Charadrius vociferus (killdeer): 104282736
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Entry
104282736 CDS
T08577
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cvf04121
]
104282736 (PDZRN4)
Enzymes [BR:
cvf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104282736 (PDZRN4)
Ubiquitin system [BR:
cvf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104282736 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
104282736
NCBI-ProteinID:
XP_009879156
LinkDB
All DBs
Position
Unknown
AA seq
777 aa
AA seq
DB search
MGCNLCTFQKREEHYKLLYEVSQVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPISK
AHGSSQDVRLVDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFY
EGNEYLSSLPADADRAEDFEYEEVELCRVSSQEKLGLTVCYRTDDEEDTGIYVSEVDPNS
IAARDGRIREGDRILQINGQDVQNREEAVALLSSEECKKIVLLVARPEMQLEEGWLDDER
NEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTD
ESLRNDESSEQENAPEEQNSATLQSKRELGHSQDTLGSVELQCNESFVSGEYIESDFIGN
PEEECERFRQLLELKCKIRNHGEYDLYYSSSTIECNRREQDGVEHELQLLNEELRNIELE
CQNIMQAHRLQKVRDQYGDIWALHDEGFRNYNTSIDVQRGKLDDIMEHPEKSDKDSSSAY
NTAESCRSTPLTVERSPDNSLQRMISITNRKNLRSTIVANQSSSGQSNRETTSTKTKPTE
QNSAAEDAVLASESSKFADQEKQSSEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQ
KSAVEYAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIK
EERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGS
EGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcaatctgtgcacttttcagaagagagaggagcactacaaactgctctatgaa
gtttcacaggttaatgggaaggacctctccaaggccactcatgaagaggcagtggaagct
tttcgcaacgccaaggagccaattgtagttcaggttttacgacgagccccaattagcaaa
gctcatggtagctctcaggatgttcggcttgtggatgccagcactcagaccgacatcact
tttgagcacattatggctctggccaagctaaggccttccacaccaccagttcctgatatc
tgccctttcctactttcagacagctgccattctcttcacccagtggagcatgaattttat
gaaggtaatgagtatctttccagcctgcctgctgatgcagatagagcagaggactttgag
tatgaggaggtggagctgtgccgggtaagcagccaggagaagctggggctgactgtctgt
tacaggaccgatgatgaggaggacacagggatctatgtcagcgaggttgatccaaacagc
attgctgccagagatggccggatccgtgaaggagatcgcattttgcaaataaatggccaa
gatgtccagaatcgggaagaggcagtggcattgctctccagcgaagaatgcaagaaaatt
gtgttgctggtcgcaagaccggagatgcagctggaagaggggtggctggatgatgaaagg
aatgaattcttagaggagttaaacttggaaatgttggaagagcagcataatgaagcgatg
cagtacacagccaacgaggtggagcagccaaagaaacatgaagaggaggatggcactaca
gacactgcaacctcatcatccaacaatcatgagaaggacagtggggtgggacctacagat
gaaagcctgcgtaacgatgagagctccgagcaagaaaatgcacctgaggagcagaacagc
gcaaccctgcagagcaaacgggagctgggccacagccaagatacattaggaagtgttgag
ctccagtgcaatgaaagctttgtgtctggggaatacattgagtctgatttcataggaaac
ccagaggaggaatgtgaaaggtttcgacagctgttggaactgaagtgcaagattcgaaac
cacggggagtacgacctgtattactcgagcagcacgatagagtgcaacagaagagagcaa
gatggggtggagcatgagctgcagctactcaatgaggaactgaggaacattgaacttgaa
tgtcagaatatcatgcaagcgcatcggctccaaaaggtgagggatcagtatggagacatt
tgggctttacatgacgaagggttcaggaattacaacaccagcatagatgtacaaagaggc
aaactggatgacatcatggagcaccctgagaagtccgacaaggatagctccagtgcttac
aacacagctgaaagttgcaggagcactccgctgactgtggagcgatcccccgacaactct
ctgcagaggatgatcagcataaccaacaggaaaaacctgaggagcacaattgtggctaat
cagtcatcttcaggacaaagcaacagggagacaacctcaaccaaaaccaaacccactgag
caaaacagtgctgctgaggacgcagtgctggcatcagaaagcagcaaattcgcagaccag
gaaaagcagagcagtgagcacattccctacctgtctccatatcacagctcttcttacagg
tacgggaatatacctgctcatgcaaagcattatcaaagttatatgcaactgatccagcag
aagtctgctgtggagtacgcccaaagccagctcagcctggtgagcatgtgcaaagactcg
cagaagtgtgcagagcccaagatggaatggaaagtgaaaataaggagtgatgggacgagg
tacatcacaaagagaccggttcgagacagaatcctgaaggaacgtgccttaaaaattaaa
gaggagcgcagtggaatgacgacagatgatgatacgatgagtgagatgaagatgggtcgc
tactggagcaaagaagagcggaagcagcatttggtgcgagctaaggagcagaggaggcgg
cgggagttcatgatgaggagcaggctggagtgtcttaaggaaagtccacagagtggcagt
gagggcaaaaaggaaattaacattattgaactgagtcacaaaaagatgatgaaaaagaga
aacaagaaaatcttggacaactggatgacaatccaagaactgatgacacacggtgctaaa
tctccagatggcacaagagtgcacaatgcctttttatcagttactactgtatga
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integrated database retrieval system
