Charadrius vociferus (killdeer): 104282856
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Entry
104282856 CDS
T08577
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
104282856 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104282856 (MYO5B)
04131 Membrane trafficking [BR:
cvf04131
]
104282856 (MYO5B)
03029 Mitochondrial biogenesis [BR:
cvf03029
]
104282856 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cvf04812
]
104282856 (MYO5B)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
104282856 (MYO5B)
mRNA cycle factors
P-body specific factors
104282856 (MYO5B)
Membrane trafficking [BR:
cvf04131
]
Others
Actin-binding proteins
Myosins
104282856 (MYO5B)
Mitochondrial biogenesis [BR:
cvf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
104282856 (MYO5B)
Cytoskeleton proteins [BR:
cvf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
104282856 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
5_3_exonuc
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
104282856
NCBI-ProteinID:
XP_009879287
LinkDB
All DBs
Position
Unknown
AA seq
1838 aa
AA seq
DB search
YTRVWIPDPDEVWRSAEIIKDYKEGDKSLHLKLEDETLYEYPIDLQGNELPFLRNPDILV
GENDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYEQDVIYAYSG
QNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFFATVGGSASE
TNIEAKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMRTYLLEKSRV
VFQAEDERNYHIFYQLCASASLPEFKDLGLTCAEDFFYTSQGGNTYIDGVDDDDDFEKTR
HAFTLLGVKESHQTTIFRIIAAILHLGNLEIQGERDGDACSVSSEDEHLNNFCGLLGVEH
SQMQHWLCHRKLITTAETYVKNMSVQQVVNARNALAKHIYAQLFNWIVQHINKALHTTVK
QHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMKEGIPWTLID
FYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHSSSQHFQKPRMSNTSFI
VLHFADKVEYQSEGFLEKNRDTVYEEQINILKASKYQMVADLFQDEKDAAPTTSVGKGTS
KISVRSARPVIKAANKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDEKLPFKFD
PKRAVQQLRACGVLETIRISAAGFPSRWSYHDFFNRYRVLMKKRDLSKNDKKQICQTLLE
DLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRVKYQRLRQA
AIVVQRYTRGHLARRLAEHLRRTRAAIIFQKQYRMLQILRAFQRVRNATITIQAFARGMF
VRRIYHKILMEHKATILQKYARGWLARTRFRQVRGATIVLQCYYRRMKARQQLKVLKIEA
RSAQHLKKLNIGMENKVVQLQRKIDEQNKEYKLLNEQLSTLTSAHSSEVEKLKKELVQYQ
QSHRGEGNQLVSLQEEMEHLRLELEKAHGERKVVEDSYVKEKDLLRKRISDLEEENALLK
QEKEELNSRILCQSEDEFARNTVEENIQMKKELEEERSRYQNLVKEYSRLEQRYDNLRDE
MTIIKQTPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDVVQQVEEVGMEKAAMDMTLFL
KLQKRVRELEQERKKLQTQLEKKEQESKKSQVIEMKTEVTLDHEDFAYNSLKRQELESEN
KKLKNELNELRKAIADRATQNNSSNDIQDSYNLLLNQLKSANEELEVRKEEVLILRTQIM
KAAQQKETGKNMESITTNASWPNSDKHIDQEDAIEAYQGMCETNRKTEDWGYLNEDGELG
LAYQGLKQVARLLEAQLQDQRREHEEEVEALKNEVDAMKEELEKQQQAFLQTLQLSPEAQ
VEFGLQQEITRLTNENLDLKELLEKLEKNEKKLKKQLKIYMKKVQDFEASQAAVPAERRH
HERNMQVAVQRKEKDFQGMLEYYKEDEPLLIRNLITDLKPQAVSATVPCLPAYILYMCIR
HADYINDDQKVHSLLTSTINGIKKVLKKHNDDFQMTSFWLANTCRLLHCLKQYSGDAGFM
TQNTPKQNEHCLKNFDLTEYRQVLSHLSIQIYQQLIKIAEGILQPMIVSAVLENESIQGL
SGVKPMGYRNRSSSMADGDSSYSLDAIIRQLNVFHNIMCDQGLDPEIVQQVFKQLFYMIN
