KEGG   Charadrius vociferus (killdeer): 104282564
Entry
104282564         CDS       T08577                                 
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104282564 (APTX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cvf03400]
    104282564 (APTX)
Enzymes [BR:cvf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     104282564 (APTX)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     104282564 (APTX)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     104282564 (APTX)
DNA repair and recombination proteins [BR:cvf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104282564 (APTX)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     104282564 (APTX)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA FtsK_SpoIIIE_N
Other DBs
NCBI-GeneID: 104282564
NCBI-ProteinID: XP_009878972
LinkDB
Position
Unknown
AA seq 372 aa
MKLFPSLALSVFSHFCCFGVTVMRVCWLVGKEKCNQRMKLPHLEAVVIGRGPETGITDRK
CSRQQVQLKADCNKGYVTVKQIGVNPTSVDLVNIGKDEEVKMKPGQVLHIVNKLYPFMVQ
FAEESGKTVKEAEEKIQTDKVLREDSCEKDDTDPVPSKTMKMEVVDTQGSSAHSKLSTTS
VSPHEGTSSKKEHLGHWSQGLKSSMQDPKMQVYKDEKTVVIKDKYPKARYHWLILPWDPI
SSLKSVTRDHLELLEHMHAVGQKMVEQCPARDSLEFRLGYHAIPSMSQLHLHVISQDFDS
PALKTKKHWNSFTTDYFLNSEDVIEMIRSKGKVMVKDHVSELLTLPLRCHRCKQQLSTIP
QLKEHLRKHWPK
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgaagctattcccctctcttgccctgtctgtcttcagccacttttgttgttttggtgtc
acagtgatgcgtgtgtgctggctcgtggggaaagagaaatgcaatcagcggatgaaactg
ccacacttggaagcagttgtaattgggcgtggcccggagactgggataacggataggaag
tgttcacggcagcaagttcagttaaaagcagactgtaacaaggggtatgtcacagttaag
cagataggagtcaacccaactagtgttgatctcgtgaatattggcaaagatgaagaggtg
aaaatgaagccaggccaagttctgcatattgtgaataaactttaccccttcatggtgcaa
tttgctgaagagtcagggaaaactgttaaagaagcagaagagaaaatacaaaccgacaag
gtgctacgtgaggactcctgtgagaaggatgatacagatccagtgccaagtaaaacaatg
aagatggaggtggtggatacacaaggtagttctgcacattccaagctaagcactaccagt
gtgtctccacatgaaggaacttcgagcaaaaaggaacatttaggacactggagtcagggt
ctaaagagctccatgcaagatccaaaaatgcaggtttacaaagatgaaaagactgtagtc
atcaaggataaatatcctaaagcacgttaccactggcttatcttaccatgggaccccatt
tccagcctgaagtcagtcaccagggaccatcttgaactcctggaacatatgcacgcagtg
gggcaaaaaatggtcgaacagtgccctgccagagacagtttggagttcagacttggttac
catgctatccccagtatgagtcagctacacttgcatgtaatcagccaggattttgattct
ccggccctgaaaaccaaaaagcactggaactcttttactacagactacttcttaaactct
gaagatgtgatagagatgataagaagcaagggaaaagtgatggtgaaggatcatgtctct
gaacttctcacattgcccctcagatgccatcgttgcaaacaacagctgtccactatccca
cagctaaaggaacatctcaggaaacactggccaaaatga

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