Charadrius vociferus (killdeer): 104283674
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Entry
104283674 CDS
T08577
Symbol
DDX17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvf03041
]
104283674 (DDX17)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104283674 (DDX17)
Spliceosome [BR:
cvf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104283674 (DDX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104283674
NCBI-ProteinID:
XP_009880187
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
MDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG
DGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATP
GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE
VRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTI
IFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGL
DVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQ
AINPKLMQLVDHRGGGGGGGGGRSRYRTSSSVNNPNLMYQEECDRRLRGVKEGRRDSGGF
RDRERGDSYANGANKTYGSAYGSPNSAFGAAQSQYGYTQGSYGAAACGTSGYGTAEYSAS
GYGASTTAATAGRTSQSTTQQQYAGMVGPLPPHANETTRLLVTSVDLLHLKEPFLSLLSH
CGVSLMQVRLRIHQSNPSSPAKMAPGPHY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatgccttgatggaccagaacttcacagaacccactccaattcagtgccaaggcttt
ccactagccctcagtggtcgtgatatggtgggcattgcgcagactggctctgggaagaca
ctagcatacttgttgcctgcaattgttcacatcaaccaccagccatatttggagagaggg
gatggcccaatttgtctggttctagcacctactagagagttggctcagcaagtgcagcag
gtggctgatgattatggcaaatgttcaagactgaagagtacctgcatatatggaggagca
cccaaaggtccccaaatcagagatctagaaagaggtgtggagatctgcattgctacacca
ggtcgcttgattgatttccttgaggcaggaaagaccaaccttcgccggtgtacgtacctg
gtgctggatgaagcagacaggatgttggacatgggatttgaaccccaaattcgtaaaatt
gttgaccagatcaggcctgacagacagactctgatgtggagtgccacctggccaaaagaa
gtgcgccagcttgccgaggacttcctgcaggactatgttcagatcaatgtgggaaacttg
gagctgagtgccaaccacaatatcctgcagatagtggatgtatgcatggaaagcgagaaa
gaccataaactgatccaactgatggaagaaatcatggcagagaaagaaaacaagactatc
atctttgtggagacaaagaggcgatgtgatgatctcactcgaaggatgcgcagagatggt
tggccagctatgtgtatccatggagacaagagtcagccagaaagagattgggtgcttaat
gagtttcgttctggaaaggctcctatcctcattgctaccgacgttgcatctcgtgggcta
gatgtggaagacgttaaatttgtgataaactacgactatccgaacagctctgaagattac
gtgcaccgtattggccgtaccgcacgtagtaccaacaaaggtactgcctacaccttcttc
acaccaggaaacctgaaacaagccagggagcttatcaaagtgttggaagaagccaatcaa
gccatcaatccaaaactgatgcagcttgtggaccacagaggaggaggaggtggtggtgga
ggaggtcgttctcgttaccgaacgagcagttcagtaaacaaccctaacctgatgtaccag
gaggagtgtgacaggaggctccggggagtgaaagagggccggagagactcgggtggcttc
agagaccgtgagcgtggtgacagttatgccaacggagccaacaagacctatggcagtgcc
tacgggagcccaaattctgcttttggggcagcacagagccagtatggttacactcaaggg
agctatggagcagctgcctgtggcacgagtggctatggcactgcagagtacagtgctagt
ggctatggtgccagcaccacagctgccaccgctgggagaacctcacagagcactacccaa
cagcagtatgcagggatggtgggccccctcccccctcacgcaaatgagaccactcgcctg
ctggtgaccagtgtagacctcttgcatttaaaggaaccttttctttctcttctttcccat
tgtggtgtctctctcatgcaggttagacttagaattcaccagtcaaatccctcgagccca
gcaaaaatggcccccggtccacattactga
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