Charadrius vociferus (killdeer): 104283231
Help
Entry
104283231 CDS
T08577
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104283231
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
104283231
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104283231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Helicase_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
104283231
NCBI-ProteinID:
XP_009879689
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
MEVLVLKIEDPGCFWVTMKGCGPYVVDEIEYKNLNAEMNQFYDKSYKDVDAVKPLTVKEG
QIYVVFSEELKCWCRAVIKSIMYCTDHYQTECFLVDYAKYIFVKSKDIRVALEAFMQIPY
RAKKCRLYRTKPVTLRIDFCEDTAKIVPAKRWDSAATRYFQNLLKATTQMKAKLCAVEDN
TFDVFLYVTIKDEKVCVNDDLVSKNFAHFEEAKETTGGSADYQENQTLLNIECLPVKIVN
PVLAFRPMVFQEKVPTNLETDPSVASSCLEETYQRPSTGLNENTASSVRSLHEERNFVFL
SNKIEPSSILETAPLFDDLKKELNRKKILGPNFTESYCWPPVARGCDVVAISYEGNNPFL
YIPPVLTFLQSGSCYKALPNRNGPLALILCPGWKKAQLVFELLKTYERCSRQLHPMLIIL
GQNKEETRSVKIQGCEVIVTTPYSLLRLFEHHNLLFCRLCHLVLDEIEVLFSDATEQVFT
ILDCYKKAIITEEREYSPHQIIAVGTCWNKHIARLIKEFMNDPYIVITATEEAPIYGNVQ
QVVQLCTNSERTAVLLKILDFTHDNLQKVLVFTNSVNEAEMVHKALRSNSIFALKIHKES
EWNFKYILEQWTKKYSSGTGVVLVLTDDCMQSLGITDATCVIHFSLPSPRIFGQRLHSMS
DNFCNVIEDSSVDQECTKARSVILLTESSACHTLGILRYLQHAEAEIPPELHDFTAKMLE
AEEDKKFSRPLCAYLKTFGICKNRTVCPDRHQINLQIDMPQNIPDEVTRTPACVTIIPLH
IVNATNYFGRIVDKRKDEYTILAEEINEYFKKSSNKTSVKNVEKLAFYGLCEKTLFHRVQ
VVEISPKEEENLFFNVKIKYIDEGRTSQVPSYQLLHLPARFQCLPPQAVEFVVCRVKPID
NEIEWNPKVTHYINHKIKGKLHEAKIVYTLGNTAWVDPMVRVTRLTDLKMSINEYNVRSE
ILSTGLGADNPEHITELQKLCGHLKVLDHAKNLEPLVMKEDTAGPENVSNLQNMSIQENS
TENCHSSKITLWNNPCGGVAQTREAEDSTLPQRKCFYPEIKWFQNEETVTVKVKIASIAD
SKCEFSKEKVVFSACSGDKLYLANMELHQYIQAEKSTCLIKDKEAVIVLTKEKKGAWCKL
LKSKNPHVSFDFEHWEDVEDKGPFPVGTKKLYCTDAVTEELVDSSEDSGTESDE
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcttggtattaaagattgaagatccaggttgcttttgggttactatgaaagga
tgtgggccttatgtagtcgatgaaatagaatataaaaacctgaatgctgaaatgaatcag
ttctatgacaaatcttataaagatgtggatgcagtaaaaccactaacagtaaaagaaggc
cagatttatgtggttttcagtgaggaactaaaatgctggtgtagagcggttattaagtca
atcatgtactgtacagatcattatcaaacagaatgttttcttgtggattatgcgaaatac
atttttgttaaatcaaaggacattcgagttgcactggaagcatttatgcagatcccatat
agagcaaaaaagtgtagactgtatcgcacaaaaccagtgacattgcgtatcgacttttgt
gaagatactgcaaaaatagtaccagccaaaagatgggatagtgctgctactcggtatttt
cagaaccttctcaaagcaactacccaaatgaaagcaaagttatgtgctgtagaagataac
acatttgatgtatttctttatgtgacaataaaagatgaaaaggtgtgcgttaatgatgat
cttgtctcaaagaactttgctcattttgaggaagctaaagagaccaccgggggttctgca
gattatcaggagaaccaaacgttattaaatattgaatgtcttccagtgaaaattgttaat
cccgtgcttgcattcaggccaatggtgtttcaggagaaggtaccaacaaatctggaaaca
gatccttctgttgccagttcctgtcttgaagagacttaccaaaggccaagcacaggtcta
aatgaaaatactgcgtctagtgttcgaagtctgcatgaagaaagaaactttgtctttctt
agcaacaaaattgagccatcgtcaattctggaaacagcaccactttttgatgatctgaaa
