Charadrius vociferus (killdeer): 104282047
Help
Entry
104282047 CDS
T08577
Symbol
FAM188B
Name
(RefSeq) protein FAM188B
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104282047 (FAM188B)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104282047 (FAM188B)
Ubiquitin system [BR:
cvf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
104282047 (FAM188B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
104282047
NCBI-ProteinID:
XP_009878417
LinkDB
All DBs
Position
Unknown
AA seq
773 aa
AA seq
DB search
MDNSFVEEVAASLVREFLSRKGLKKTITTMDRELPRSALSINNRNELRNVLHLHSLYKHN
KAKENPLKTLLEIITNYFLEHRATSRSISSSSALSAPQSKSAASHPPDFSDEDHMRGSAT
TLDESKTQGYRYDAENPLDKILPSRKHQHRSEKCHTGTIHNSHLPCDGDKKLKDSREDLK
AGTISEEMKSTVKEKPRLRSGLIVRGMMAGPVASSPEDLQKRRLPKLSTSISSTAQLKGE
EHEENDLNVPSTDFQESKGSSTQVDTKFASKTMSSSHTSSASEKLRNIPKDTDDSFAKLL
TEKERSKAEERKSVPSSGTDSNEKSLKVSVPHRHSGAGKEKRERSLKKNESQSSGHRKSP
TSTCSKEDQMKDVLELVDVEEEETTGEVSKNPYLSTLHMLQVVSKPIDISLAKELKNLLF
GSSLCCFSEEWKIQSFTFNNIPQLKYGIVQKKGGPCGVLAAVQACVLQQLIFADSNRNKD
TRCLQPSEVHRTKCLTMAIADILWRAGGNEKAIVALPSGRQQFTPVGKYKADGILETLIL
HSATRYEDLIVFLQQNIRQFETGPCGCILLTVSVILSRSINLVRNDFDVLTNRLIGSHGY
CTQELVNLLLTGKAVSNVFNNVIELDSGNGNITILKGVTSRSDIGLLSLFEHYDVCQVGC
YLKTPKYPIWLVCSESHFSVLFCLEKDLLGDWKTERRFDLLEKDLLGDWTERRFDLYYYD
GLANQEEEIRLTVDTTQMCTEDKENDLTPPLEHCIRTKWQGAVIDWNGTEPIL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atggacaactcctttgtggaagaagtggctgcatcactggtgagagaatttctcagtaga
aagggtttgaagaaaaccatcactaccatggaccgggagcttccacgctctgcccttagc
atcaataacaggaatgaacttcgaaatgtcctacatctgcactccttgtacaaacacaac
aaggcaaaggagaacccactgaaaacacttcttgaaattattactaattacttccttgag
caccgtgcgacttctagaagcatcagttcaagttctgctctctcagctcctcaaagtaag
agtgcagcatctcatccacccgacttttcggatgaagaccacatgcgtgggagtgccact
acgctcgatgaaagcaaaactcaaggctacagatatgatgctgagaatccactagataaa
atccttccatccagaaaacatcagcacagaagtgaaaaatgccacacagggacaatacac
aacagccacttaccctgtgatggggataagaaattaaaagatagtcgagaagatttaaaa
gcaggaacgatttctgaggagatgaaatccacagtgaaggagaagccaaggctcaggtct
ggtctcattgtcagaggaatgatggctggaccagtagcaagttcaccagaggatctgcaa
aaaaggaggcttccaaaactatccactagcataagtagcacagcacagctcaagggtgaa
gaacatgaagaaaatgacctgaatgtcccaagtaccgattttcaagaaagtaaaggatct
tcaacacaagtagatacaaagtttgcatcaaagactatgtcaagctcacacacaagttca
gcctctgaaaaactcagaaacatccccaaagatacagatgactcttttgccaaactgctg
accgaaaaagagaggagcaaggcagaagaaagaaaatcagttccaagctctggtacagac
agcaatgaaaaaagccttaaagtgagtgtccctcacagacattcaggggctggaaaagag
aagagagaaaggtcactcaagaaaaatgagagtcagtcgtcaggccacaggaaatctcca
acatccacttgctctaaagaagaccagatgaaagatgtcctagaattagttgatgttgaa
gaagaagaaacaaccggagaagttagtaagaacccgtatctttcaacactgcatatgctt
caagtagtatcaaaaccaattgatatttctcttgcaaaagaattaaagaatcttttgttt
ggctccagtctttgttgcttcagtgaagaatggaaaatacagagttttacatttaataac
atacctcagttaaaatatggcattgtgcaaaaaaagggtggcccatgtggagttctggct
gcagttcaagcttgtgtcctacaacagcttatttttgcagacagtaacaggaataaagac
actcgttgtcttcagccttcagaagttcacaggaccaaatgcctcaccatggctattgca
gacatactgtggcgtgcgggaggcaatgaaaaagcaattgtggcactgccatcaggaaga
cagcagttcactcccgtaggaaaatacaaggcagatggaatcttggaaactctaatacta
catagtgccacaagatatgaagatctgattgtgtttcttcagcagaatattcgccagttt
gagactggtccctgtgggtgcatccttctgactgtttctgtcatcttatcaagatctatc
aatctggtgcgcaatgatttcgatgtgcttacaaaccgactgattggcagccatggctat
tgtactcaggaattggtgaatttgcttttgactggcaaagccgtgtccaatgttttcaac
aacgtgatagagctggactctggaaatgggaatatcacaattttgaaaggtgtcacaagc
cgcagtgatattggtttgctgtctctcttcgagcactatgatgtttgtcaggttggttgt
tacttgaagaccccgaaatacccaatttggttggtatgcagtgaaagccacttcagtgtg
cttttttgtttggaaaaggatttactaggtgactggaaaacagagcggagatttgatcta
ttggaaaaggatttactaggtgactggacagagcggagatttgatctgtattattatgat
ggcttggccaaccaggaagaagaaatacggttaacggttgacacaactcagatgtgcact
gaagataaagaaaatgatcttactcctccacttgagcattgtattaggacaaagtggcaa
ggagctgttattgactggaatggcacagaaccaatcttgtga
DBGET
integrated database retrieval system
