Charadrius vociferus (killdeer): 104282808
Help
Entry
104282808 CDS
T08577
Symbol
CACNA1D
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent L-type calcium channel subunit alpha-1D
KO
K04851
voltage-dependent calcium channel L type alpha-1D
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04010
MAPK signaling pathway
cvf04020
Calcium signaling pathway
cvf04218
Cellular senescence
cvf04260
Cardiac muscle contraction
cvf04261
Adrenergic signaling in cardiomyocytes
cvf04270
Vascular smooth muscle contraction
cvf04530
Tight junction
cvf04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104282808 (CACNA1D)
04020 Calcium signaling pathway
104282808 (CACNA1D)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
104282808 (CACNA1D)
09144 Cellular community - eukaryotes
04530 Tight junction
104282808 (CACNA1D)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
104282808 (CACNA1D)
09153 Circulatory system
04260 Cardiac muscle contraction
104282808 (CACNA1D)
04261 Adrenergic signaling in cardiomyocytes
104282808 (CACNA1D)
04270 Vascular smooth muscle contraction
104282808 (CACNA1D)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104282808 (CACNA1D)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104282808 (CACNA1D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104282808
NCBI-ProteinID:
XP_009879239
LinkDB
All DBs
Position
Unknown
AA seq
2074 aa
AA seq
DB search
MSTTTAQPVGSLSQRKRQQYAKSKKQGNTSNSRPPRALFCLSLNNPIRRACISLVEWKPF
DIFILLSIFANCVALAVYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIAYGLLLH
PNAYVRNGWNLLDFVIVVVGLFSVILEQLTKETEGGSHSGGKPGGFDVKALRAFRVLRPL
RLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFIGKMHKSCFLIDSDI
LVEEDPAPCAFSGNGRQCVMNGTECKGGWVGPNGGITNFDNFAFAMLTVFQCITMEGWTD
VLYWVNDAIGCEWPWIYFVSLIILGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREK
QQLEEDLKGYLDWITQAEDIDPENDEEVDEEGKRNTSMPTSETESVNTENVSGEGENPAC
CGSLCRRWRRWNRFNRRKCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDI
ANKVLLALFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGIVETILVELEIMSPLGISV
FRCVRLLRIFKVTRHWASLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFN
FDETQTKRSTFDNFPQALLTVFQILTGEDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFI
CGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKERKKNARXNSTGMLNKREREGGGKE
SLENKKSEKSEGDQKKPKDSKVTIAEYGEGEDEDKDPYPPCDVPGEDEEDEEDEPEVPAG
PRPRRISELNMKEKITPIPEGSAFFIFSSTNPIRVGCHRLINHHIFTNLILVFIMLSSVS
LAAEDPIRSHSFRNNILGYFDYAFTAIFTVEILLKMTAFGAFLHKGSFCRNYFNLLDLLV
VGVSLVSFGIQSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVT
