Charadrius vociferus (killdeer): 104282068
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Entry
104282068 CDS
T08577
Name
(RefSeq) LOW QUALITY PROTEIN: protein LAP2-like
KO
K12796
erbb2-interacting protein
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
104282068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
PDZ_2
PDZ_6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
104282068
NCBI-ProteinID:
XP_009878435
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MAPAYTVHQCLPKPYTSVGLMCQAIESTQSSIPSHPSPPPGLRLGPSVPVPGRSIHCLTL
AVPDQKSPHQDQERLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQ
LSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSNNSL
QQLPETIGSLKKVTTLKIDENQLIYLPDSIGGLLSVEELDCSFNEIETLPSSVGQLSNIR
TFAADHNFLTQLPSEIGNWKHLTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPF
TFTKLQQLTAMWLSDNQSKPLIPLQKEADPDTQKAVLTNYMFPQQPRTEDVMFISDNESF
NPSLWEEQRKQRAQVAFECDEDKDEREAPPREGNLKRYPTPYPDELKNMVKTVQTIVHRL
KDEESTEDIAKESKQEGQTVSVKDVGVNNSEIVSIKNKADERKQYSXXXXXXXIEPEAEH
STANPQMTALVKTSQSTKTIVNHEDTLEQESEELSSDEEMKMAEMRPPLIETSINQPKVV
ALSNNRKDDSKDADSLSDEATHNSNQNNSNCSSPSRMSDSVSLNTDSSQDISLFSPNKEI
HAAVLSKIRQEDENLNNLLQNGGELSITVEEKINVQEKVTNLSEYELSIEERLGLIKCVD
LSTPTEESHKSDQINMNINKMFSEEVVPVPVERLQTQEIVSVKGFLNNNMKEESEYMENG
NKYPINKVNGHPEEAVQSPSKDKLTRSTTVDDDSSAELSVSRSTEDLSPQRSGPVMKSHS
ITGMDTGLKIYDIVSENGSQQPNSAVKSASGSADGKNIVRSKSATLLYDQPLQVFPGPLL
SSDLVSSTKTVFKFDSNHNSEGDNVVRGSVTSGAQMFCTPQYNIRYSSSATMKDTLWPQK
QNIQVEQGNLPPSHLLRSDSTEIHSYVKHSANMNLSNHNNIQASAVYNTQQQMAGRHVDV
WAIPPNAASTRLLPGATRHTLQRQSSVSSTACINVGDTGPSRWAQVPEGDYLTYRDLHLV
GRAPPVMSGQQRPLSARTYSIDGPNVPRPQSARPSVNEIPERTMSVSDFNYSWTSPSKRS
NPRVNSDHSLLDPPGKSKVPHDWREQVLRHIEAKKLEKSMLSRSFNSNYAAVSSFHYGSS
RDLHGSQGSVALSVADRRGSGVHIDRYPQTSTPGDQCHDEVFISGQQNYSSVSLKDIPPD
SMKKIAVQIPLTNGQMCQPQRPQANYSQVHHLPPQSSVARHPSREQLIDYPILKVAHQPP
YTQSQCSPRQSHELAKQEIRVRIDKDPELGFSISGGVGGRGNPFRPEDDGIFVTRVQTEG
PASKLLQPGDKIIQANGYSFINIDHGQAVSLLKTFQNAVELIIIREVSS
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagcatacactgtgcaccagtgtctaccaaagccttatacttctgtgggtctg
atgtgccaggccattgaatccacacagtccagtatacccagtcatccctctcctcctcct
ggcctaaggctgggaccctctgttcctgttcctggtcggagtattcactgtctgaccctt
gcagtgccagaccagaagtcccctcaccaggatcaagagagattaactaaactccagata
ttggaacttagagaaaaccagttaaaaatattgccaaaaaccatgtccagactgactcag
ctggagagactggacttaggaagtaatgaattcacagaagtgcctgaagtgcttgaacaa
ctgagtgggttaaaggaattttggatggatggtaatagactaacacttattccagggttc
ataggaactttgaaacaactgacctacttggatgtttctaaaaacaacattgaagtagtt
gaagaaggtatttcaggttgtgaaagcctacaagacctactgttatccaataattcactt
cagcaactgccagagactatcggttccctgaagaaggtaacaacacttaaaattgatgaa
aaccaattaatttatttgccagactccataggagggttactatcagtagaagaactggac
tgtagtttcaatgagattgaaacgttaccttcgtctgttgggcaactctctaacataagg
acatttgctgcagatcataactttttaacacagctgccatcagagattggaaactggaag
catttaacagtgttgtttctgcattctaataagcttgaatttctccctgaagaaatgggt
gatatgcagaaattaaaagtgatcaatctgagtgacaatagactgaagaatttaccattt
acctttacaaaactgcaacaactcactgctatgtggctatcagacaatcagtctaaacca
cttatccctcttcaaaaagaagctgaccctgacacacagaaagcagtgcttactaattac
atgttcccccagcaaccaaggactgaggatgttatgttcatatctgataatgaaagtttc
aatccatctttgtgggaggaacagaggaaacagcgtgctcaggtggcatttgagtgtgat
