Charadrius vociferus (killdeer): 104282764
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Entry
104282764 CDS
T08577
Symbol
CNTN1
Name
(RefSeq) LOW QUALITY PROTEIN: contactin-1
KO
K06759
contactin 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104282764 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cvf04515
]
104282764 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvf00537
]
104282764 (CNTN1)
Cell adhesion molecules [BR:
cvf04515
]
Immunoglobulin superfamily
Contactins
104282764 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvf00537
]
Others
104282764 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
fn3
Ig_2
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Sp38
Interfer-bind
Tissue_fac
DUF4998
Fn3-I_PB4
NDNF
Motif
Other DBs
NCBI-GeneID:
104282764
NCBI-ProteinID:
XP_009879188
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MSVEKAKKGSLFSLHILKALSVCLLIKKLFISNFFSEEGNKGYGPVFEEQPIDTIYPEES
SDGQVSMNCRARAIPFPTYRWKLNNWDIDLTKDRYSMVGGRLVINNPEKSRDAGKYVCVV
SNIFGTVRSSEATLNFGYLDPFPPEERYEVKVREGVGAVLLCEPPYHYPDDLSYRWLLNE
FPIFIALDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPQSDRA
KVYPADIKVKFKDTYALLGQNVTLECFALGNPVPELRWSKYLEPMPATAEISMSGAVLKI
FNIQYEDEGLYECEAENYKGKDKHQARVYVQASPEWVEHINDTEKDIGSDLYWPCVATGK
PIPTIRWLKNGASFRKGELRMQGLTFDDAGMYQCIAENTHGIIYANAELKIVASPPTFEL
NPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTELLVNGSRIRIWDDGSLEIINITKL
DEGRYTCFAENNRGKANSTGVLEMTEATRITLAPLNVDVTVGENATMQCIASHDPTLDLT
FIWSLNGFVIDFEKEHEHYERNLRSPTQNDIKSNGELLIKNVQLRHAGRYTCTAQTIVDN
SSASADLVVRGPPGPPGGIRVEEIRDTAVALTWSRGTDNHSPISKYTIQSKTFLSEEWKD
AKTDPSDIEGNMESATVIDLIPWMEYEFRIIATNTLGTGEPSMPSQRIRTEGAPPNVAPS
DVGGGGGSNRELTITWMPLSREYHYGNNFGYIVAFKPFGDKEWRRVTVTNPEIGRYVHKD
ESMPPSTQYQVKVKAFNNKGDGPFSLTAVIYSAQDAPTEIPTDVSVKVLSSSEMSVSWHH
VTDKSVEGYQIRYWAAHDKEAAAQRVQVSNQEYSTKLENLKPNTRYHVDVSAFNSAGYGP
PSRTIDIITRKAPPSQRPRIISSVRSGSRYIITWDHVKAMSNESAVEGYKVLYRPDGQHE
GKLFSTGKHTIEVPVPSDGEYVVEVRAHSEGGDGEVAQIKISGAAAGVPTLLLVLVVPXP
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtggagaaggcaaaaaagggctcactatttagccttcacattttgaaggcactt
tcagtttgcctactaatcaagaaattattcatttcaaactttttttcagaggaaggaaac
aaaggttatggacccgtttttgaggagcaacccattgataccatctacccagaagaatct
tcagatggacaagtctcaatgaactgcagggctcgagcaattccttttcctacttacagg
tggaaactcaacaactgggatattgatttaacaaaggatcgctacagtatggtgggaggc
agacttgttatcaataatccagagaaatcaagggatgctggaaaatatgtctgtgtagtg
tcgaatatctttggaactgtcagaagcagtgaagccactctgaattttggatatctggat
ccctttccacctgaggaacgctatgaggttaaagtgcgagaaggtgttggagcagtgctt
ctttgtgagcccccttaccactacccagatgatctcagttatcgctggcttctaaatgag
ttcccaatattcattgctttggacaaacgacgatttgtgtcgcagacgaacggcaatctc