TLLQFMFACIGVQLFKVSRHTQNLHYIKKSKAEGIYIVYKDGDVDNPMVKERVWQNSDFN
FDNVLSAMMALFTVSTFEGWPALLYKAIDSNGENVGPVYNYRVEISIFFIIYIIIIAFFM
MNIFVGFVIVTFQEQGEQEYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKFWYVVN
STGFEYIMFVLIMLNTLCLAMQHYGQSKLFNDAMDIMNMVFTGVFTVEMVLKLIAFKPKG
YFSDAWNTFDSLIVIGSIVDVVLSEADNSEDSARISITFFRLFRVMRLVKLLSRGEGIRT
LLWTFIKSFQALPYVALLIAMLFFIYAVIGMQVFGKVAMRDNNQINRNNNFQTFPQAVLL
LFRCATGEAWQEIMLACLPGKRCDPESDYNPGEEYTCGSNFAIIYFISFYMLCAFLIINL
FVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGF
GKLCPHRVACKRLVAMNMPLNSDGTVMFNATLFALVRTALKIKTEGNLEQANEELRAVIK
KIWKKTSMKLLDQVVPPAGDDEVTVGKFYATFLIQDYFRKFKKRKEQGLVGKYPAKNTTI
ALQAGLRTLHDIGPEIRRAISCDLQDDEPDENNPEEEEDVYKRNGALFGNHINHISSDRR
DSFQQINTTHRPLHVQRPSIPSASDTEKNIYPQAGNSVYHNHHHHNSVGKQVPNSTNANL
NNANVSKVVHGKHTNFGNHEHRSENGYHSYSRTDHEKRRRPSSRRSDSGDGRRPTICREE
REVQDYCNDDHYLGEQEYFSGEEYYEEDSMLSGNRHIYDYHCRYHCHDADFERPKGYHHP
HGFFEEDDSQMCYDTKRSPRRRLLPPTPTPNRRSSFNFECLRRQSSQDDIPLSPNFHHRT
ALPLHLMQQQVMAVAGLDSSKAHKHSPSRSTRSWATPPATPPNRDRTPYYTPLIQVDRAE
STEHMNGSLPSLHRSSWYTDDPDISYRTFTPANLTVPNDFRHKHSDKQRSADSLVEAVLI
SEGLGRYAKDPKFVSATKHEIADACDMTIDEMESAASNLLNGNISNGTNGDMFPILSRQD
YELQDFGPGYSDEEPETGRYEEDLADEMICITSL
NT seq
6225 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaccacagcccagcctgtaggatctctgtcccaaagaaaacgccagcaatat
gccaagagcaaaaaacagggtaatacgtctaatagtcggccaccccgtgcccttttctgt
ttatccctcaacaacccaatacgaagagcctgcattagtctagtagaatggaaaccattt
gacatatttatactactgtctatttttgccaattgtgtggccttagctgtttacatcccg
ttcccagaagatgattctaattcaactaatcataatttggaaaaagtagaatatgccttc
ctgataatttttacagttgaaacatttttgaagattatagcatatggattattattacac
cccaatgcgtatgttagaaatggatggaatttattggattttgtaatcgtagtagtagga
ttatttagtgtaatattggaacaattaaccaaagaaacagaaggtggcagccactcaggt
ggcaaacctggtggctttgatgtcaaagccctaagagcctttcgtgtattgcgacctctc
cggcttgtatcaggagtgcccagtttacaagttgtcctgaactccattataaaagccatg
gttcccctcctccatattgcccttttggtattgtttgtaatcataatctatgctattata
ggattggaactttttattggaaaaatgcacaaatcttgttttcttattgattcagatata
ctagttgaagaagatccagcaccttgtgcgttctcagggaatggacgtcagtgtgtcatg
aatggcactgaatgtaagggtggatgggttggaccaaatggaggcataaccaactttgat
aattttgcatttgcgatgttgactgtgttccagtgtataaccatggaaggatggacagat
gtgttgtactgggtaaatgatgcaataggatgtgaatggccatggatctattttgttagt
cttatcatccttggctcatttttcgtacttaacctggttcttggtgtacttagtggagaa
ttttccaaggaaagagaaaaagccaaggcccgaggggactttcagaaactacgtgaaaaa
cagcagcttgaagaagatctgaagggatatttagactggattacacaggcagaagacatt
gaccctgagaatgatgaagaggttgatgaagaaggcaagcggaatacaagcatgcccacc
agtgaaaccgaatcggtgaacacagagaatgtcagcggagagggagagaacccagcatgc
tgtgggagtttatgtcgacgctggcgtcgctggaatcgatttaatagaagaaaatgtaga