gaagacaaagatgagagagaggcaccgcctcgggaaggcaacctgaagagatatccaact
ccgtatcctgatgaactaaagaatatggttaaaacggtccagacaattgtacacaggcta
aaggatgaagaatctaccgaagatattgccaaggaatcaaaacaagaaggccagacagtt
tctgtaaaagatgtgggggtaaacaattcagaaatagtttcaataaagaacaaagcagat
gaaagaaagcaatattcannnnnnnnnnnnnnnnnnnctattgaaccagaagccgagcac
agcactgcaaatccacagatgactgcacttgttaaaacctcgcaaagcacaaaaacaatt
gtcaaccatgaagacacgctcgagcaggaatcggaagaactctcctctgatgaagagatg
aaaatggcagaaatgcgaccaccactgatagaaacctccataaatcaaccaaaagtggta
gctcttagcaataacagaaaagatgattcaaaagatgctgattccttatcagatgaagct
acccacaatagcaatcaaaataacagcaactgttcctctccttctcgaatgtcagattct
gtttccttaaatactgatagtagccaagatatttctctcttttctccaaacaaagaaata
catgctgctgttttatccaagatcaggcaagaagatgaaaatttgaataatcttttgcaa
aatggaggtgaattgagcattacagtagaagaaaaaataaatgtgcaagagaaggttaca
aatttgtctgaatacgagttaagcatagaagaaagattaggcctgataaaatgtgttgat
ctaagcactcctacagaggagtctcacaaatcagaccaaataaacatgaatatcaataaa
atgtttagtgaagaggtggtgccagttcctgtagaaaggttacaaacacaggaaatagtt
tcagtaaagggctttttgaataacaatatgaaagaagaaagcgagtacatggaaaatgga
aataaatatcctataaataaagtaaatggacatcctgaggaagcagtacaatctcccagt
aaagacaaactaacacgaagcaccacagttgatgatgattcttctgctgagctgtctgtt
tcaaggagtactgaagacttgtccccacagagaagtggtcctgtgatgaaatctcacagc
atcaccggtatggacactggtctgaaaatctacgatattgtcagtgagaatggatctcaa
cagccaaactcagcggtaaaatcagcatctggtagtgcagatggaaaaaacatagtccga
agtaaatctgctactcttctgtatgatcagcctttgcaggtttttcctgggccgttgttg
tcatctgatttagtatcttctacaaaaactgtgttcaagtttgactcaaatcacaattct
gaaggtgataatgtagtgagaggatcagtgacaagtggtgcacagatgttctgcactccc
caatataatattcgatacagcagcagtgcaacaatgaaagacaccttgtggccccagaaa
caaaacatccaagtagaacaaggcaatttacctccttcacatctgcttaggtctgatagc
acagaaatccacagctatgtaaagcattctgccaatatgaatttatccaatcataacaat
atccaagccagcgctgtgtataacactcaacaacagatggctgggaggcatgtagatgtg
tgggctattccaccaaatgctgcttccaccagactgcttccgggagcaaccagacacact
cttcaaaggcagagcagtgtatcctctacagcttgtataaatgttggggatactggacct
tcaaggtgggcccaggttcctgaaggggactatttaacatacagagacttgcatttagtg
ggaagagctccaccagtaatgtctgggcaacagagacctctttctgctaggacatatagc
attgatggtccaaatgtaccccgaccacagagtgctcggccatcggtgaatgaaatacca
gaaagaactatgtcagttagtgactttaattactcatggactagcccttcaaagagatca
aacccaagggttaactctgaccactctttattagaccctccaggaaaaagtaaagtccct
catgactggagggaacaggtgctgcgacatattgaggctaaaaagctagaaaagagcatg
ctgtctaggtcctttaattccaattatgctgcagttagcagctttcactatggcagctct
agggatctgcatggcagccagggtagtgttgccttgagtgttgcagacagaagaggttct
ggtgtgcacattgatcgatatccccagacttctactccaggagaccaatgccatgatgag
gtattcatttcaggacagcagaattactcatcagttagtctcaaagatattcctccagac
agcatgaagaaaatagctgtgcagatacctttgacaaatggacaaatgtgccagcctcaa
agacctcaggcaaactacagccaagttcatcatctccctcctcaatcatcagtagcaaga
catccatctagagaacaattaattgattatccgatcttgaaagttgcccaccaacctccc
tatacccagtctcagtgttcccccagacaaagccatgaactggcaaagcaagagattcga
gtgagaattgacaaggatccagaacttggatttagtatatcaggaggagttggtggtaga
gggaatccattcagacctgaagatgatggtatatttgtaaccagagtgcaaacagaagga
ccggcatctaagttgttgcagcctggagataaaataattcaggctaatggatacagcttc
atcaatattgatcatggacaagcagtatctttgctaaagacttttcagaatgcagtggaa
ctcatcattatacgagaagtttcttcataa
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