Charadrius vociferus (killdeer): 104283455
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Entry
104283455 CDS
T08577
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04110
Cell cycle
cvf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104283455 (SMC3)
04114 Oocyte meiosis
104283455 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104283455 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cvf00535
]
104283455 (SMC3)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104283455 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
104283455 (SMC3)
Proteoglycans [BR:
cvf00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104283455 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
Baculo_PEP_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
104283455
NCBI-ProteinID:
XP_009879930
LinkDB
All DBs
Position
Unknown
AA seq
1250 aa
AA seq
DB search
MAQKWCKEVEEEEGHGSSPAWALALGNLNVGTRSWGGEVIIQGFRSYRDQTIVDPFSSKH
NVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQRLALLHEGTGPRVISAFVEIIFDNSDN
RLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKNDVMNLLESAGFSRSNPYYIVKQGKINQM
ATAPDSQRLKLLREVAGTRVYDERKEESISLMKETEGKREKINELLKYIEERLHTLEEEK
EELAQYQKWDKMRRALEYTIYNQELNETRAKLDELSAKRETSGEKSRQLRDAQQDARDKM
EEIERQVRELKTKISAMKEEKEQLSAERQEQIKQRTKLELKAKDLQDELAGNSEQRKRLL
KERQKLLEKIEEKQKELAETEPKFNSVKEKEERGIARLAQATQERTDLYAKQGRGSQFTS
KEERDKWIKKELKSLDQAINDKKRQIAAIHKDLEDTEANKEKNLEQYSKLDQDLNEVKAR
VEELDRKYYEVKNKKDELQSERNYLWREENAEQQALAAKREDLEKKQQLLRAATGKAILN
GIDSINKVLEHFRRKGINQHVLNGYHGIVMNNFECEPAFYTCVEVTAGNRLFYHIVDSDE
VSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAYPETNDAIPMISKLRYNPRFDKAFKHVF
GKTLICRSMEVSTQLARAFTMDCITLEGDQVSHRGALTGGYYDTRKSRLELQKDVRKAEE
ELGELEAKLNENLRRNIENINNEIDQLMNQMQQIETQQRKFKASRDSILSEMKMLKEKRQ
QSEKTFMPKQRSLQSLEASLHAMESTRESLKAELGTDLLSQLSLEDQKRVDALNDEIRQL
QQENRQLLNERIKLEGIITRVETYLNENLRKRLDQVEQELNELRETEGGTVLTATTSELE
AINKRVKDTLARSDDLDNSIDKTEAGIKELQKSMERWKNMEKEHMDAINHDTKELEKMTN
RQGMLLKKKEECMKKIRELGSLPQEAFEKYQTLSLKQLFRKLEQCNTELKKYSHVNKKAL
DQFVNFSEQKEKLIKRQEELDRGYKSIMELMNVLELRKYEAIQLTFKQVSKNFSEVFQKL
VPGGKATLVMKKGDVEGSQSQDEGEGSTESERGSGSQSSVPSVDQFTGVGIRVSFTGKQG
EMREMQQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAVSDMIMELAEH
AQFITTTFRPELLESADKFYGVKFRNKVSHIDVITAEMAKDFVEDDTTHG
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcccagaagtggtgtaaggaggtagaagaggaagagggacatggcagcagccctgcc
tgggctctggctttgggaaacctgaacgtgggaacccgcagctggggaggtgaggtaatc
attcagggctttcgaagctacagggaccaaaccattgtggacccatttagctcaaaacac
aatgtcatcgtgggaagaaatggatctggaaaaagcaactttttttatgcaattcagttt
gtcctcagtgatgagtttagtcatcttcgcccggagcagagactggctttgttgcatgaa
ggtacaggtcctcgtgttatatcagcgtttgtggaaattatttttgacaattcagacaac
agattaccgattgataaagaggaagtctcacttcgcagagtcattggagccaagaaggac
caatatttcttagacaagaaaatggtgacgaaaaatgatgtaatgaatcttcttgagagt
gctggattttctcgcagtaatccctactatattgtcaaacaaggaaagatcaaccagatg
gccacagctcctgactctcaaagactgaagttactaagagaagtagctggtaccagagtg
tacgatgaacgtaaagaagagagtatttcactaatgaaggaaacagagggcaagcgagag
aagatcaatgagttgttgaaatacattgaagagcgactgcataccctagaagaggagaaa
gaggagctggctcagtaccagaaatgggataaaatgaggagagcattagagtacaccatt
