Charadrius vociferus (killdeer): 104283381 Help Entry 104283381         CDS       T08577                                  Symbol COL17A1 Name (RefSeq) collagen alpha-1(XVII) chain   KO K07603   collagen type XVII alpha Organism cvf  Charadrius vociferus (killdeer) Pathway cvf04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:cvf00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     104283381 (COL17A1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen DUF5006 DUF4869 Motif Other DBs NCBI-GeneID:  104283381 NCBI-ProteinID:  XP_009879845 LinkDB All DBs Position Unknown AA seq 1495 aa AA seqDB search MDSVTKKTRQDGSEVTERQGGSSSGLKTSSHTGGSGVEKRSYTHGSSYMTSSGSGRLNSS SSSGYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSPEFPRKELASTSTRGR SQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSPSSTLPIPKKAVVETK MVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSSSLINAMSHSTGSVFGV PNNLAPSNHTLNAGLSTSSTVFGVQNNLSPSSSSLTQNATAASAAYGMKNTSQSNTMAST GVSASAGGTVLSSQGDDILRKDCKFLLLEKENAPAKKEMELLIMTKDSGKVFSASTTGLN GGSFVEDTLKKEKQGFSSSYATDTGLKLDANGALKSVPTRDKATYAEIRNGDVGGAIGSA PSWCPCGSCCSWWKWLLGLLLAWLLLLGLLFGLIALAEEVRKLKSRVENLEKINGGLLAM NQGNSKIEKDVSRVDYLHGISPSSTFPYENEESVWLMVKNRLNKEVERGYFRGERGEPGQ KGDMGPRGESGERGLPGVPGXXXXXXHQGPEGPKGQKGSMGDPGMEGPMGQRGREGLPGP RGEPGPPGFGEKGDRGVVGEPGPPGPPGPPGSAGLKGLMGSPGPQGPPGPPGLQGFRGEA GLPGAKGEKGASGAPGPKGDQGEKGSRGMTGEQGSRGMPGPPGEPGAKGPVGQAGRDGQP GDKGEPGLMGMPGARGPPGPSGDAGQPGLTGPQGPPGLPGNPGRPGAKGEPGAPGKVISA EGSSTIALPGPPGPPGPAGPTGPPGVPGPVGPAGLPGQQGPRGEKGSPGEAVIETIKTEV SSLASQMMADLQGRAGPPGPPGPPGESVQGPPGPRGPPGLPGPPGPPGRPASSMSTSEAF FTGPPGPPGPPGPKGDQGERGPRGLTGEPGDPGLSAFSSHGDRVTIQGPPGVPGPPGPPG PKGDAGVPGAPGIPGASRGGSRQLQGPPGPPGPPGPPGPGGSSSQEIQQYVTDYLKSDNV RHYLTGAQGPPGPPGPPGVITTADGMNLDYAELATRVMSYMTSSSDRYQSFASSVSTTSF LYQELLDLLQREEIRQYLIGPQGPPGPPGPGGDGMSLSLDYDELTRRFISYLTSSGMSIG LPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPGPAGPPGPPGIPGSPGTSLEDVSAYL QSVGYSSFSGVRGPPGPPGPPGPPGFSGTGLLSYADITHSDEFRSELIQYLKSDEVRSYI SGPPGPPGPRGPPGPKGDSGLVAGAMSSSYEGLRTSERMHGGSLGAEGSHGGSLGTGSSY GGSMSSMSSYSASRGSDASMGSDGSFDGLLTEEETHRRSSGSSRSYSNSFAGSLDYNELA LRVSESLQSQGILQDLMSYTAQGPAGPPGPPGPPGISRVFATYGNVTADLMDFFRTYGTI QGPPGEKGERGYPGPKGDPGPMGPPGRHGHRGPKGEKGEKGEQVYVGRRKRSVGV NT seq 4488 nt NT seq  +upstreamnt  +downstreamnt atggattctgtaacaaagaaaacgcggcaagatggatcagaagttactgaaagacaagga ggcagcagcagtgggctcaaaacatcatcccacactggagggagcggagtggaaaagagg tcttacacccatggcagcagctatatgacttcaagtggaagcggtagattgaattcatca tcatcctccggctacagacaaacccagtctcccagctctactctcaccaaatcacctggt tcaacatttgaaagaaaaacctatgtcaaccgccatgcaacatatgaagggagctccagt gccaactcttctcccgagttccccagaaaagagcttgcatctacctccactagagggaga agccaaagtcgagagagtgaaatacgagtccgactgcagagcgcatctccctctggcaga tggacagagttggatgatgtgaaacgtttgctgaaaggaagtcgatcagccagctgcagc cctactcgatcaccgtcaagtacactcccaataccaaaaaaggctgtggtggagacgaag atggtaactgagagctctcagtcagtgtcagggacatatgatacaactatactgaatacc gccctcccttcatacatgtggtcttccactctgcctgctgggtcttcccttggtggatac cataacagctcttccttgatcaatgctatgtctcactccacaggatcagtttttggtgtt ccaaataacctggctcccagcaatcatactctgaatgcaggcctgagcacttcttctaca gtgtttggagttcaaaacaacctgtctccaagctcttcatccctgactcagaatgcaact gcagcctctgcagcatatgggatgaagaacacttctcagagcaacactatggcaagtacc ggtgtgtctgcctccgcagggggaacggttttgagctcccagggagatgacatcctgcgc aaagactgcaagttcctgctgctggagaaggagaatgccccagcaaagaaagagatggaa ctcttgatcatgacaaaagacagtggcaaagtctttagtgcctctaccactgggcttaat ggaggatccttcgtagaagacaccttgaagaaggagaagcagggattttcctcctcttat