AVALNNLLLRKDVCSWSTGMQLRFNISQLEEWLRGKNLQQSGAAQTLEPLIQAAQLLQLK
KKTSEDAEAICSLCTSLTTQQIVKILNLYTPVNEFEERVTVAFIRDIQTHLQDRNDPPQL
LLDFKHMFPVLFPFNPSSITMDSIHIPASLNLEFLNKV
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
tacaccagggtttggattcctgaccctgatgaagtttggagatcggcagaaattatcaag
gattacaaagagggagataaaagcctccatctgaaacttgaagatgaaactctctacgaa
tatcctattgacctccaaggaaatgagctacctttcctgcgcaacccagatattctggtg
ggagagaatgacctgacagccctcagctacctgcacgagcccgcagtcctccacaacctc
aaagtcaggttcctcgagtccaaccacatctatacgtactgtggtattgtacttgttgcc
atcaatccatatgagcagctgccaatctatgaacaagatgtcatctacgcatacagtggc
caaaacatgggggatatggatcctcacatctttgcggtggcagaggaagcctataagcag
atggccagggatgagaagaaccagtccatcatcgtgagtggggagtctggtgctggaaag
acggtctctgccaaatatgccatgcgcttcttcgcaaccgtcggtggttctgccagcgag
accaacatcgaagccaaagtccttgcgtcgagcccaattatggaggcaattggaaatgct
aaaacaacaaggaacgacaacagcagtcgcttcgggaagtacattcagatcggctttgac
aaaagataccacatcattggtgccaacatgagaacatatctgttggaaaaatcacgagtt
gtattccaggcggaggatgagcgcaactaccacatcttctatcagctttgtgcctcggcg
agtcttccagaattcaaagaccttggactaacatgtgccgaagactttttctacacttct
cagggaggtaacacgtatatcgatggcgtggatgatgatgatgactttgagaaaaccagg
cacgccttcaccctgcttggagtgaaggagtctcatcagacgaccatttttaggataatt
gctgccattctgcacctaggcaacttggaaatccaaggggaacgagatggcgatgcctgt
agcgtatcgagcgaagacgaacacttgaacaacttctgtggcttgctgggtgtggagcac
agccagatgcagcactggctttgccatcgcaagctcatcaccacggccgagacctacgtg
aagaacatgtccgtgcagcaagtggtgaatgccaggaacgccctggccaagcacatctac
gcccagctcttcaactggatagtgcagcacatcaacaaggccctgcacaccaccgtcaag
cagcattccttcatcggcgtgctcgatatctacgggtttgaaacttttgaagtgaatagc
tttgaacagttttgtatcaactatgccaacgaaaagctccagcagcagttcaactcgcac
gtgtttaagctggaacaagaagagtacatgaaggagggaatcccttggactctcatcgac
ttctacgataaccagccctgcatagaccttatagaggcaaaacttggtatcttggaccta
ctggatgaagagtgcaaggttcctaaaggcaccgaccagaactgggcacagaagctgtac
gaccggcactccagcagccaacacttccagaagccccgcatgtccaacacctccttcatc
gtcctacacttcgctgataaggtggaataccaaagcgagggatttctggagaagaacagg
gacaccgtgtacgaggaacagatcaacatcctgaaagccagcaagtatcaaatggtagcg
gacttattccaagatgagaaggatgctgcgcccaccacttccgtgggaaagggaacatcc
aaaatcagcgtccgttctgccagaccggtgatcaaagctgccaataaggagcacaagaaa
acggtgggccaccagttccgcaactcgctgcatttgctcatggagactctgaatgccacc
acgccgcactacgtgcgctgcatcaaaccgaacgacgagaagctcccctttaaatttgat
ccgaagagagcggtgcagcagctgagagcttgtggagtgctggagaccatccgcatcagt
gcagctggcttcccgtccagatggtcctaccacgactttttcaataggtatcgtgttctt
atgaaaaagagagacctttctaagaacgacaagaagcagatctgtcagaccctgttggaa
gacctcattaaggatccagacaagttccagtttggacgtaccaagatctttttccgtgca
ggccaggtggcatatctggagaaactgcgagcagataagttcagagctgccacgatcatg
attcagaagacggtgcggggctggctgcagagggtcaagtaccaaaggctgagacaagct
gcaatcgtcgtccaacgctacacgcgtgggcacctggcgcggaggcttgccgagcacctg
aggaggacgagagctgccatcatcttccagaagcagtaccgaatgctgcagatcctccga
gctttccagagggtccgcaacgcaaccatcaccattcaggcttttgctcggggcatgttt
gtcaggaggatttatcacaagatcctcatggagcacaaagccaccatcctccagaagtat
gcccgtggttggctggcccgcactcgcttccgccaagtcaggggtgccaccatcgtcctg
cagtgctactaccggcgcatgaaggccaggcagcagctgaaggtgctgaagatcgaggcc