tataatcaggagcttaatgaaacccgagctaagcttgatgagctttctgccaaacgagag
acaagtggagagaaatccaggcagctgagagatgcacagcaagatgctagagataaaatg
gaggaaatagaacggcaggttcgagaactgaagacaaagatttcagcaatgaaagaagag
aaggaacaacttagtgctgaaagacaggagcagattaaacagaggactaaattagagctg
aaagctaaagaccttcaggatgaattggctggcaacagtgaacaaaggaaaagactgtta
aaagagaggcaaaaacttcttgagaagattgaggagaagcagaaagaattagcagaaacg
gagccgaaattcaacagtgtaaaagaaaaagaggagaggggaattgctagacttgcacag
gctacacaagaaagaacagatctttatgcaaagcaaggtcgaggaagccagtttacttcc
aaagaagaaagggataagtggataaagaaagaactgaagtctttagatcaagccatcaat
gacaagaagcggcagattgcagctatacacaaggatttagaggatacagaagcaaacaag
gagaaaaatttggaacagtacagtaaactggaccaggatcttaatgaagtgaaggctcgt
gttgaagaactggacagaaagtactatgaagtgaaaaataaaaaggatgaactacagagc
gaaagaaattatctatggagagaagagaacgcagaacaacaagctcttgctgcaaaacgg
gaggatttggaaaagaaacagcagcttctcagagcagcaacaggaaaagccattttgaat
ggtatagacagcataaacaaggttttggagcacttccgtcgaaaaggcataaaccagcat
gttctaaatggctatcatggcattgtgatgaataactttgagtgcgaaccagctttctac
acctgtgttgaagttactgcagggaacaggttgttttatcacattgtggattctgatgag
gtcagtacaaagatcctaatggaatttaacaaaatgaaccttcctggagaagttactttc
ctccctctgaacaagctggatgttagagatactgcttatcctgagactaatgatgctatt
cctatgatcagtaaactgagatacaatccaagatttgacaaagctttcaaacatgttttt
ggaaagactctaatttgtcgtagcatggaagtgtctacccagctggccagagctttcact
atggattgtattactctagaaggtgatcaagtcagccatcgaggtgctttgactggaggt
tattatgacacaaggaagtctcgtcttgaattgcaaaaagatgttagaaaggcagaagaa
gaacttggtgaacttgaagcaaaactcaatgaaaacttacgcagaaacattgaaaatatt
aataatgagattgaccagctaatgaaccaaatgcagcaaattgaaacacagcagagaaag
ttcaaagcctctcgagacagtattttgtcagagatgaaaatgctgaaggagaaaaggcag
cagtctgaaaagacatttatgcctaagcaacgcagtttgcagagcttggaggcaagttta
catgctatggagtcaacaagagaatcattaaaagcagaactggggactgatttattatct
cagctcagtcttgaagatcagaaacgtgtggatgctcttaatgatgaaattcgacaacta
cagcaagaaaacagacagcttttgaatgagaggattaaactagaaggcattatcacaaga
gttgaaacatatctcaatgagaatttgagaaaacgcttagaccaagtggaacaagaactg
aatgagcttcgagaaacagaaggtggcacagttcttactgccacaacatcagaacttgag
gctatcaacaaacgagtgaaagatacactggcacggtcagatgatctggataattctatt
gacaaaacagaagcaggaattaaagagcttcaaaagagcatggaacgctggaagaacatg
gaaaaagagcatatggatgctattaaccatgatacaaaagaacttgaaaaaatgactaac
aggcaaggcatgctcctcaagaagaaagaggaatgcatgaagaaaatacgagagttgggt
tcacttccacaggaggcttttgaaaagtatcagaccttaagtttaaagcagttattccgc
aaactggagcagtgcaatacagaactgaagaaatacagtcatgttaacaaaaaagcttta
gatcagtttgtgaatttctcagagcagaaggaaaaattaataaaaagacaagaggaattg
gacaggggctacaaatccatcatggagctgatgaatgtccttgagctcaggaaatacgag
gccattcagctgactttcaaacaggtgtcaaaaaacttcagtgaagtattccagaagtta
gtccctggtggcaaggccaccttagtgatgaagaaaggagatgtggaaggcagtcagtcc
caggatgaaggtgaaggcagcactgagagtgaaaggggatctggatctcagagcagcgtt
ccatctgtagaccagttcactggagttggcataagggtatcgttcacagggaagcagggt
gaaatgagagaaatgcagcaactttcaggtggacagaaatccttagtggcactagccctg
atatttgctatccagaaatgtgatccagctccattttacttgttcgatgaaatcgaccaa
gccttggatgctcagcacagaaaagctgtgtcagatatgattatggaactagctgaacat
gctcagtttattacaacaacttttaggcctgaactgcttgagtcagccgacaaattctat
ggtgtaaaattcagaaacaaggttagtcatattgatgtgatcacagcagaaatggccaaa
gactttgtagaagatgacaccacgcatggttaa
DBGET
integrated database retrieval system
