Charadrius vociferus (killdeer): 104284379
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Entry
104284379 CDS
T08577
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104284379 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cvf04040
]
104284379 (TRPV1)
Ion channels [BR:
cvf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104284379 (TRPV1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank
Ank_2
YVC1_C
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
104284379
NCBI-ProteinID:
XP_009881009
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MSSILEKMKKFGSTDVEESEVTDEHMDGEDSMLETPDSLQGTLSTKVQPPKSNIFARRGR
FVMGDSDKDMAPMDSFYQMDHLMAPSVIKFHANLERGKLHKLLSTDSITGCSEKAFKFYD
RRRIFDAVAQGNTRDLDDLLLYLNRTLKHLTDDEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
DFFRKIKGKPGFYFGELPLSLAACTNQLCIVKFLLENPYQPANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPMLKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCVDTCEKNSVLEIIAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHIIILTAAAYYRPVEKEEKPPFTFGHSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSFKTLIVDSYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQDTNSSEYARCCHMKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVSKIAQESKSIWKLQRAITTLDIENSYL
NCVRRSFRSGKRVLVGVTPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLKRNP
SYSIKPGRVSGKNWKTLVPLLRDGSRREETQKLPEEVKLKPILEPYYEPEDSETLKESLP
KSV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccattcttgagaaaatgaagaaatttggcagtactgatgtggaggaatctgaa
gtgacagatgaacacatggatggggaggactccatgctggaaacgcctgacagcctccag
ggtacactcagcaccaaggtgcagccacccaaaagcaacatcttcgcaagacgtgggcgg
tttgtgatgggggatagtgacaaggacatggctcccatggactccttttaccagatggat
cacctgatggcaccttctgtcatcaaatttcatgccaatttggagagggggaaacttcac
aagctcctatctacagattccatcacaggctgctcagaaaaagctttcaaattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaagggacctggatgatctgcta
ctctatcttaatagaaccttgaagcatctcacagatgatgagttcaaagagccagagact
gggaaaacctgcttactgaaagccatgctgaatctacatgatgggaaaaatgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaagagtttgttaatgcagag
tatactgacaactactacaagggccagactgcacttcacatcgccattgagagaaggaac
atgtacctggtgaagctcttggtccagaacggagcagatgttcacgcaagagcctgtggg
gatttcttcaggaaaatcaaagggaaacctggcttttattttggggagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctccttgagaacccctaccag
ccagccaacatcgccgctgaggactccatggggaatatggtcctgcatacactggtggag
attgcagataatactaaggataataccaagtttgtaaccaagatgtacaataacatattg
atccttggtgccaaaattaatccaatgctgaagctagaagaactcaccaacaagaaaggg
ctgactccattaactcttgcagccaaaacagggaagatagggattttcgcttacatcctc
agacgagagatcaaagatcctgagtgcagacacttgtctaggaagttcactgaatgggct
tatggacctgtccactcatctctttatgacctgtcctgtgtagacacatgcgagaaaaat
tcagtgcttgagattattgcctacagtagtgaaacaccaaaccgtcatgagatgctgctg
gtggaacctcttaacaggctgctgcaagacaagtgggaccggtttgtcaaacacttgttt
tacttcaacttctttgtctataccatgcatatcatcatcctcactgcagctgcttactac
agacctgtagagaaggaggaaaagcctcccttcacatttggtcacagcactggggaatat
tttcgagtgactggagagatcctgagtgtactgggaggtctctatttttttttcagaggg
attcagtatttcgtgcagaggcgcccatcattcaagacgctgatagttgacagctacagt
gaggttctcttctttgttcactccttgctcctcctgagctctgtggtgctgtacttctgt
ggccaggaactgtatgtggcttccatggtcttctccttggcgctgggctgggctaacatg
ctgtactacacccgtggcttccagcagatgggcatttactctgtcatgattgccaagatg
atccttagagatttatgtcgcttcatgtttgtctatctagtattcctcttgggattttct
acagctgtggtgactttaattgaagatgacaatgagggacaagacacaaatagctctgaa
tatgctcgatgctgccatatgaaacgaggccgcacatcctacaatagtctatattatacc
tgcttggagcttttcaagttcactattgggatgggggacctggagttcacagagaactac
aggttcaagtctgtgtttgtcatccttttggttctctatgtcatccttacatacatcctc
ctgctcaacatgcttatcgcactgatgggggaaaccgtgagcaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaaccttggatattgaaaacagctactta
aactgtgtgaggcgctcgttccggtctgggaagcgagtcttggtgggggtcacacctgat
ggccaagatgattacagatggtgctttagggttgatgaagtgaactggtccacgtggaat
actaatctgggcataatcaacgaagaccctgggtactctggggacctcaaacgaaatccc
agttactctattaagcctggcagagtttcagggaaaaactggaaaacattggttccactt
ttaagagatggaagcaggagagaagagactcaaaaactaccagaagaagtcaaattaaaa
cctattttggaaccttattatgagccagaagattctgagacgttgaaggagtcacttcca
aagtcagtctaa
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