Charadrius vociferus (killdeer): 104284323
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Entry
104284323 CDS
T08577
Symbol
FGD6
Name
(RefSeq) LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 6
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cvf04990
]
104284323 (FGD6)
Domain-containing proteins not elsewhere classified [BR:
cvf04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
104284323 (FGD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
PH_11
RHG20_PH
FYVE_2
PH_9
EF-hand_FSTL1
PH_20
Motif
Other DBs
NCBI-GeneID:
104284323
NCBI-ProteinID:
XP_009880950
LinkDB
All DBs
Position
Unknown
AA seq
1527 aa
AA seq
DB search
MTDNRGNPTPGVEFSPRLTSRGCESLSVAKLRVCFEGVPAPRSGSDELEPSPRECLKNYL
CHRVYLFANIIAARAAILSVKXFCGLIMTNXLCFPSFLEIKKPPVAPKPKFVVGHKATPP
PVAPKPDVVLSGVIQAARKTKPAIAPKPKVLKSSSIPEVKPLSSTQKSTKSFEEHRGDSS
RTLDHLNYKNEASEESTDNRAYILPVSSCKFECLHKLGNGENTCKTQIIFEHFGNLENIK
VGEKTALALGDSPSEKLASRNQVVLKASILEEKLKDVLTHSVFPNSSPVRHRYADKLGKG
DGSSSKNDVKIEFVELVQSSSSSDVAKGNQQNTDGKLTADEFQMSEICPSLTENNHSCSC
PLDQEILENENSSSNSMFSGEMGKKADADKTSSEISSVLISKVLPIPKPRKARAACLVRQ
DGIDTTGEVTKEPSNSEKDSFGLAEQSFKKPAKINILGQSVCYNNNTEVLHPEKCEITQS
NADRMHQVKELAAGESTSQNLLPQLSHKASDLVESVEFSLDADHNLINSIDEMTDDASML
DAVDGRTNFVRCDTLSMSLPKQLKLTGNQHSSASNSLHVSSQKVEDKEVKIKDESSPKIV
PKKPQRHSLPAAGLLKKAASAELVEKSSYTSSEDKSNSVLEGCHFTCPPAKEQGALSSCD
IPKRTSEKPVWKLPHPILPFSGNSESLKTANIATSFNHLTVVTKPRAKSLSSVDVGRTDK
PCKDHQKKNSLKKFLNMKLSVCLMKSDFQKFLSKGSQSMDSAIANLSTGEGYGSGSNRNI
ASVGSERKAKSAKVLSVEISSPALQKKRQRNRSQPEMRSNQRLESLDGHVLLGDNLSQMH
LNSVTSTCAPEYENVRHYEEIPEYENLPFAMGAGRNLCFECDNSSGVEDQSPGFYEVEEP
CEATSRRLRLGRSLEDHHNHPNVVMGDLQSDDEDIMNSSDEDDDTNSDSSKGEPDPQEDK
QAAGKKTKVYHIAKEIMSSEKVFVDVLKLLHIDFRDAVAHASRQLGKPVIEDRILNQILY
YLPQLYELNRDLLRELEERLSHWLEHQRIADIFVKKGPYLKMYSTYIKEFDKNVALLDEQ
CKKNAGFASVVKDFEMSPRCASLALKHYLLKPVQRIPQYRLLLTDYLKNLLEESADYRDT
QDALAVVIEVANHANDIMKQGDNFQKLMQIQYSLNGHHEIVQPGRVFLKEGTLMKLSRKV
MQPRMFFLFNDALLYTTPVQSGMYKLNNMLSLAGMKVKKPTQEAYQNELNIESVERSFIL
SASSATERDEWLEAISKSIEEYTKKRITFNPSKSLEEAGPEKQEEDSPLGSKAPIWIPDT
RATMCMICTSEFTLTWRRHHCRACGKIVCQACSSNKHGLDYMKNQPARVCDHCFRELQKQ
DNQCTPKTGSPVNHKSPSSALSTVLHSIPSGRKQKKIPAALKEVSANTEDSTMSGYLHRS
KGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVSEVKDENSESRVFHLLHKN
TLFYIFKADDPHSAQKWIEAFQEGTIL
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaccgggggaacccgacaccgggggttgagttctcgccccgtttgacttcg
