Charadrius vociferus (killdeer): 104282067
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Entry
104282067 CDS
T08577
Symbol
SHMT2
Name
(RefSeq) LOW QUALITY PROTEIN: serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf00260
Glycine, serine and threonine metabolism
cvf00630
Glyoxylate and dicarboxylate metabolism
cvf00670
One carbon pool by folate
cvf01100
Metabolic pathways
cvf01200
Carbon metabolism
cvf01230
Biosynthesis of amino acids
cvf01240
Biosynthesis of cofactors
cvf04981
Folate transport and metabolism
Module
cvf_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
104282067 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
104282067 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
104282067 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
104282067 (SHMT2)
Enzymes [BR:
cvf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
104282067 (SHMT2)
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Paralog
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Motif
Pfam:
SHMT
Neurexophilin
Motif
Other DBs
NCBI-GeneID:
104282067
NCBI-ProteinID:
XP_009878434
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All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
ETWVMLEKQPGLLTVCAGGHITKTLGYLELGTSNLLKDVPYGTLKPPVLDPRRLIPAEPP
RGAGAPLGAARSPWDWQKNQTAGELPSPRTRRKPSLKSGRTKKIFGWGDFYFNIKTLKFS
LLVTGKIVDHINGTFSLIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIE
LLCEQRALEAFDLDPACWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGY
MSDIRRISATSIFFESMPYKLDPATGLIDYDQLEVTARLFRPRLIIAGTSAYARLIDYAR
MKKVCEEVKAYLLADMAHISGLVAAKAIPSPFEHADLVTSTTHKTLRGARSGLIFYRKGV
RSVDKKTGKETLYDLEDRVNFAVFPSLQGGPHNHAIAAVAVALKQVCARAGGLGLGVAPA
PRXHHLXXXXXXXXXXXXARAERVLELVSITANKNTCPGDKSALTPGGLRLGAPALTSRH
FREEDFQKVVAFIDEGIALALDVKSKTSKLQDFKTFLLQDAETQRRLADLRQRVETFARA
FPMPGFSDH
NT seq
1652 nt
NT seq
+upstream
nt +downstream
nt
cggagacgtgggtgatgctggagaagcagcccgggctgctgacggtgtgtgctgggggcc
acatcaccaagaccctggggtacctggagctgggtacctccaacctcctcaaggatgtcc
cctacggcaccttgaagcccccggtgctcgaccccaggcggctgattccggctgagcctc
cccggggtgcgggggcgcccttgggcgctgcacggagcccctgggactggcagaagaacc
agacggccggggagctgccaagtccccgcacccggcgcaagccctcgctcaagtccggcc
gcaccaagaagatcttcggctggggcgacttctacttcaacatcaagacgctgaagttca
gcctgctggtgacggggaagattgtcgaccacatcaacggcaccttcagcctcatcgcct
ctgagaatttctgcagccgggcggcactggaagccctgggctcctgcctcaacaacaagt
actcagaggggtaccctggcaagaggtactatgggggagctgaggtggtggaccagattg
agctgctgtgtgagcagcgggctctggaggcgtttgacctggatcctgcatgctggggcg
tcaacgttcagccctactcggggtctccagccaactttgcagcctacacagccctactgc
agccccatgaccgcctgatgggactggacctgcctgatggtggccaccttacacatgggt
acatgtcggacatcaggagaatctcggcaacgtctatcttcttcgagtcgatgccctaca
aacttgacccagccacggggctgattgactacgatcagctggaggtgacggcacggctct
ttcgtcctcgcctcatcattgccggcaccagcgcgtacgcccgcctcatcgactatgctc
gcatgaagaaggtgtgcgaggaggtgaaggcgtacctgctggcagacatggcgcacatca
gtgggctggtggcagccaaggccatcccttcgccctttgagcacgcggacctggtcacca
gcaccacacacaagaccctgcgcggggccaggtcaggactgatcttctaccgcaaaggcg
tgcgctcggtggataagaagacaggcaaggagacgctctacgacctggaggacagggtca
actttgctgtcttcccctccctgcaaggggggccccacaaccatgccatcgctgccgtgg
ctgtggccctcaaacaggtctgtgccagggcagggggcttggggctgggggtggccccgg
ccccgcgctgacaccatctnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcgc
gggctgagcgggtgctggagctcgtctccatcactgccaacaagaacacatgcccggggg
acaagagtgcgctcacgccaggggggctgcgcctgggtgcccccgcgctgacttcccgcc
acttccgcgaggaggatttccagaaagttgtggctttcatcgatgagggtatcgcgctgg
ccctggacgtcaagagcaaaaccagtaagctccaggacttcaagaccttcttgctgcagg
atgcagagacgcagcgccgcttggccgacctgcgccagcgtgtggagacctttgctcgtg
ccttccccatgcctggcttcagcgaccactga
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