Charadrius vociferus (killdeer): 104283403
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Entry
104283403 CDS
T08577
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104283403 (TRUB1)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104283403 (TRUB1)
Transfer RNA biogenesis [BR:
cvf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104283403 (TRUB1)
Prokaryotic type
104283403 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104283403
NCBI-ProteinID:
XP_009879875
LinkDB
All DBs
Position
Unknown
AA seq
198 aa
AA seq
DB search
MLRTMLAGSKKYTAIGLLGKATDTLDATGKVTEEKPYDQITKGDLEKVLQKFTGDIMQVP
PLYSALKKDGERLSTLMKRGEAVEAKPARPVTVYSLSLQQFQPPLFTLDVECGGGFYVRS
LVSDIGKELSTCATMQELTRTKHGPFTLEEHALYEDKWTIDEIARSLEHCTSLLPGEPSH
KKLKTEHPGETAVSCEDK
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaactatgttggcaggttccaagaagtacactgccattggactactgggcaaa
gctactgatacattagatgctacaggaaaagtaactgaagaaaaaccttatgaccagata
acaaaaggagatcttgaaaaggtgctgcagaagttcacaggggacataatgcaggttcct
ccactctattctgctttgaagaaggatggagaaaggctatcaaccctgatgaagagagga
gaagcagtcgaagcaaagcctgctcggccagtaacagtgtacagcctctctctccaacag
ttccagccaccacttttcacactggatgttgaatgtggtggtggcttttatgtcaggagc
ctggtcagtgacattggcaaagaactttctacctgtgccactatgcaagagctgacccga
accaaacatgggccatttacactagaggagcatgccctttacgaagacaaatggacaatt
gatgaaattgcacgatccttagagcattgcacgtctcttctcccgggagagccatcccat
aaaaaattgaagacagagcatcctggtgaaacggctgtgagctgtgaagataagtga
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