gctacagatactggactaaaattggatgcaaatggagcactgaaatctgtgccaacaagg gacaaagcgacttacgcagaaatacgaaatggtgatgtggggggtgcaattggatcagca ccatcctggtgtccctgtggttcctgctgcagctggtggaagtggctcctgggtttgctt ctggcctggttgcttctccttggattactttttggactcattgctctggcggaggaagtg agaaagctgaaatctcgtgtggaaaacctggaaaaaatcaatggtggtctcctggcaatg aaccaagggaattcaaaaatagaaaaggatgtttcaagagtagactatcttcatggtatt tcaccctcctcaaccttcccttatgaaaatgaagagtcagtttggttgatggtgaagaac agactgaacaaggaagtagaacgaggctacttccgaggggagagaggagaacctggtcag aaaggtgacatgggtcccagaggtgagtctggagagcgaggacttcctggtgtcccaggn nnnnnnnnnnnnnnnnngcaccaaggaccagaaggaccaaaaggacagaaaggcagcatg ggtgatcctggcatggaaggtcccatgggacaaagaggtcgagaaggactaccagggcct cgaggggagcctggaccccctggatttggagaaaaaggagacagaggtgttgttggtgag ccaggtcctccagggccacccggtcccccaggttctgccggccttaaaggtctaatgggt tctccaggcccacagggtcctccgggtcctcctggcctacaaggatttagaggagaagca ggtctcccaggtgctaaaggtgagaaaggagccagtggagcccctggacccaaaggagat cagggtgagaagggttctcgtggaatgacaggtgaacaaggttcaagaggaatgcctggt cctccaggagagccaggggctaaaggacctgtaggacaagctggccgtgatggacagcca ggtgataaaggtgaaccaggtcttatgggtatgccaggagcccgaggccctccaggaccc tctggagatgcaggacagccaggtctcacaggacctcaaggaccgccaggacttccaggc aacccaggccgcccaggggctaaaggagaacctggagctccaggaaaagtcataagtgct gagggttcgtcaactattgctctgccaggcccaccaggtcccccaggcccagccggcccc actggacccccaggtgttccaggtcctgttggaccagctggtctccctggacagcaaggt ccacggggtgagaagggatccccaggtgaagctgtgatagaaactatcaaaacagaagtc tcatcattagcatctcaaatgatggcagatttacaagggcgagcaggaccaccaggtccc cctggaccaccaggtgaatctgtgcagggaccccctggacctcgtggccctccaggattg ccaggacctccaggcccaccaggaagaccagcatcttccatgtctacctcagaagcattc ttcacaggcccaccaggtccaccaggcccaccaggcccgaagggagaccaaggcgaacga ggtccacgaggattgacaggagaaccgggtgatcctggcctttcagcattctcctcccat ggtgacagagtcaccattcagggacctccaggagttccaggcccgccaggcccacctgga cccaaaggtgatgcaggtgtcccaggcgcccctggcatcccaggagcatctcgaggtgga tccagacaacttcagggacccccaggacctcctgggccacccggtcctcctggcccaggt ggaagttcatctcaagagattcaacagtatgtcactgactacctgaagagtgacaatgta aggcactatttgaccggtgcccaaggcccaccaggccctccaggcccacctggagtcatc accactgcggatgggatgaacttggactacgcagagctggctacccgtgttatgagctat atgacaagctcttcagatcgctatcagtcatttgccagttcggtatcaactacatccttt ttgtaccaagaacttctggacttgctgcagagagaagaaattcgtcagtatctgattgga cctcagggcccaccgggacctcctggaccagggggagatggcatgtctctgtcactggat tatgatgagctgaccagacggtttatcagctacttgacaagttctgggatgagcatcggg ctccctggaccacctgggcctccagggacacctggtatatcttacagtgacctgacagca tacctgcgaaactctgaattcagtggtcttgttgggccccctggtcctgcagggccccca ggacctccagggatccccggatcacctggcacctctctggaggacgtctctgcttaccta caaagtgtgggatattcctccttctctggagtccggggtccacctggccctcctggccct ccaggaccaccaggcttctcaggaactggcctcctgtcctatgccgacatcacccacagt gacgagttcaggagcgagctgatccagtacctgaaaagtgatgaagttcgaagctatatc tcagggccacctgggccccctgggccacggggaccaccgggacccaaaggagatagtggc ttggtggctggggctatgtcttcatcatacgaagggttacggacttccgaacggatgcat ggaggatcccttggtgctgagggatcccatggaggatcactgggcacaggcagctcatat ggcggctccatgagcagcatgtcatcttacagtgcctcaaggggcagcgatgcctccatg ggcagtgatgggtctttcgatgggttgctgacagaggaggaaacacacaggagatcatcc ggttcaagtagatcctacagtaactccttcgctggttccctggattacaacgagctggca ctccgtgtgtcagagagcctacagagccaaggtattctccaggacctgatgtcttacact gcacaaggacctgcaggtcccccaggccctcctggtccccctggcatcagcagggtcttt gcaacctatggcaatgtcactgcggacctcatggacttctttagaacatatggtaccatc caggggccacctggtgaaaagggagagaggggttatcctggacccaaaggtgaccctgga ccgatgggcccgccaggacgccacgggcacaggggaccaaaaggagagaaaggagagaaa ggtgaacaagtgtatgttggcagaagaaaaagaagtgttggagtttaa

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