Charadrius vociferus (killdeer): 104284363
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Entry
104284363 CDS
T08577
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04142
Lysosome
cvf04144
Endocytosis
cvf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104284363 (CLTC)
04142 Lysosome
104284363 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
104284363 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cvf04131
]
104284363 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cvf04147
]
104284363 (CLTC)
Membrane trafficking [BR:
cvf04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
104284363 (CLTC)
Exosome [BR:
cvf04147
]
Exosomal proteins
Proteins found in most exosomes
104284363 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_PEP5_VPS11
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
104284363
NCBI-ProteinID:
XP_009880989
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMNDPSNPIRRPISADSAIMNPASKVIALKDAGKTLQI
FNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAG
CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNA
EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISDKH
DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAQHEATAGIIGVNRKGQVLSVCVE
EENIIPYITNVLQNPDLALRMAVRNNLAGAEELFARKFNALFAQGNYSEAAKVAANAPKG
ILRTPDTIRRFQSVPAQPGQTSPLLQYFGILLDQGQLNKYESLELCRPVLQQGRKQLLEK
WLKEDKLECSEELGDLVKSVDPTLALSVYLRANVPNKVIQCFAETGQVQKIVLYAKKVGY
TPDWIFLLRNVMRISPDQGQQFAQMLVQDEEPLADITQIVDVFMEYNLIQQCTAFLLDAL
KNNRPSEGPLQTRLLEMNLMHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHF
TDLYDIKRAVVHTHLLNPEWLVNYFGSLSVEDSLECLRAMLSANIRQNLQICVQVASKYH
EQLSTQSLIELFESFKSFEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRE
SNCYDPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPS
RLPVVIGGLLDVDCSEDVIKNLILVVRGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGC
EEPATHNALAKIYIDSNNNPERFLRENPYYDSRVVGKYCEKRDPHLACVAYERGQCDLEL
INVCNENSLFKSLSRYLVRRKDPELWASVLLESNPYRRPLIDQVVQTALSETQDPEEVSV
TVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNY
DAPDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQ
LAKAQLQKGMVKEAIDSYIKADDPSSYMEVVQAANASGNWEELVKYLQMARKKARESYVE
TELIFALAKTNRLAELEEFINGPNNAHIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLAST
LVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYY
QDRGYFEELITMLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLR
AAEQAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIITKVANVELYYKAVQF
YLEFKPLLLNDLLMVLSPRLDHTRAVTFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNL
FIIEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKK
DRLYKDAMQYASESKDTELAEELLQWFLQENKRECFGACLFTCYDLLRPDVVLETAWRHN
IMDFAMPYFIQVMKEYLTKVDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVP
PQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgacaaattcatctgcataagagagaaagtaggagaacaggctcaagtggtg
atcattgacatgaatgaccccagcaaccctattcgaagaccaatttcagctgatagtgct
atcatgaaccctgccagtaaagtcattgcattaaaagatgctgggaaaacgcttcaaata
tttaacattgaaatgaagagcaaaatgaaggctcatacgatgacagatgatgtcaccttt
tggaagtggatctctctgaatactgttgcccttgtgacggataatgcagtctaccattgg
agtatggagggggagtcccagcctgtgaaaatgtttgaccgtcattctagtcttgctggc
tgccagatcatcaactaccgtactgatgctaagcagaaatggctactgctaactggcata
tctgcacagcaaaatcgtgttgtgggagcaatgcagctgtattctgtagatagaaaagtg
tcacagccaattgagggacatgcagctagctttgcgcagttcaagatggaaggaaatgct
gaggaatccactctcttctgttttgcagtaagagggcaagctgggggtaagttgcacatc
attgaagttggcacaccacctactgggaatcagccatttccaaagaaagcagtggatgtc
ttctttcctcctgaagcacaaaatgacttccctgttgccatgcagatcagtgacaagcac
gatgtggtgtttctcataaccaaatatggctatatccacttgtatgacctggaaactggc
acctgtatctacatgaacagaatcagtggagagaccatatttgttactgcacagcatgaa
gcaacagctggaattattggagtaaacagaaagggacaagtgctctcagtgtgtgtggaa
gaagagaatattattccctatattacaaatgtgctgcagaatcctgacctagctttacga
atggctgtccgcaacaacctggcaggtgccgaggaactctttgccagaaaattcaatgca
ctctttgcacaaggaaactattcggaggcagcaaaagtggcagctaatgctccaaaggga
atcctgcgtactccagacaccatacgccggttccagagtgttccagctcagccaggacag
