Charadrius vociferus (killdeer): 104282064
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Entry
104282064 CDS
T08577
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
104282064 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cvf03000
]
104282064 (GLI1)
Transcription factors [BR:
cvf03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
104282064 (GLI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
DUF7565
Motif
Other DBs
NCBI-GeneID:
104282064
NCBI-ProteinID:
XP_009878430
LinkDB
All DBs
Position
Unknown
AA seq
1301 aa
AA seq
DB search
MFNPGSAPAPGSAEHCCLRPPHGPAPGAPGPQGLDFPLCHQSNLMSSHRGYGLVPGTEHP
GSGDGSRFSTPRGAGKLGKKRALSISPLSDSSIDLQTVIRTSPNSLVAFINSRCASASGS
YGHLSISTISPSLGYQSPPGQQKGQGHLYSHTPPPSCSSHEHLSTRPGLLHHAPARGTLK
HCQQLKLEWSLSSPLTVKYPEERSEGDISSPASTGTQDPLLGMLDVREDLEKEDGKPESE
TVYETNCYWDGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLVV
HMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAK
HQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDVVPGRALPTP
GGPPDMKQEKDTNGPSEAHKDDSKLLVPDLALKPQPSPGGMSSCSSDHSPLGSTTNNDSG
VEMAGNAGGSYEDLSTLEDVLPSEPMGTSGLMALHKLENLRIDKLKQMRKPSATKGLNLP
AIPGAGLPGEVPGVSVPPPAASHRRIAELSAAEMGMPLNERRSSATSTISSAYTVSRRSS
LVSPYLTGACLGGEAGAIPGGAGLADGYDPISPDASRRSSDASHCGGLPGVGSLTPAQRY
RLKAKYAAATGGPPPTPLPSMERVGMGGHSSLPGNYLGPAELCCLANGLLRRHSSNDYPG
YAGSVPPHLVPRNGVRRASDPARTVANPHAVPKVHRFKSMGNVSVPGAGRTALQPLGGSD
ANLQRHVFSPRPPSISENVLLESVSIEGPGPGTESGLLEMEQYLNYPEESFTCQGTGVEL
PCEGLYGGAHRTTGSVQLNQGGHGDMEEGFLQSEFSLPQCQMNQHFMSVHAGNRTMPATW
DEPAQGNLEMSSGQPSVSASAAAVSGPHCHHQSTEYPLPSSCGQQPKLVSSWQDSGFSGG
HRLNRLQIKSEQRYPAPAPALAPCQNTKLAGPMQAPALFGQAMSVGPGGYQSEEQAPASY
MGMLSPGGRRAQTPTMQTKEVMVRSYVQAQQALMWGDQLASKGGEAGMGLGGEPGQCQAM
QVPPYLSPKYSGYQAKPDDLQGLAETPHVNAPCFNLEMVPHPPGGPKLPGHQNNLNYAGN
LPQLSHPYEGVEASSWRVLRLPPARPTLEGPGSALLYYPGQGTHLQVGKGGHKLLGQTAA
SCGGPGHYGGSLEGLKGSSYYYPDSGEQVANSLDSLDLENTHLDFTAIVEDPETPAVLPG
SPSPAGGLLLPASGGANMAVGDMSSMLSTLAGESHFLNSLC
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccctggcagcgccccggcccctggctctgctgagcactgctgcctgcgccca
ccgcacggaccagcccccggtgccccagggccacaaggacttgatttccccttatgccat
cagtcaaacctaatgagcagtcaccgtggttatgggttggtgccaggaaccgagcaccca
ggcagtggtgatggctcacggttctcaacgccccgtggtgcaggcaaactgggcaagaag
cgggcactgtccatctcacccctgtcagactctagcattgacctgcagacggtaatccgc
acctcacccaactccctcgttgcgttcatcaactcccgctgcgcctctgccagtggctcc
tatggccacctctccatcagcaccatcagtccatcactggggtaccagagtccaccaggt
cagcagaagggccaaggccacctgtacagccacacaccaccgccatcatgtagctcccac
gaacacctgtccacccgcccagggctcctgcaccatgccccagctcgtgggacccttaaa
cactgccagcagctaaagttggagtggagcctgagcagccctctgactgtaaaataccca
gaggagagatccgagggtgacatctccagtccagcttccacaggcacccaggaccccttg
ctggggatgcttgatgttcgggaagatctggagaaggaagatgggaaacctgagtctgag
actgtgtatgaaaccaattgctactgggatggctgtgccaaggagttcgatacgcaggag
cagctggtgcatcacatcaacaatgagcacatccatggggagaagaaggagtttgtgtgc
cactgggcagcatgttcccgggagcagaggcccttcaaggctcagtacatgttggtggtg
cacatgcgacgtcacacaggcgagaaacctcacaaatgcacgttcgagggctgtaacaaa
gcctactcacgcctggagaacctcaagacgcatctacgctcacacacgggtgaaaaaccc
