Charadrius vociferus (killdeer): 104282342
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Entry
104282342 CDS
T08577
Symbol
SPAST
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104282342 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104282342 (SPAST)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
104282342 (SPAST)
Membrane trafficking [BR:
cvf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
104282342 (SPAST)
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
104282342 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
AAA_14
AAA_16
Mg_chelatase
IstB_IS21
AAA_24
DUF815
NPHP3_N
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
104282342
NCBI-ProteinID:
XP_009878734
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MFMVVFAVIWIQEFVGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMMTN
LAMAKDRLQLLEKLQAVLQISKPQTEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHMSN
SLPRSKTVAKTGSTGLSGHHRTPSYSGISSSSVSRPAPNPAASTHKAAPKNSRTNKPSTP
TTAPRKKKDLKIFRNVDSNLANLILNEIVDSGPAVKFDDIAGQELAKQALQEIVILPSLR
PELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVR
ALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMG
ATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGY
SGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIRLSDFTESLKKIKRSLSPQTLEAY
IRWNKDFGDTTV
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggttgtatttgctgtaatatggattcaggaatttgttggacaaaaggaacaa
gctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtcttagta
attggtcaaggtgatcagtgtgaacgggctcgacgtcttcaatctaaaatgatgacaaat
ttggcaatggccaaggatcgcttgcagcttttagagaagctgcaggcagttttgcaaatt
tccaagccgcaaacggaggtctataatgacagtactaacctggcatgccgcaatggacat
ctccagtcagaaagtggagcggttccaaaaaagaaggatcccttaacacacatgagtaat
tcccttcctcgttcaaaaactgttgcaaaaactggatccacaggcctttcaggtcaccat
agaactcctagctacagtgggatatcatcatcttctgtgtctagaccagcacctaatcct
gcagcttcaacccacaaggcggctcctaaaaatagcagaacaaataagccttctactcct
accactgctcctcgaaaaaagaaagatttgaagatatttagaaatgtggacagtaatctt
gctaatcttatcctgaatgaaattgttgatagtggtccagctgtcaaatttgatgatatc
gcagggcaggaactggctaaacaagctttgcaagaaattgttatccttccttcgcttaga
cctgagttatttacaggacttagagctcctgcacgtggattattgctgtttggcccaccg
ggaaatgggaagacaatgttggccaaagcagttgctgcagaatcaaatgctactttcttt
aatataagtgcagcaagtctaacttcaaaatatgtgggtgaaggggagaaactggtgcgt
gctctatttgcagtagccagagaacttcagccttctataatttttattgatgaagttgat
agcctattgtgtgaaagacgagaaggtgaacatgatgctagtaggcgtctaaaaacagaa
tttttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatggga
gcaacaaacaggccacaggagcttgatgatgctgttcttagacgattcaccaaacgggta
tatgtgtctttaccaaatgaggaaacaagattgattttgctaaaaaatcttctaagcaaa
caaggaagtccattgacccaaaaagagttggcacaactagctagaatgacagatggatac
tctggaagtgatttaacagcattagcaaaggatgcagcactgggccctattcgagaatta
aaaccagaacaggtgaagaacatgtctgcaagtgagatgagaaatatcagactgtcagat
ttcactgaatctttgaagaagataaagcgtagtttgagccctcagaccctggaagcatat
attcgctggaacaaggactttggagataccacggtgtga
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