Charadrius vociferus (killdeer): 104283886
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Entry
104283886 CDS
T08577
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104283886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cvf03036
]
104283886
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104283886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
LTN1_E3_ligase_6th
Motif
Other DBs
NCBI-GeneID:
104283886
NCBI-ProteinID:
XP_009880423
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MIDEPNAAGNLPSQKENAVCDETVPESAVQNGSCVRNGNLKTPREKRKVREQCENVRRNS
SSSRRVSQLQNGEVVEAVTLFEVVSMGKQAMQSVVDDWVEAYKQDRNVALLDLINFFIQC
SGCQGMVTAEMFQSLQKKDVMQKMTETFDEETGLQYKKFVAYPWILTVTWPVDMDNEDYP
LIRTGPYWKKFKANFCEFIAVLVQQCQCSILYDSYLMDTIISLLTGLADSMVRAFRHTST
LAAMKLLTAVVSVHLNLDVNKHNAQRLYEVEKKRISGKRTNYRLDQLERKRKEYEHKLLE
IQNMMNAIFKGTFLNRYRDVIPEIRATCIEEIGSWIKTYPDAFLNDSYLKYIGWMLYDKQ
AEVRLKCLLGLQGIYSRKELVSRMDLFTSRFKDRIVSMPLDKDHEVAVQAMKLLMLMSQN
CEDVLSAEDCETLYQFVYTTHRPLAVAAGEFLYTRLLSHEGDEEVQPKGGGKFGASTGQL
KRLIHFFLESELHKHVAYLIDSLWDWAGKFLKDWECMTTLLLKNAEEGGEELSDAHESAL
IEIILATVREAAEGHPPVGRGAAKKILSVKEKKIQLEDCTKITEHFIMVLPQLLAKYSTD
AQKVANLLQIPQYYDLDVCSTGHLEKHLDALLREVKDIVTKHSDISVLEASSRTYYVLCS
EEIAIYSQVDRARTQLIDELMGQLNQLLDDFWQREEGFCTDAGEISRMHSALRRVAAFHN
AHDLTKWNLYDKTLRLLVFEMEHGSLPVLVILPALQCTYFSLLWKLAAVSENPPKTLFAL
GRELRHFSQICMCFLHHKEEDVREKAFMILCDWLLILSHQDSNNNEEAVGLLDYLPSTSL
QEKLLLFIQEHVFVEEEEESKDLTEEEERKNESCKLDDLHKKRSLLAAYCKLVVYNVVEM
TAAAEIYKHYVKTYNDFGDIIKETLSRTRHNNKIQSAKTLILCLQQLFQRHVESQDSSSS
ADFSSASFTNMKELARRFSLTFGWDQVKSRESVAMIHKEGIEFAFQGATGVDGKCLPPNL
TFLAIISEFSNKLLKPDKRLVYAYLQRYIAEPLPCRGDEWQPLIWYRNSLLANEDEESSA
LGSSGEWSPVGTSKVSSFKRKLSNGSLPETSQTEAASKAPDLQRASQLASAAGKSRKRLK
SREVHLQEHLPFLCPGGLRRRYCKDEIKTEDVSEEGQAEDVTEDVDVDVVGADQIERLRM
CLITGQPRALAGVSLVSCPFPVKADGEIKLSPNQVGI
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgatagacgagcccaatgcagctggtaaccttcccagccaaaaagagaatgctgtctgt
gatgagactgtgcctgagtctgctgtgcagaatggcagctgtgtgagaaatggcaacctg
aaaacaccaagagagaaacggaaggtccgagaacagtgtgaaaacgtgaggagaaattct
tccagtagcagaagagtgagccagctgcagaatggcgaagtggttgaggcagttacattg
tttgaagtggttagcatggggaagcaggccatgcagtctgtagtagatgactgggttgaa
gcttataaacaagacaggaatgtggcacttttagatctgatcaacttcttcattcagtgc
tcaggctgtcaaggcatggtaacagcagagatgtttcaaagtttgcagaagaaagatgtc
atgcaaaaaatgacagagacctttgatgaggagactgggttgcagtacaagaaattcgtg
gcatatccttggatcctgacggttacttggccagtggatatggacaatgaagactacccg
ctgatcagaacaggaccctattggaaaaagttcaaggccaatttctgtgaatttattgca
gtacttgtccaacagtgccagtgcagcattctgtatgatagctacttgatggacactatc
atctcgctgcttacaggcttagcagactccatggtcagagcatttagacatacaagcact
ttggcagcaatgaaacttctgacagcagttgtaagcgtacatctgaaccttgatgtcaac
aagcacaatgctcaaagattatatgaggtggagaagaagaggataagtggcaagaggacc
aattatagacttgaccaactagagagaaaaaggaaagagtatgagcataagctcctagag
atacagaacatgatgaacgctattttcaaagggacatttctaaaccgttaccgtgatgtg