acttctcctttactccaatactttggcattctgcttgaccaagggcagctgaataagtac
gagtcgctggaactgtgcagaccagtgcttcagcagggacgcaaacagctcttggaaaaa
tggttaaaagaagataagctggagtgctcagaggagctaggagaccttgtgaaatctgta
gatcctacgctagcacttagtgtctatctgagagccaacgttccaaacaaagtcatccag
tgttttgctgaaacaggacaagtccagaagattgttttgtatgctaagaaggttgggtat
actccagactggatttttctgctgcggaatgtgatgagaatcagccctgatcaaggacag
cagtttgcacaaatgcttgttcaagatgaagagcctcttgcagacataacacaaattgtg
gatgtctttatggaatataatttaattcagcaatgtacagccttcttgctggatgcgctg
aagaataatcgtccctcagaaggtcccctgcagacacgtttacttgagatgaacctcatg
catgcacctcaggttgcagatgctatcctgggaaaccaaatgtttactcattatgaccgg
gctcacatagctcagctctgtgagaaagctggcttgctgcagagagcgcttgaacacttc
acagacttgtatgacatcaagcgtgcggtagttcacactcatcttctcaatcctgagtgg
ttagtgaattattttggttccttatcggtagaagactctctggagtgtctgcgtgctatg
ttgtctgctaacattcgtcagaacctgcagatctgtgtccaggtagcttcaaaataccat
gaacaactgtcaacacagtcacttattgagctgtttgagtctttcaagagctttgaaggt
ttgttttatttcctgggctctattgtaaacttcagccaggatccagatgtgcacttcaaa
tatattcaagctgcgtgcaagacaggacaaattaaagaagtagaaagaatctgcagggaa
agtaactgctatgatcccgaacgtgttaaaaacttcctcaaggaagctaaactcactgac
cagttgccgctcatcattgtgtgtgatcgctttgactttgtccatgacttggtgctgtac
ttgtatagaaataatctccaaaaatatattgagatttatgtacagaaggtgaatccaagc
cgtctgcctgttgttattgggggactgcttgatgtggattgctctgaagatgtgataaaa
aacctcattcttgtagtgagaggtcaattttcgactgatgagcttgttgcagaggttgag
aaaagaaacaggctgaaactgcttctgccctggctggaagcaagaattcacgagggttgt
gaggagcctgcaactcacaatgcactggccaaaatatacattgatagcaacaacaaccca
gaaagattcctgcgtgagaatccttattatgatagtcgcgttgttggcaagtactgtgag
aagagggaccctcacctggcctgtgtggcttatgagcgtggacagtgcgatttggaactt
attaatgtgtgcaatgagaactccctcttcaaaagtctttcccgctacttagttcgccgt
aaagaccctgaactgtgggccagcgtactactggaaagcaacccttacagaagaccgcta
attgaccaggttgtacagactgcgctgtcggagacacaggaccctgaggaagtctctgtt
actgtgaaggccttcatgactgcagatcttcctaatgagcttattgaactgctggagaaa
atagttcttgataactctgtgttcagtgagcacaggaatctgcagaaccttctcattctt
acggctattaaggctgatcgcacccgtgtcatggaatacatcaatcgcctggataactat
gatgctccagacatagccaatatagctatcagcaatgagcttttcgaggaggcatttgct
atcttcaggaagtttgatgtcaacacatcagctgtacaggtattaatagagcacattgga
aacctggatcgtgcgtatgaatttgctgaacgttgcaatgagcctgctgtgtggagtcag
ctggctaaagcacagcttcagaaagggatggtgaaagaagcaattgactcgtatattaaa
gcagatgatccttcctcatacatggaagttgttcaagctgccaatgccagtggaaactgg
gaagaactggtgaagtatctccagatggcacgcaagaaggcccgggagtcatatgtggaa
acagaattaatctttgctcttgctaaaacaaatcgtctagcagagctagaggagtttatc
aatggacccaacaatgcacatatccagcaagttggcgatcgctgttatgatgaaaagatg
tatgaagcagctaagctgttgtacaacaatgtgtccaactttggccgtttagcctccact
ttggttcacctaggtgaataccaggcagctgtggatggtgctcggaaagcaaacagcact
cgcacatggaaagaggtctgctttgcttgtgttgacggaaaagaattccgcctggcccag
atgtgtggactccatattgttgtgcatgcagatgagttggaagagctaatcaactattac
caggatcgtggctattttgaagagctgataactatgttggaagcagcacttggacttgag
cgagcacacatggggatgttcacagaactagcaattctctactccaaattcaagccacag
aagatgagggagcacttggagctgttctggtccagagtcaacatccccaaggttctgaga
gctgcagaacaagctcatctctgggctgaactggtgttcttgtatgataagtatgaagaa
tatgataatgccataatcacgatgatgaatcacccaacagatgcttggaaagaaggccag
ttcaaggatatcatcactaaggtggccaatgtggagctgtattacaaggcagttcagttc
tacttggaatttaaacctctgttgctcaatgatctgctgatggtgttgtcccctcggctt
gaccacactcgtgctgtcacctttttcacgaaggttaagcagctaccactggttaagcct
tacttgcgctctgttcaaaatcacaacaacaaatcggtgaatgagtccctgaacaacctc
ttcattattgaagaagactaccaggctcttaggacttctatagatgcttatgacaacttt
gacaacatttctcttgctcaacgtttggagaaacatgaactaatagagttccgaagaatt
gctgcatatctcttcaaaggaaacaatcgctggaaacagagtgtagaactctgtaagaag
gacagactgtacaaggatgcaatgcagtatgcttcagaatccaaagatactgagttagca
gaagagttgttgcagtggttcttgcaggagaacaagagagaatgctttggtgcttgtctc
ttcacctgctatgatctcctaaggccagatgttgtcttggaaacagcgtggagacacaac
atcatggactttgccatgccctactttattcaggtcatgaaggaatacttgaccaaggtg
gataaactggatgcatcagaatctttgagaaaggaagaggagcaagctacagaaacacaa
cctattgtttatggtcagccacagctaatgttgacagcaggacccagtgtcgcagttcct
ccacaagcaccttttggctatggctacaccgcacctccgtatgggcaaccgcagcccggc
tttgggtacagcatgtaa
DBGET
integrated database retrieval system