gctgcagtaaaatctgtcacattttattggcttgttattgtcttggtctttctgaacaca
ttaactatctcatcggaacattataatcaacctgactggctgacccagatccaagatata
gcaaataaggttcttctggctttattcacctgtgaaatgttagtaaagatgtacagcttg
ggcctacaggcttatttcgtttctctttttaaccgctttgattgcttcgttgtttgtggt
ggcattgttgaaaccattttggtggaattggaaattatgtcgccccttggaatttcagtg
tttcgctgtgttcgtctcctgcgtatttttaaagtaacaaggcactgggcatccctgagc
aacttggtagcatccttgttaaactcaatgaagtccattgcttcactgttgcttctgctt
ttcctcttcatcataatcttctcgttgcttggaatgcagctgtttggaggcaaatttaat
tttgatgaaactcaaacaaaacggagcaccttcgataattttccacaagctcttttaact
gtattccagattctaacaggtgaagactggaatgctgttatgtatgatggcataatggca
tacggtggcccatcatcatcaggcatgatagtctgtatatatttcattatcctcttcatc
tgtggtaactatatcttgctaaatgtcttcttggccattgctgtggataacttggcagat
gctgaaagtctaaatacagctcagaaagaagaagctgaagaaaaagaaaggaaaaagaat
gcgaggtaaaatagcacaggcatgttgaataagcgggagagagaaggaggaggaaaagag
agtctggaaaataaaaaaagtgagaagtcagaaggtgaccaaaagaagcccaaggatagt
aaggtgacaattgctgaatatggagaaggagaggatgaggacaaagatccctatccaccc
tgtgatgtaccaggtgaagatgaagaagatgaagaggatgaaccagaggtaccagcaggc
ccacgtccccgtagaatatcagaactaaatatgaaggagaagataacaccgatccctgaa
gggagtgccttcttcattttcagcagcaccaatccaattcgagtgggatgccacagactc
atcaatcaccacatctttaccaatctcatccttgtcttcatcatgctgagcagtgtttcc
ctagcagcagaagatccaattcgcagccactcttttcgaaataatatacttggttacttt
gactatgctttcacagccatctttactgttgaaatcctgttaaagatgacagcttttgga
gcattccttcataaagggtccttctgcaggaattattttaatttgctggatttgctggtc
gtgggtgtttctctggtatcatttggtattcaatcaagtgctatctcagttgtgaagatc
ctcagagttttaagagtcttgaggcctctaagggcaataaacagagcaaaaggacttaag
catgttgttcaatgtgtctttgtggctattagaactattggtaatatcatgatcgttaca
actctgctgcagttcatgtttgcttgtattggagtgcagctgttcaaggtaagtagacac
actcaaaatttacactacatcaagaaaagcaaagctgaagggatatacatcgtttataaa
gatggagatgttgataatccaatggtcaaagagagggtttggcaaaacagtgatttcaac
tttgataatgttctgtctgctatgatggccctttttacagtatccacttttgaaggctgg
ccagcgctgctatacaaagccattgattcaaatggcgagaatgtaggacctgtatacaac
tacagagtggagatctcaatttttttcatcatctatatcatcattattgctttctttatg
atgaacatatttgttggttttgtgattgttacattccaagaacagggagaacaagagtat
aagaactgcgagctggacaaaaatcagcgtcagtgtgtagaatatgccttgaaggcacgt
cctcttcgtagatatattccaaaaaatccttaccagtacaagttctggtatgtggtgaat
tctactggatttgaatacatcatgtttgtcctcatcatgctgaacacactttgcttggct
atgcagcactatggacagtctaagctctttaatgatgcaatggacattatgaatatggtt
ttcacgggagtgttcactgttgaaatggttttgaaactgattgcattcaaacccaagggc
tattttagtgatgcctggaatacgtttgactccctcatcgttattggcagcatagtagac
gtcgttctcagtgaagctgataactctgaagacagcgctagaatctccatcacgtttttc
cgtctcttccgggtgatgaggttggtgaagctacttagcagaggagaaggaatcagaact