atccccgagatccgagccacttgcattgaagaaattggtagctggattaaaacataccca
gatgcttttttaaatgatagctacttaaaatacattgggtggatgctgtatgataagcaa
gctgaagtgcggttgaagtgtcttctgggactgcagggaatttatagcagaaaagaactt
gtttccaggatggatctctttactagcagattcaaggatcgaattgtgtccatgcctctg
gacaaggaccatgaagtagcagttcaagccatgaaactcttgatgcttatgtcacagaac
tgtgaggatgtgttatcagctgaagactgtgaaacgttataccaatttgtttataccaca
caccgtccacttgcggtagcagctggggaattcctttatacaaggctgcttagtcatgag
ggagatgaagaagttcagcccaaaggaggagggaagtttggggcgagtactggccagttg
aaaagactaatacattttttcctggagagtgagctacacaaacatgttgcatacctcata
gacagcttgtgggactgggcaggcaaattcctgaaggactgggagtgcatgaccactctt
ctactaaaaaatgctgaagaaggtggagaagaactgagtgatgcccatgaaagtgctctc
attgaaatcatcctcgcaacggttagagaagcagctgaaggtcatccgccagtgggcaga
ggtgcagccaaaaaaattctgtcagtaaaagagaagaaaatacaattggaagattgtacc
aaaattactgaacactttattatggtgcttcctcagctcttggcaaagtattcaacagat
gcacaaaaagtggcaaatcttctgcagattcctcagtattatgatttagacgtttgcagt
acaggacatctagagaagcatttggatgctttgctgagagaggtaaaagacattgtgacg
aaacactctgacatatctgtccttgaggcttcctccaggacttactatgtcctctgcagt
gaagaaattgccatctacagccaggtggatcgtgcccgaactcaactgatagatgagttg
atgggacagcttaaccagctactagatgacttctggcaaagggaagaaggattttgtacg
gatgcaggagaaatttcccggatgcactctgctttgagaagagtagcagcttttcataat
gcccatgatctcaccaagtggaatctgtatgataagactttaaggttgctggtgtttgaa
atggaacacgggagtttgcctgttctggtgatcctgccagctctccagtgcacgtatttt
tctctcctgtggaaactagctgcagtttcagaaaatcctcctaagactctttttgcacta
ggaagagagctgagacatttcagtcagatttgcatgtgcttcctccaccataaggaagaa
gatgtaagagaaaaggcattcatgattctctgtgactggttgctgattttgagtcatcag
gattcaaataataacgaagaagcagtcggacttctagattatcttcctagcacatcactt
caggaaaaactccttttgttcatccaggaacatgttttcgtggaggaagaagaggaaagc
aaagacctgacagaagaggaggagagaaagaacgaaagttgcaaacttgacgacttgcac
aaaaagcggagtcttcttgcagcatattgcaagttagtagtgtataatgtggtagagatg
actgcggctgctgagatctataagcattatgtcaagacctacaatgattttggagacata
attaaagaaacgttaagcaggaccaggcacaataacaaaattcagagtgccaagacactg
attctctgtctgcagcagctgtttcagagacacgtagaaagccaagacagcagtagcagt
gcggacttctcctctgcttccttcacaaatatgaaagaacttgctcgtcgcttttcacta
acgtttggctgggaccaggtgaaatctagagaatctgtagctatgatacacaaggaaggg
attgaatttgcttttcaaggagctactggagtagatggaaaatgcttgcctcctaacttg
acctttctggcaatcatcagtgaattttccaacaagctgctaaagcctgacaaaagacta
gtgtacgcttacttacagaggtatatagcagaaccactgccttgcagaggagacgaatgg
cagccgctgatttggtacagaaactctttactggcaaacgaagacgaggagagctctgcc
ctcggcagttcaggagagtggtcccctgtgggcacgtctaaggtgtcttcttttaaaagg
aaattgtctaatgggtctttgcctgaaaccagccagactgaagcagcaagcaaagctccg
gacctgcagcgtgcttcgcagcttgcctctgcagcagggaaaagcagaaagaggctaaaa
tctcgagaggtgcacttgcaggaacatttgccattcctttgtccaggagggctgcggaga
agatactgcaaagatgagattaagacagaagatgtctcagaagagggtcaagcagaagac
gtcactgaagatgttgatgttgatgtggttggtgcagaccagatcgaaagactcagaatg
tgtctgatcactggtcagcccagggctcttgctggagtgtccctggtttcctgtcctttt
ccagtcaaggctgatggggaaattaaattgtccccaaaccaggtggggatttga
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