aaggaacttaatcggaaaaaaattttaggccctaacttcacagaatcttactgttggccg
ccagtagctcgaggatgtgatgtagttgccatctcatatgagggaaataatcctttttta
tatattccaccagttcttacatttttgcagtcgggaagttgctacaaagccttgccaaac
aggaatggaccgctagcacttattttatgtcctgggtggaagaaggcacaacttgttttt
gagctactgaaaacgtacgagagatgctccagacagcttcatccaatgttaataatactt
gggcagaacaaagaagaaaccagaagtgtgaaaatccaaggatgtgaagtaattgtgact
acaccatatagcctcctgagactgtttgaacatcacaatttattgttttgtagactttgc
catcttgttcttgatgagattgaggtactgttctctgatgctactgaacaggtgtttact
atattagattgttataagaaagccattattactgaagagagggaatattctccgcatcag
attattgctgttggaacttgttggaataaacatatagcacgcttgataaaggagtttatg
aatgatccctacattgtgataactgctacggaagaagctcctatctatggaaatgtgcaa
caggttgtgcaactgtgcacaaacagtgagagaactgctgtgttactcaaaatactggat
tttacccacgataatcttcagaaggtgctggtattcactaattcagtaaatgaagcagaa
atggttcataaggcactgaggagcaactccatatttgccttgaaaatacataaagagagt
gagtggaatttcaagtatatcttagagcagtggacaaaaaaatacagttctggcactggt
gttgtgttagttttaacagatgactgcatgcagtctttgggaattacagacgcaacttgc
gtgatacatttcagtcttccttctccaagaatctttggtcaacgtctgcacagcatgtct
gacaacttctgtaatgtcatagaggattcttctgtagatcaggaatgtacaaaggcaagg
tcagtcattctgctaacagaaagcagtgcgtgtcatacacttgggatcctgcgctatttg
cagcacgcagaagctgaaattccaccagaactgcatgattttactgccaagatgctagaa
gctgaagaagataagaaattttcaaggccactgtgtgcctatcttaaaacatttgggatt
tgcaagaatagaacagtgtgtccagatcgtcatcaaattaatttacaaatagatatgccc
cagaatataccagatgaagttacacgaacgcctgcatgtgtgacgataatacctctccac
attgtaaatgcaacaaactactttggtcgaatagtagataaacgaaaggacgaatataca
attcttgctgaggaaattaatgagtattttaagaaatctagtaataaaacttctgttaaa
aatgtggagaagctagcattttatggattatgtgagaaaacacttttccacagggttcag
gtggtagagatttcccccaaagaggaggaaaacttgttctttaatgtcaaaattaaatat
atagatgaaggcagaacaagtcaagttccgagctatcagctgcttcacttacctgcaagg
tttcagtgtctgccacctcaggctgtggaatttgtagtttgtagagtgaaacccattgat
aatgaaattgagtggaacccaaaggtaactcattatattaatcacaaaattaaaggaaaa
ctacatgaagcaaaaatagtttataccttgggaaatacagcttgggttgacccaatggtc
cgggttactagacttacagatttgaagatgtcgatcaatgaatataatgttcgatctgag
attttgtctacgggtctgggagctgacaatccagaacatataacagaacttcagaagttg
tgtggacacttgaaagtattagatcatgcaaagaacttagagcctttagtcatgaaggag
gacacagctggtccagagaatgtgtccaatctgcagaatatgtcaatacaagaaaattct
actgaaaactgtcattcttctaaaattactttgtggaataatccatgtggtggtgtagct
caaactagggaagcagaagactctaccctgcctcagcgtaaatgcttttatccagaaata
aagtggtttcaaaatgaagagactgttacagtgaaggtaaaaatagcaagcatagctgac
tctaagtgtgagttctctaaagagaaagtggttttcagtgcttgttcaggagacaaactt
tatttggctaacatggagctgcatcaatatatacaagcagaaaagtctacatgtctgatt
aaagataaagaagctgttattgttctcacgaaagagaagaaaggagcatggtgcaaatta
ctgaagagcaagaatcctcatgtgtcttttgattttgaacactgggaagatgttgaagat
aaaggcccttttccagttggtactaaaaaactgtattgcactgatgcagtaactgaagaa
ttggttgactcttcagaagacagtggaacagaaagtgatgagtaa
DBGET
integrated database retrieval system
