Charadrius vociferus (killdeer): 104282140
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Entry
104282140 CDS
T08577
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104282140 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cvf02000
]
104282140 (SLC6A4)
Transporters [BR:
cvf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104282140 (SLC6A4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
104282140
NCBI-ProteinID:
XP_009878519
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATRNETEPLTTKKDVSDCNEGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNGYSGVPSSVPCNGMGEVEDAQCTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTAELPWTSC
TNAWNTGNCTNYFSKDNVSWSLHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKL
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLIIVCFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRVCWVAVSPIFLLFVTCSFLSNP
PELRLFDYTYPYWTTVVGYCIGTSSIICIPIYMVYRLIITPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagaaatgagaccgagccactgactaccaagaaagatgtctca
gactgtaacgaaggagaagactgtaaagagaacggacttctggtcaggaaccctaaatct
gccctacggctagtggaggatggcaataaagtccatcccagccagggagataaaggggag
gcagctcagatctcaaacggttattcaggggttccgagctctgttccctgcaatggaatg
ggagaggtggaagatgcccagtgcaccgcccccgcagccacaaccaccactacaaccacc
acttctaccacctgcggagcagaaggccagcagcagctgatggagctggaagatagagag
acctggagtaaaaaaattgactttctcctctctgtcattggatatgcagtggatctgggc
aatgtgtggagatttccttatatatgctatcaaaacggaggaggagcattcctcattcct
tacacaattatggccatctttggagggattcctctcttctatatggaactagcactagga
cagtaccacaggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaagga
attggctttgccatctgtataatagatctttacgtagcctcctactacaacaccattatg
gcttgggccttttactacctcgtatcctccttcacggcggagctgccgtggaccagctgc
acaaacgcttggaacacaggcaactgcactaactacttcagcaaggacaacgtcagctgg
tccctgcactccatctctcctgcagaagaattttatacccgccaagttctacaggtgcac
aggtccaatgggctggatgacctggggggcattagctggcaattgaccctctgtttattg
ttaatcttcaccattgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtatgggtgactgccacattcccttacatcatactcttcatcctgctagtgagaggtgca
actttgcctggcgcctggagaggtgtcctctactacttgaagcctgactggcagaaactc
ctggccactgaggtttgggtggatgcagcagctcagatttttttctccctcggtccaggt
tttggggtcctattggcttatgccagctacaacaaattccacaacaactgctaccaagat
gctctggttaccagtactgtgaactgtctgactagttttgtgtctggattcgtcattttc
acggtgctgggatacatggctgagatgaggaatgaagatgtatccgaggttgccaaagat
acaggacccagccttctcttcatcacgtatgccgaggccattgcaaacatgcctgcttcc
actttctttgccatcatctttttcctgatgttgctcacgctgggattagacagcacgttt
gcaggactggagggagtgattactggagtactggatgaattcccccatgtctggagcaaa
cgcagggaattgtttgtccttggtctgatcatcgtttgctttttggggtcattagcgacc
ctgacatttggaggtgcgtatgtggtaaagctgtttgaagaatacgccaccggtccagcc
gtcctaactgtcgtgtttctggaagcagttgctgtggcctggttctacggcatcacccag
ttttgcaacgacgtgaaggaaatgctaggctttaccccaggctggtactggcgagtttgc
tgggtagcagttagtcccatcttccttctgttcgtcacttgcagctttctgtccaaccct
cctgagctacggctttttgattatacttatccctactggaccacagtagtgggttattgc
ataggaacctcttctatcatctgtattccaatctacatggtttatcggttgattatcact
ccaggaacacttaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
ccttttggagacatccgcatgaacgcagtataa
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