Charadrius vociferus (killdeer): 104284834
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Entry
104284834 CDS
T08577
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104284834 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104284834 (SMARCD1)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104284834 (SMARCD1)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104284834 (SMARCD1)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104284834 (SMARCD1)
PBAF complex
104284834 (SMARCD1)
GBAF(ncBAF) complex
104284834 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
104284834
NCBI-ProteinID:
XP_009881509
LinkDB
All DBs
Position
Unknown
AA seq
492 aa
AA seq
DB search
MYNLSYQSPPESCPSPCECQRRDTSRGPCSSPRWDTDKSDGLGFRGRRSGQAMLEPGAWP
PRQLLCACPASSETRGRSSPAILALQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPE
SQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGT
VASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTAT
TQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYI
KTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPND
QKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLS
FARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRR
QELEQALGIRNT
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacctgagctaccaaagccctccggagagctgcccttctccctgcgagtgccag
cggagagacacatctaggggaccttgctcctcgccacggtgggacacggacaagagcgac
ggcctcggatttcggggcaggcggtcgggtcaggcgatgcttgaacccggcgcgtggccc
ccgcggcagctgctctgtgcctgccccgctagttcagagactcgaggacgctccagcccg
gccatcctcgcgctccagcaggtgcagccgcaggccgtgcccaaccgcaaccacaacgct
aaaaagaagaagatggctgacaaaattctacctcagaggattcgtgaacttgtgcctgag
tctcaggcctatatggacttgctggcctttgaaaggaaattggaccagactatcatgagg
aaacgcttggatatccaggaggctttgaagcgaccaattaagcaaaaacggaagctacgt
atttttatctccaataccttcaatccagccaagtcggatgcagaggatggtgaaggaaca
gtggcctcctgggagcttcgcgtggaaggacggctgctggaagattctgctttgtccaaa
tatgatgccaccaagcagaaaagaaagttttcatccttctttaaatctctggtcattgaa
cttgataaagacctgtatggccctgacaatcacctagtagagtggcacaggactgctaca
actcaggagacggatggcttccaggtgaagaggccaggagatgtaaatgtgcgctgtact
gtccttctgatgctggattaccagcctccccagttcaaactggatccccgcttggcccgt
ctcttggggattcacactcagacccgtccagtgatcatccaggcattgtggcagtatatc
aaaacccacaagctccaggacccccacgaacgggagtatgtcatctgtgacaaatacctc
cagcagatatttgaatctcagcggatgaagttctctgaaatcccacaaagacttcatgcg
ttgcttatgccgccagaaccgatcatcattaatcatgtgatcagtgttgacccaaatgac
cagaagaaaacagcttgctatgacattgatgtggaggtggatgataccttgaaaactcag
atgaattcgtttctgctatccacagccagtcaacaggaaattgctgctctggataacaag
attcatgaaacaatagagacaattaaccagctgaagacccagcgtgagttcatgctgagc
tttgcccgagatcctcagggcttcatcaacgactggctacagtcccagtgccgggattta
aagacaatgactgatgttgttgggaatcctgaagaggagcgtagagctgagttctacttc
cagccgtgggctcaggaagctgtgtgcagatacttctactccaaggtgcagcaaagacgg
caggaattggagcaggccctgggaatccgtaacacatag
DBGET
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