tacattgcaaatgtggaagcatcagataagggcaattattcgtgttttgtgtccagcccc
tccataacaaagagtgttttcagtaaatttattccacttattccacagtctgatcgtgca
aaagtatatcctgctgatatcaaggtgaagttcaaggacacatatgctctcctggggcaa
aacgtgacgctggagtgttttgctcttgggaatccggttcctgaactgagatggagtaaa
taccttgaacccatgccagccactgctgagataagcatgtccggtgcagttcttaagatc
ttcaatattcagtatgaagatgaaggactttatgagtgtgaagctgaaaattataaagga
aaagataaacatcaagcaagagtttacgtacaagcatctcctgagtgggtagaacatatc
aatgacacagagaaggatataggcagtgacctatattggccttgcgtagctacgggcaag
cctattccaacaattagatggttgaaaaatggtgcctcgttccggaaaggtgaactcaga
atgcaaggtctgacctttgatgatgccggcatgtaccaatgtatagcagaaaacacacac
ggaattatttatgcaaatgctgaactgaagattgtggcttcacctcctacttttgaactg
aaccctatgaagaagaaaatcctagcagctaaagggggccgtgtaatcattgaatgcaag
cctaaagctgctcctaagccaaagttctcctggagcaaaggaacagaattgcttgtaaat
gggagccgcatacgtatctgggatgatgggagcctggaaattatcaatatcacaaagctg
gatgaaggtcgctatacctgttttgcagaaaataaccgaggaaaagctaatagcactggt
gttctagaaatgacagaagctacaaggattactttagctccgttgaatgttgatgtcacc
gttggagagaatgctaccatgcaatgcattgcatcccatgatcccacattagacctgaca
tttatttggtcactgaatggctttgtaatagattttgagaaagagcacgaacattatgaa
aggaacctgaggtctcccacacaaaacgatattaaatccaacggagagcttctcattaaa
aacgttcagctgcggcatgcggggaggtacacctgcactgctcagacaatcgttgacaac
tcctcagcttcggctgaccttgtggtgagaggtcctccaggccctcctggaggtataaga
gtagaagaaattagagacactgctgtagcacttacctggagtcgtggaacagacaatcat
agtcctatttctaaatacactatccagtcaaaaacctttctatctgaagagtggaaagat
gccaaaacagatccgtcagatattgaaggaaatatggagtctgctacagtgattgattta
attccatggatggagtatgagttccggataatagcaacaaacactttggggacaggagaa
cctagtatgccatcacagagaattagaactgaaggcgctcctcctaatgtggctccttct
gatgttggaggagggggtggaagcaatcgagagttgacaataacatggatgcctttgtca
agagaataccactatggcaataacttcggttatatagtggctttcaagccatttggtgac
aaagaatggcgaagagtcacagttactaatcctgaaattggccggtatgtccacaaggat
gaatcaatgccaccttcaacgcagtaccaagtaaaagtgaaagcttttaacaacaaagga
gatggaccattcagtctgactgctgtcatttattcagcacaagatgctccaactgaaata
cctacagatgtgagcgtgaaagttttgtcatcttctgaaatgtctgtttcttggcaccat
gttactgataagtctgtggaaggatatcagattcgttactgggctgctcatgataaagaa
gcagctgcacagcgggtacaagtgagcaatcaagaatattcaaccaaattggaaaacctg
aagcctaatactcgctaccatgtagatgtttctgccttcaatagtgcaggctatggacct
cccagtagaaccatcgatattattaccaggaaagcacctccgagccaacgtccaagaatt
atcagctctgtaagatctggttcaaggtacatcatcacctgggatcatgtgaaagcaatg
tcaaatgagtctgcagttgaaggatacaaagtactgtatagaccagatggacaacatgaa
ggcaagttgttttcaactggaaagcacacaatagaggtcccagtccccagtgatggtgaa
tatgttgttgaggtccgagcacacagtgaaggaggagatggagaagtggctcaaataaaa
atttcaggtgccgctgctggagtaccgaccctgctcctggtcctggtggtgcctnnaccc
tga
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