tacgtctgtgaacacgagggttgcaacaaggccttctccaatgcttctgaccgggccaag
catcaaaaccgcactcactccaatgagaagccttatgtgtgcaagattccaggctgcacc
aagcgctacacagaccccagttccctgcgcaaacacgtgaagacggtgcacggccctgac
gcccatgtcaccaagaagcaccgaggggatgtcgtgccaggtcgtgcactacccacccct
ggtggccccccagacatgaagcaggagaaagacacaaatggccccagtgaggcccataag
gatgacagcaaactcttggtgcctgacttggccttgaagccgcagcccagcccaggtggg
atgtcgtcatgcagcagcgaccactccccacttggcagcaccaccaacaatgacagtggg
gtggagatggcgggcaatgcaggtgggagctacgaggatctgtccacgctggaggacgtg
ctgcccagtgagcccatgggcacctcagggctcatggccctccacaagctagaaaatctt
cgcattgacaaactgaagcagatgaggaagccatcagctaccaagggtctgaatttgccc
gccatccccggagccggcctgcctggggaggtgcctggggtctccgtgccgccaccagct
gcctcgcaccgacgcattgcggagctgtcagcagcagagatgggcatgccgctgaacgag
cgccggagcagtgccaccagtaccataagctcagcctacacagtgagccggcgttcgtcc
ctggtgtccccatacctgactggggcatgtctgggtggtgaggccggggcaatacctggc
ggggcaggcctggcagatggctatgaccccatctctccagatgcatcgcgacgctccagt
gatgccagccactgtggagggctgccaggtgtgggtagccttaccccggcccagcggtac
cgtctcaaggccaaatatgctgcagccacaggtggcccacctccaaccccgctgcccagc
atggagcgggtgggcatgggtggccacagcagcttacctgggaactaccttgggccagct
gaactctgctgccttgcaaatggtctgctgcgaaggcacagttccaatgactaccctggc
tatgcaggtagtgttccccctcacctggtgcctcggaatggtgtgcggcgggccagcgac
ccggctcggactgtggccaaccctcatgctgtgcccaaggtgcatcgttttaagagcatg
ggtaatgtgagcgtgccgggagcgggcagaactgctttacagcccttgggtggttctgat
gccaaccttcagcgccatgtcttctccccacgcccacccagcatcagtgaaaatgtctta
ctggagagtgtgagcatagagggccctggcccgggcacggagtctggcttgctggagatg
gaacagtacttgaactaccctgaggaaagcttcacatgccaggggacaggtgtggagctc
ccgtgtgaaggcctctatggcggcgctcaccggaccacagggagtgtgcagctgaaccaa
ggagggcacggggacatggaggaggggttccttcagtctgagttctccctccctcagtgc
cagatgaaccagcacttcatgagtgtgcatgctggcaacaggaccatgccagctacttgg
gatgaacccgcccaaggcaatctggagatgagttctggtcagccaagtgtcagtgcctct
gctgctgccgtgtctgggccacactgtcaccaccaaagtactgagtacccactacccagt
tcttgtgggcagcaacccaaacttgtgagctcgtggcaggacagtggattttctgggggg
caccggcttaaccgactgcagatcaaatctgagcagcgttacccagcacctgccccagca
cttgctccctgccagaacaccaagcttgcagggcccatgcaggctcctgcattgtttggc
caagccatgagtgtagggcctggtggttaccagtctgaggaacaggcacctgccagttac
atgggcatgttgagcccgggtggtagaagagcccagacacccactatgcagaccaaagaa
gtgatggtccgtagctatgtgcaggcccagcaggctctgatgtggggagaccaactagcc
tccaaaggaggagaggctggcatggggctgggcggtgaacctgggcagtgccaagccatg
caagtgccaccatacctcagccccaagtactctggttaccaagccaaaccagatgacctg
cagggtctggcagagaccccacatgtaaatgccccatgcttcaatctggagatggtgcca
cacccgcctggtggccctaaactgcctggccaccaaaacaatctgaactatgcaggcaac
ctgcctcagctcagtcatccctatgagggagtggaagccagctcctggcgtgtacttcgc
ttgccccctgcccgccccacacttgaggggcctggtagtgccctgctgtactacccaggc
cagggcacacatctgcaggtgggcaaaggtgggcacaagctgctgggccaaacggcagca
agctgtgggggtcctgggcattatggtgggagcttggaaggactcaaaggcagctcatac
tactacccggattcgggggagcaggtggccaacagcctggactccctggacctggagaac
acacatcttgactttactgcgattgtggaagacccagagacacctgcagtgctgcctggg
tccccgagccctgctggtggcctcctgcttcctgcctctggcggtgccaatatggccgtg
ggtgacatgagctccatgttgagcactctggcaggggagagccatttcctcaactccctg
tgctaa
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