cggggctgcgaaagtttgtcggtggcgaagctccgggtgtgcttcgagggtgttcctgcc
ccccggtccggctccgacgagctggagccctcacccagagaatgtctcaaaaattatctc
tgccatcgggtttacctctttgctaatataattgcagcgagggcagctattctaagtgtg
aagtagttctgtgggctgatcatgactaatngtctttgttttccatccttcctagaaatt
aagaagccaccggtggcccccaaaccaaaatttgtggtaggacacaaggcgacgcctcca
cctgttgcaccaaagcctgatgttgtactttctggtgttatacaagcagcaaggaaaacc
aagccagcaattgcaccgaaaccaaaggttctcaagagctcatccattccagaagttaaa
cctctgtcgtctacacaaaaaagcacaaaaagctttgaagagcacaggggagattcttct
cgaacgctggaccacttgaactataaaaatgaagcctcggaagagagtactgataacaga
gcatatattctaccagtgtcatcttgcaaatttgaatgccttcataagcttggaaatggg
gagaacacctgtaaaactcagatcattttcgagcactttggaaacttagagaacatcaaa
gttggtgaaaaaactgcactagctctgggggacagtcccagtgaaaaactggcaagtaga
aatcaggtggttttgaaagccagcattctggaagagaaacttaaggacgttctaactcac
agtgtgtttccgaacagtagtcctgtgaggcacaggtatgcagacaaacttggcaaaggg
gatggcagcagttccaagaacgatgttaaaatagagtttgtggaacttgtacagtcttcg
tcatcttctgacgtagctaaagggaatcagcaaaatactgacggtaagctcactgctgat
gagtttcagatgtctgaaatttgtcctagtttgactgaaaataaccacagttgctcgtgc
ccattggaccaggaaatcctggaaaatgaaaattcaagtagcaatagtatgttttcaggt
gaaatgggtaagaaagcagatgctgataaaacctcctctgaaatatcttcagtcctgatc
tcaaaagtgcttcctatccctaagccaagaaaggcacgtgctgcatgtcttgttcgtcag
gatggcatagacaccacaggagaagtaacaaaggaaccatctaattcagagaaggattcc
tttgggcttgcggaacaaagctttaaaaagccagcaaaaattaatatccttggtcaaagt
gtttgttataacaataatacagaagtgcttcatcctgaaaaatgtgagataactcaaagc
aatgcagacagaatgcatcaggtgaaggaacttgctgcaggagagtcaacttcgcaaaat
cttttgcctcagttgtcacacaaagcttctgatttggtggaaagtgttgaattttcttta
gatgcagaccataacttaattaactccatagatgagatgacagatgatgccagtatgcta
gatgctgtggacggaaggactaactttgtcaggtgtgatactttgtccatgagtttgcca
aagcaactcaaattaactggcaatcagcactcctctgcttccaatagcctccatgtttcc
tcacaaaaagtggaagataaagaagttaaaataaaggatgaaagttctccaaaaattgtt
cctaagaaaccacagaggcacagcctaccagctgctggcctgctgaaaaaagctgcatca
gcagagcttgtggagaaaagttcttacacctccagtgaggataaatcgaacagtgttctg
gaaggatgccacttcacatgtccaccagccaaggagcaaggtgcgctgtcgtcctgtgac
atacccaaacgtacttctgagaaacccgtctggaagttacctcatcctattcttccattt
tcaggaaattcagaatcattaaaaactgcgaacattgctaccagcttcaaccacttgact
gttgtcacaaagcctagggccaaatctctctcttctgtggacgtgggcaggacagacaag
ccttgcaaagaccaccagaagaaaaatagcttgaaaaagtttctcaacatgaaactgtca
gtttgcttaatgaaaagcgacttccaaaaatttctgtctaaaggcagccagtcaatggat
agtgctattgccaacctttccactggggaagggtatggaagtggtagcaatcggaatata
