Charadrius vociferus (killdeer): 104282573
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Entry
104282573 CDS
T08577
Symbol
ZC3H12B
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104282573 (ZC3H12B)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
104282573 (ZC3H12B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
104282573
NCBI-ProteinID:
XP_009878978
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MTAWSMVGKLKMEKRHSREDRNVEQDAGECSAESEEWTSSESEPEQPYFRSTCSNIQWRE
KEVPTKPHRPLCRSPCLDRPSFSQSSITQDLKLDECKTNLDKEYQAKMDFALKLGYAGDQ
IQAVLNKLGADALINDVLAELVRLGNKSESEGQSSASSTASTLVPRGPCPKEIASPELSL
EDEVVDNSDNLRPIVIDGSNVAMSHGNKEGFSCRGIQLAVDWFLEKGHKDITVFVPAWRK
EQSRPDAPITDQEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAFDSDGIIVSND
NYRDLQNEKPEWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVIPEHKKQ
PCPYGKKCTYGHKCKYYHPERANQPQRSVADELRISAKLSAVKTMSEGALAKCGTGPSSS
KGEISSEVKRIAPKRQSDPSIRSVAVEPEEKLSVARKSEASSVPSLVSALSVPTLPPPKS
HAAGALNTRSASSPVPGSSQFMHQKSSLEHMSSVQYPPILVTNSHGTSVSYTDQYPKYES
LGDHGYYSLLSDFSNLSISSIRNTDYYGADMDQGMYSRNSSPCPDNCLSHTSNDSYSSYN
DLYLGVADASPEDNVKIHRLPSQNRVQPFSHGYHEALNRVQSYGTEEPKQSLRKQSVSHL
GLHAQHPVVGARSSCPGEYPVPQNVHPSTAQPSRALVMTRMDSISDSRLYESNPTRQRRP
PLCREQHASWDPLPCASDSYTYHSYPLSNNLMQPCYEPVMVRSMPEKMEQLWRNPWIGIC
GEPREPHIIPEHQYQTYKNLCNIFPPSIVLSVMEKNPHMTDAQQLAAMIVAKLRTGR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggtctatggtagggaagctgaaaatggagaagaggcactccagagaagac
agaaatgtggaacaagatgctggggaatgcagtgctgaatctgaggaatggacgagctca
gaaagtgaacctgagcaaccgtacttcagaagcacctgtagcaatattcagtggagagaa
aaagaggttcccactaaaccacatcggccactctgtcgttccccttgtttggatcgccca
agtttttcacagagcagtatcacacaagacttgaagctagacgaatgcaaaacaaatttg
gacaaggaataccaagctaaaatggattttgctttaaagcttgggtatgcaggagatcag
atccaggctgtactgaataaattgggagcagatgcactcatcaatgatgttctggcagag
cttgtgagacttggcaacaaaagtgaatcagagggacaaagcagtgccagcagtaccgct
agtactctggtgccaagaggcccttgcccaaaggaaatagcaagccctgaattgtcactt
gaagatgaagttgtggataacagtgataacttgaggccaattgtcattgatggaagcaat
gtggctatgagccatgggaataaagaaggattttcctgtcggggaattcaactagctgtt
gattggtttctggaaaaaggacataaagatatcactgtgtttgtacctgcatggagaaaa
gaacagtctcgacctgatgcaccgattacagatcaagaaatcttacgtaaattggagaaa
gaaaaaattcttgttttcaccccatctcgaagagttcagggaagaagagtagtttgctat
gatgatcgattcatagtaaaacttgcttttgactcagatggcatcattgtatcaaatgac
aactatcgggatcttcaaaatgaaaaaccagaatggaagaagttcatagaggagcggctg
ctaatgtattcttttgtgaatgacaaatttatgcctcctgatgatcctttaggacgccat
ggtccaagccttgaaaatttcttaaggaaaaggccggttattcctgaacataagaaacaa
ccgtgtccttatggtaaaaagtgcacctatgggcacaaatgtaaatattaccacccagaa
cgggcaaaccagcctcaaaggtcagtagcggatgagcttcgaataagtgccaaattatct
gctgtgaaaactatgagtgagggagccttggccaaatgtggcacagggccatccagctcc
aaaggagagatcagttctgaagtgaaacgcattgccccaaaacgtcagtcagatccaagc
attagatcagtagctgtggagcctgaggaaaagttatcagtagcccggaagtccgaggcc
agctctgtcccgtctctggtttctgcattaagtgtaccaacgctccctccaccaaaaagc
catgcagctggtgcattaaatactcgttctgcaagcagtccggtgccaggttcctcacag
ttcatgcatcagaaatcctcactggaacatatgtccagtgtgcaatatcctcctatacta
gtcaccaatagccatggcacctcagttagctataccgaccagtatcccaaatatgaatcg
ctgggggaccatggctattactccttactcagtgatttctccaacttgagcataagtagt
atccgtaacacagattattacggggcggatatggaccaggggatgtattctagaaactca
agcccctgtcctgacaattgcttaagccatacgagtaatgattcttattcctcttacaat
gacttgtatctgggtgtagcagatgccagtccagaagacaatgtgaagatccacagactg
ccatcgcaaaatcgtgttcagcctttttcccatggttaccatgaagccttaaatagagtt
cagagttacggaactgaagagcctaagcaatcccttcgcaaacagtcagtttcccactta
ggcctacatgcccagcatccagttgttggagcacggtccagttgtccaggagaataccct
gtgcctcaaaatgttcatccatcaactgcacaaccaagccgtgccttggtcatgacaaga
atggacagtatttctgactcacggctttatgaaagtaaccctacaaggcagagaagacca
cctctttgtcgcgagcagcatgctagctgggatccgttaccgtgtgcgtcagactcctac
acttaccactcgtatccactgagtaacaacctcatgcagccatgttacgaaccggtaatg
gtaagaagcatgcctgagaagatggagcaactctggaggaatccctggattgggatatgt
ggtgagccacgggaaccacatatcatcccagaacatcagtatcaaacatacaagaacctc
tgcaatattttccctccgagcattgtcctttctgtgatggaaaagaatccccacatgaca
gatgcacaacagctggcagctatgattgttgccaaattaagaacagggcgttaa
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