Charadrius vociferus (killdeer): 104282599
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Entry
104282599 CDS
T08577
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03013
Nucleocytoplasmic transport
cvf03015
mRNA surveillance pathway
cvf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104282599
09122 Translation
03013 Nucleocytoplasmic transport
104282599
03015 mRNA surveillance pathway
104282599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104282599
03041 Spliceosome [BR:
cvf03041
]
104282599
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104282599
Spliceosome [BR:
cvf03041
]
Common components
Common spliceosomal components
Cap binding complex
104282599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
Importin_rep_6
DUF7197
Motif
Other DBs
NCBI-GeneID:
104282599
NCBI-ProteinID:
XP_009879006
UniProt:
A0A0A0A8E0
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
GPVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAEL
FQLPSPPHIEVMYTALLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCIDRFINWFSH
HLSNFQFRWSWEDWSDCLTQDLEKPKSKFVREVLEKCMRLSYHQRIIDIVPPSFSVLSPA
NPVCIYKYGDESNRSLPGYTVALCLTIAIKSKASNDEIFNILKDVPNPNKDDNDDEGLTF
NPLKIEVFVQTLLHLAAKSFSHSFSALAKFHKVFKVLAEGDEGKLHVLRVVYEVWKNHPQ
MIAVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYVWEILHSTIRKMNKHVLKIHKEL
EETKARLARQHKRRESDEDDDDNDRSSDREDGPLEEQIERLQERVESAQSEQKNLFLVIF
QRFIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAEL
DHHILTVFQQFCALQA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
ggccctgtcatgcctggcagtcattctgttgaaagatttgtaatagaagaaaaccttcac
tgcatcatcaaatcccactggaaagagagaaagacttgtgctgcgcagttgttgagctat
ccaggaaataataagatccccttgaactaccatatagtagaggtaatatttgcagaattg
tttcagcttccatctccaccacatattgaggttatgtacacagcacttctcattgaactg
tgcaaactccagcctggctctttaccacaagttcttgcacaagccacagaaatgctttac
atgcgcttggatacaatgaatactacatgtatagacaggtttattaactggttttcccac
cacctgagtaacttccagttccgttggagctgggaggattggtcagactgtcttactcag
gaccttgagaagcccaaatccaaatttgtgagagaggttttggaaaaatgcatgaggctt
tcctaccatcagcgaataatagacattgttcctccaagcttttctgtcctcagtcctgca
aacccagtgtgtatttacaaatatggagatgaaagcaacaggtctcttcctgggtatact
gtagcactctgtttaacgattgcaattaaaagtaaggccagtaatgatgaaatcttcaac
attttaaaagatgtgcctaatccaaataaggatgacaacgatgatgaaggactcaccttc
aatcctttgaaaatagaagtttttgtacagactctgctccatctagctgcgaagtctttc
agccattccttcagtgctctggctaagtttcacaaagtcttcaaagtacttgctgaaggt
gatgaggggaaactccatgtcctgagagttgtatatgaggtttggaagaatcatccgcag
atgattgctgttcttgtggataagatgattcgaacacagattgttgattgtgctgcagta
gcaaactggatcttctcttcagaacttgcacatgattttactaggttctatgtctgggaa
atcttacattccacaattcgtaaaatgaacaagcatgtactgaagattcacaaagaactg
gaggagactaaggcgagattggcaagacagcacaaaagacgagaaagtgatgaagatgat
gacgacaatgaccgaagtagtgatagggaagatggacctctagaagagcaaatagaacgc
ttgcaggagagagtagaatcagcccagagtgaacagaaaaatctcttccttgttatattc
cagcgtttcattatgttgttaactgaacacttagtgcgctgtgaaactggtgggattgat
gtatttacaccttggtacaaaagctgtatagagaggttgcagcaaatcttcctacagcat
caccagataattcagcagtacatggtgaccctggagaacctcctgtttacagctgaactg
gaccatcacatactgactgtatttcagcaattttgtgctctgcaggcctga
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