRYDIRIYPTFLHLHXXXXXXXXXYTTVLRLFLLPHKDQRQMFFVIS
LDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEGRLTKNMSGSLYEMVSRVM
KALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDEISFVN
FARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKNRGLKEGMKQSY
DEYADSDEDQHDAYLERMKEEGKIREENANDSSDGSGEETDESFNPGEEDDDVAEEFDSN
ASASSSSGDGDSDRDEKKPAKKAKIVKDRKPRKKQLESKKGKDPNAPKRPMSAYMLWLNA
SREKIKSDHPGISITDLSKKAGELWKAMSKEKKEEWDRKAEDARRDYEKAMKEYSVGSKS
ESSKADRSKKKKKKQEKQTKGKVEKKGAASKSSSSTKSPAKNMSESFKSKEFVSSDESSS
GESKKEDSEEEGAPSPPPSSEESASGCPG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
aacgacgggcggctgcggctgagccgccaaggcgttatcttcaagaacagcaagacgggg
aaggtggacaacatccaggcctcggagctggccgagggcgtgtggcggcgtgtggcactc
ggtcacggcctcaagctgctcactaagaacggccacgtctacaaatacgatggttttcgg
gaatcggagttcgataagctctcagatttcttcaaggcccactatcggctggagctggcg
gagaaggacctgtgcgtgaagggttggaactgggggacggtgaggtttggagggcagctg
ctgtcctttgacatcggggagcagccggtgttcgagatccccctcagcaacgtctcccag
tgcacaacgggcaagaacgaggtgacgctagagttccaccagaacgatgacgctgaggtc
tcgctcatggaggttcgcttctacgtgcccccgacgcaggaggacggcgtggaccccgtg
gaggccttcgctcagaacgtcctctccaaggcggacgtgatccaggccaccggcgatgcc
atctgcatcttccgggaactgcaatgtctgacgcctcgcgggcgatacgacatccgtatc
taccccaccttcctgcacctccacntgaannnnnnnnnnnnnnnnnnnnnntacacgacc
gtgctgcgcctcttcctgctcccgcacaaggaccagcggcagatgttctttgtgatcagc
ctggaccccccgataaagcaaggccagacccgctaccacttccttatcctgctcttctcc
aaggatgaggacatctcgctgaccctcaacatgaatgaggaggaggtggagaagcgcttc
gaggggcggctcaccaagaacatgtcggggtccctctacgagatggtcagccgggtcatg
aaggcgctggtgaatcgcaagatcaccgtgcctggcaacttccagggacactccggagcc
cagtgcatcacctgctcctacaaggccagctcggggctcctctacccgctggagcgcggc
ttcatctacgtgcacaagccgcccgtgcacatccgcttcgacgagatctccttcgtcaac
ttcgcccgcgggaccaccaccacccgttccttcgacttcgagatcgagaccaagcagggc
acgcagtacaccttcagcagcatagagagggaggagtacgggaagctctttgacttcgtc
aacgccaagaagctgaacatcaagaaccgaggcctcaaggagggcatgaagcagagctac
gacgaatacgccgactccgatgaggaccagcacgatgcctacttggagaggatgaaggag
gagggcaagatccgggaggagaacgccaacgacagcagcgacggctctggggaggagacg
gatgagtccttcaaccccggagaagaggatgacgacgtggctgaagagtttgacagcaac
gcctcggccagctcctccagcggtgatggtgacagtgaccgggacgagaagaagccagcc
aagaaggccaagattgtcaaagaccgcaaaccccgcaagaagcagctggagagcaagaaa
gggaaagaccccaacgctcccaagcggccgatgtcagcgtacatgctctggctgaacgcc
agccgagagaagatcaagtcagaccaccctggcatcagcatcacagacttgtccaaaaag
gccggggagctctggaaagccatgtccaaggagaagaaagaggagtgggatcgcaaggcg
gaagacgcccggagggactacgagaaggccatgaaggagtacagcgtgggcagcaagtcc
gagagctccaaggcggacaggtctaaaaagaagaagaagaagcaggagaagcagacgaag
gggaaagtggagaagaaaggcgccgcctccaagtcttcgtcctccaccaagtcccctgcc
aagaatatgagcgagagcttcaagagcaaggagttcgtctccagtgacgagagctcctcc
ggagagagcaagaaggaggactcggaggaggagggggcgcccagcccgccccccagctcg
gaggagtcggcgtccggatgtcctgggtga
DBGET
integrated database retrieval system
