KEGG   Charadrius vociferus (killdeer): 104282716
Entry
104282716         CDS       T08577                                 
Name
(RefSeq) caltractin-like
  KO
K10840  centrin-2
Organism
cvf  Charadrius vociferus (killdeer)
Pathway
cvf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cvf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    104282716
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cvf03019]
    104282716
   03036 Chromosome and associated proteins [BR:cvf03036]
    104282716
   03400 DNA repair and recombination proteins [BR:cvf03400]
    104282716
Messenger RNA biogenesis [BR:cvf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     104282716
Chromosome and associated proteins [BR:cvf03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    104282716
   Centrosome duplication proteins
    Centriole replication proteins
     104282716
DNA repair and recombination proteins [BR:cvf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      104282716
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 EF-hand_5 AIF-1 EF-hand_11 EH Dockerin_1 SUB1_ProdP9 NAT
Other DBs
NCBI-GeneID: 104282716
NCBI-ProteinID: XP_009879135
LinkDB
Position
Unknown
AA seq 179 aa
MRGVVAGGMASSSGGGAGGGRSPREEPAPAFPLSEEQRRELREAFELFDGDGSGLMYVSG
LKVTVRALGCELGKEDMKRIVSEFSEEGSGKLNFKSFLQVMTQKMAEPCLEREILKAFKV
FDCDGTGKISLENLKVVAGQVREDITDEELQEMIDEADVDGDGEVDKKEFLRILTLTDS
NT seq 540 nt   +upstreamnt  +downstreamnt
atgagaggcgtggttgcgggtgggatggcttccagcagcgggggaggcgccggcgggggc
agatccccgagggaggaaccggctcccgcgttcccgctcagcgaagagcagaggcgagag
ctgcgagaggccttcgagctgttcgatggcgacggctcgggcctgatgtatgtcagcggc
ttgaaggtaactgtaagggctctgggctgtgaactggggaaagaagatatgaagagaatc
gtctctgaattcagtgaagaagggtcagggaagctaaactttaagtcatttctgcaggtg
atgactcagaaaatggcggagccatgtctggaaagggagatcctgaaagctttcaaggtg
tttgattgtgatggcactggcaagatctccttggagaatctcaaagtggtggctgggcag
gttagggaagacatcacggatgaggagctgcaggagatgattgatgaagcagacgtggat
ggagatggggaagtggacaaaaaggagttcctacggattctgacactgaccgactcctaa

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