Charadrius vociferus (killdeer): 104282716
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Entry
104282716 CDS
T08577
Name
(RefSeq) caltractin-like
KO
K10840
centrin-2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
104282716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104282716
03036 Chromosome and associated proteins [BR:
cvf03036
]
104282716
03400 DNA repair and recombination proteins [BR:
cvf03400
]
104282716
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
104282716
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
104282716
Centrosome duplication proteins
Centriole replication proteins
104282716
DNA repair and recombination proteins [BR:
cvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
104282716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_9
EF-hand_5
AIF-1
EF-hand_11
EH
Dockerin_1
SUB1_ProdP9
NAT
Motif
Other DBs
NCBI-GeneID:
104282716
NCBI-ProteinID:
XP_009879135
LinkDB
All DBs
Position
Unknown
AA seq
179 aa
AA seq
DB search
MRGVVAGGMASSSGGGAGGGRSPREEPAPAFPLSEEQRRELREAFELFDGDGSGLMYVSG
LKVTVRALGCELGKEDMKRIVSEFSEEGSGKLNFKSFLQVMTQKMAEPCLEREILKAFKV
FDCDGTGKISLENLKVVAGQVREDITDEELQEMIDEADVDGDGEVDKKEFLRILTLTDS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcgtggttgcgggtgggatggcttccagcagcgggggaggcgccggcgggggc
agatccccgagggaggaaccggctcccgcgttcccgctcagcgaagagcagaggcgagag
ctgcgagaggccttcgagctgttcgatggcgacggctcgggcctgatgtatgtcagcggc
ttgaaggtaactgtaagggctctgggctgtgaactggggaaagaagatatgaagagaatc
gtctctgaattcagtgaagaagggtcagggaagctaaactttaagtcatttctgcaggtg
atgactcagaaaatggcggagccatgtctggaaagggagatcctgaaagctttcaaggtg
tttgattgtgatggcactggcaagatctccttggagaatctcaaagtggtggctgggcag
gttagggaagacatcacggatgaggagctgcaggagatgattgatgaagcagacgtggat
ggagatggggaagtggacaaaaaggagttcctacggattctgacactgaccgactcctaa
DBGET
integrated database retrieval system