ttactgtggacatttattaagtcttttcaggctctgccttacgttgcccttctgatagcc
atgctgttcttcatctatgctgtcattggaatgcaggtatttggaaaagtggccatgagg
gacaacaatcaaataaacagaaacaacaattttcagacttttccccaagctgtgctgctt
ctgttcaggtgtgcaactggagaagcgtggcaggaaatcatgctggcatgtttgcctgga
aaacgctgtgatcctgaatccgattataatccaggagaagaatacacatgtggaagcaat
tttgccatcatttattttatcagtttttacatgctttgtgcatttttgattataaacttg
tttgtggctgtcattatggataattttgattatttgacacgtgactggtctattctgggt
ccccatcatttggatgagttcaaaaggatatggtcagaatatgaccctgaagcaaaggga
aggataaaacatcttgatgtggtcacattactgagacgcattcagccgccacttggtttt
ggcaaattatgccctcaccgagtggcctgtaagaggttagtagccatgaatatgccacta
aacagcgatggaaccgtcatgtttaacgctactttgtttgctttggttaggactgctcta
aagataaaaacagaaggtaacctagagcaagcaaatgaagaacttagagcggttataaag
aaaatatggaagaaaacaagcatgaaattacttgaccaagttgtccctccagctggcgat
gatgaggtaaccgtggggaagttctatgccaccttcctgatacaggactactttaggaaa
ttcaagaaacgcaaagaacaaggactggtggggaaatatcctgcgaagaataccacgatt
gctctgcaggcaggactaaggacacttcatgatattggccctgaaatacgccgagctata
tcctgtgacttgcaagatgatgaaccagacgaaaacaatccagaggaggaggaagatgtt
tataaaaggaatggtgccctctttggcaaccacataaaccatattagcagtgacagacga
gattcatttcaacagatcaacaccacacaccgtcccttacatgttcagcggccttccatt
ccatctgcaagcgatactgagaaaaatatatatcctcaggcaggaaattctgtgtaccac
aatcatcaccatcacaactcagtaggaaagcaagttccaaactcaacaaatgccaatctc
aataatgccaacgtgtccaaagttgttcatggaaaacacacaaattttggaaatcatgag
catagatctgaaaacggttaccattcttactccagaactgatcatgagaagcgtagaagg
ccaagcagtaggagatctgactctggtgatgggcgtcgacctactatttgccgcgaagaa
cgtgaagttcaagactattgcaatgatgatcattatttaggagagcaggaatattttagt
ggagaagaatattatgaggaagacagtatgttgtcaggaaacaggcatatatatgattac
cactgtagatatcactgccatgacgcagattttgagagaccaaaaggttaccatcaccca
catgggttttttgaggaagatgattcacagatgtgttatgatacaaaaagatctcctagg
agacggctgctacctccaacaccaacaccaaatagacgatcttcctttaacttcgaatgc
ctccgccgacaaagtagtcaagatgacataccactctctcctaatttccaccatcgcacc
gctttaccgcttcacttaatgcaacagcaggtcatggctgttgcaggtctggattccagc
aaagctcataaacattcaccaagtcgttcaacgcgttcctgggccaccccacccgccacc
cctcccaacagggaccgcactccatattacacgcctctcatccaggtcgacagggctgaa
tctacagagcatatgaatggcagcctgccttccttgcacaggagctcttggtacacagat
gaccccgatatctcctaccgaacatttacaccagccaatttaactgtacctaatgacttt
aggcataaacatagtgacaaacagaggagtgcagacagtttggtagaagcggtacttata
tctgaaggcctaggaaggtatgcaaaggaccctaaatttgtttcggctacaaaacatgag
attgccgatgcatgtgacatgactattgatgagatggaaagtgcagcaagtaatcttctc
aatggaaatattagcaatgggaccaatggggatatgtttcccattttaagcagacaagat
tatgaacttcaagattttggtcctggctacagtgatgaagaaccagaaacgggacgatat
gaagaagatttagctgatgaaatgatatgcattacgagcttatag
DBGET
integrated database retrieval system