gcatctgtaggtagtgaaaggaaagctaaatctgccaaggtgctttctgtagaaataagt
agtccagcattacagaagaagaggcagagaaacagaagtcaaccggagatgcgaagtaac
caaaggctggagtctttagatgggcatgtactattgggagacaacttgtcacaaatgcat
ttgaattctgtaaccagcacttgtgctccagagtatgagaacgtgcgtcactatgaggaa
atacccgagtatgagaacttgccttttgctatgggtgctgggagaaatctttgtttcgaa
tgtgacaattccagcggtgtggaagaccagagccctggcttctatgaggttgaggagcct
tgtgaagctacaagcaggcgcttgagacttggcaggtccttagaagaccaccataatcat
cctaatgtggtaatgggagatcttcagtcagatgatgaagatatcatgaacagttctgat
gaagatgatgacacaaattctgattccagcaaaggggagcctgatcctcaagaagataaa
caggcagctggaaagaaaacaaaggtttaccatattgccaaggagatcatgagctcagag
aaagtgtttgtggatgtgctaaagctcttacacattgatttccgggacgctgtggcacat
gcctctaggcagcttggaaagccagtgattgaggacagaatcctgaatcagatcctgtac
tacctacctcagctgtacgaactcaaccgggacctcctgagggaactggaagaacgatta
tctcactggctcgaacatcaaagaattgctgatatatttgttaaaaagggtccctactta
aagatgtattcaacttacatcaaagaatttgataaaaatgttgcactattagatgaacag
tgtaagaagaatgcaggttttgcttcagtagtcaaagacttcgagatgagcccccgctgt
gctagtctggccctcaagcactatctgctcaagccagttcagaggattccccagtacagg
ctgctgttgacagattatttaaagaatcttttagaagaatctgcagactatagggatact
caagatgctctagctgttgtcatagaagttgcaaaccatgccaatgacatcatgaagcag
ggagataactttcagaaactcatgcagattcagtacagtttaaatggacaccatgagatt
gtacagccgggaagggtctttctgaaagagggaacactgatgaagctgtcccggaaggtc
atgcagccacgaatgttttttctgttcaatgatgccttgttgtacactactccagttcag
tcagggatgtataaactcaacaacatgctgtcgttggctggaatgaaggttaaaaagcca
acccaggaagcatatcagaatgaactgaacattgaaagtgtggagagatccttcattctt
tcagcaagttctgctacagaaagagatgagtggttagaagctatctccaagtcaattgaa
gaatatacaaaaaagagaatcacatttaatcctagcaaaagtcttgaagaggcaggtcca
gagaaacaggaagaagacagtccgctgggatcaaaggctccgatctggatccctgatact
agagccactatgtgtatgatctgtacgagtgaattcacgttgacgtggagaaggcatcac
tgcagggcatgtggaaagattgtctgtcaagcttgttcatcaaataaacatggtttagac
tatatgaaaaaccagccagcgagagtatgtgatcattgcttcagggagctacaaaaacaa
gataaccagtgcactcctaagaccggatccccagtcaaccataaatctccatcaagtgcc
ttgtctacagtattacatagtattccctctggaagaaagcagaaaaaaattcctgcagcc
ctcaaagaagtttcagcaaatacagaagactctacaatgagtggctatctacacagatcg
aagggcagtaagaaaccatggaaacacctgtggtttgttataaaaaataaggtgctatac
acatatgctgctagtgaggatgtggcagcattggagagccagcctttacttggattcaca
gtcagtgaagtaaaagatgaaaactcagagtctagagtgttccatttactgcacaaaaac
actttattttacatattcaaagcagatgatccccattcagctcaaaagtggatagaagct
tttcaagaaggcaccattttatag
DBGET
integrated database retrieval system