cgctcagcgcaacacctgaagaagctcaacattggcatggagaacaaggtggtccagctc
caaaggaagattgatgagcagaacaaggaatacaaacttctgaacgagcagctctctacg
ctcacgtcagcccactcctccgaggtagaaaagctgaagaaggaactggtgcaatatcag
cagagccaccggggtgaaggcaaccagcttgtcagcttgcaggaagagatggaacatctc
cggctggagcttgaaaaagctcatggcgagaggaaggtcgtggaagacagctacgttaag
gagaaagacctgctgagaaagcgcatatccgacttggaagaagaaaatgctctcctgaaa
caggaaaaagaggagctgaacagcaggatcctgtgtcaatctgaagatgaatttgcacga
aacacagttgaggaaaatatccagatgaagaaagagctggaagaagagaggtctcgttat
cagaacctggtaaaagagtattccaggttggagcagagatatgacaacttgcgcgatgaa
atgactattataaagcaaacaccgggacacaggagaaacccgtccaaccagagcagtttg
gagtccgattccaattatccatccatatcaacctctgagataggagacacggaggatgta
gtgcagcaagtggaggaggttgggatggagaaagcagccatggacatgaccctcttccta
aagctacagaagcgagtacgggagctcgagcaggagaggaagaagctgcaaacccagctg
gagaaaaaagagcaagagagcaagaaatcccaggtaattgaaatgaagaccgaagtgact
ttggaccatgaagattttgcatacaacagtttgaagaggcaagagttggagtcggagaac
aagaagctgaaaaatgagcttaatgagctgaggaaggctattgcagaccgagcaacccag
aacaactcgtccaacgatattcaggacagttataacctcttactgaatcagctgaaatcg
gccaacgaagagttggaggtgcggaaggaagaggtgctcatcctgaggacacagattatg
aaggcagcccagcaaaaagagacgggcaaaaacatggaaagcatcaccaccaacgccagc
tggcccaacagtgacaaacacattgatcaggaggatgcgatcgaagcctaccagggaatg
tgcgagacgaaccgcaagactgaggactggggctatctcaatgaagatggagagctcggc
ttggcttatcaaggtttaaagcaagttgccaggttgctggaagcacagctccaggatcag
agaagagagcacgaggaggaggtagaagctctgaaaaacgaggtggatgcgatgaaagaa
gagctggagaaacagcagcaggctttcctgcagaccctgcagctgtctccggaggctcag
gtggagtttggacttcagcaagaaattacacgtctcaccaatgaaaacctggatcttaaa
gaattgctggagaagttggaaaagaatgaaaagaagctgaagaagcagctgaagatttac
atgaagaaggtccaagattttgaagcatcccaagctgcggtaccggcagagagaaggcat
cacgagcgtaacatgcaagttgctgtccagaggaaagagaaagattttcagggcatgttg
gaatattataaagaagatgagccactcctcatccgaaacctcattacagacctcaagcct
caggcagtgtctgctactgttccctgccttcctgcctatatcctttacatgtgcatcaga
cacgcggattacatcaacgatgaccagaaagtgcactccttgctcacctccaccatcaac
ggcattaagaaagtgctgaagaaacacaacgatgattttcagatgacgtcgttttggctg
gcgaacacgtgtcgcctcctgcactgtttaaagcagtacagcggagacgcgggtttcatg
acacaaaacacgcctaagcagaacgagcactgtctgaagaattttgacctgaccgagtac
cgccaggtgctgagccacctctccatccagatctaccagcagctcattaagatagcagag
ggcatactccaacccatgattgtgtctgcggtgttggaaaatgagagcatccaggggctt
tctggtgtcaaaccaatgggctacaggaatcgctcctccagtatggcagatggtgacagc
tcctacagcttagacgcaatcattcgccagctgaacgtgttccacaatatcatgtgtgac
cagggcctggacccagagatcgtgcagcaggtcttcaagcagctcttctacatgatcaac
gccgtcgccctgaacaacctcctgctgagaaaggatgtctgctcatggagcacgggcatg
cagctaaggtttaacataagccagctggaggaatggctgcgtgggaagaacctgcagcag
agtggagcagcacaaactttggagcccttgattcaggcggcacagctgctgcagctgaaa
aagaaaacctcggaagatgccgaggccatctgctccttgtgcacatcgctcaccacgcag
cagattgtaaagatacttaatctctacactcctgtgaatgagtttgaagagcgcgtgaca
gtagctttcatacgagacatacagacgcacttgcaagatcgcaacgatcctccgcagctg
ctgttagacttcaagcacatgttccccgttttgttcccgttcaacccatcctccataacc
atggactccattcatatccctgcttctcttaacttggaatttctcaataaagtctga
DBGET
integrated database retrieval system