Charadrius vociferus (killdeer): 104284859
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Entry
104284859 CDS
T08577
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cvf03016
]
104284859 (LCMT2)
Enzymes [BR:
cvf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
104284859 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
104284859 (LCMT2)
Transfer RNA biogenesis [BR:
cvf03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104284859 (LCMT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LCM
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_1
Motif
Other DBs
NCBI-GeneID:
104284859
NCBI-ProteinID:
XP_009881538
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MTKSSDISQRRSIVSLGAGFDSLYFRLKDIGLLHHTVIYEVDFPNVACQKAALIKRMKEL
SALVGDTEWEGLGVIAFSGEDYKLLGVDLSELSELERALEEAGLDNEIPTLFMAEVVLTY
MENSRSDALIQWAAEHFSQACFLLYEQMHPEDPFGRVMQQHFSQLNSALNSLAQYPDCEA
QQRRFFEKGWTECSVVDMNDFFTCCTPEVEQRRVQALEPFDEYEEWHLKCSHYFVLTASK
GMEPSWTPLLSSMTVPPHDSPVRISGSITAAVCATRSEISGLRRYGHRSVLIKPNVILTT
GGFGEEDGHHCRMRNFHVLIKHAGYWKAGYVKKENPHKRWDERLYHTVSCLSNSLALVVG
GRTSPSSAGLGMLWLKFPETSNASEPDDITVELVXXXXXXXXXXXWRHSTTEVIFKGKKY
LFLYGGRSAIEPVLGDWYFLHAQELSCTVIPVEGPVPESRHSHSACSWKGGVLIAGGLGA
AEQPLGSIFFLRELEHGFQWQTVETHPPLIPRYSHTAHVHDGKLLLVGGVWFHSSSVPGV
TVIDLITGLCLDYTINVEHLKWPLMLHNHSSVFLPNEKELLLIGGGGNCFSFGTHLNPEP
VSLSLSNILASH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcatcagacatctcccagcgcaggtctatcgtgtctttaggtgctggcttt
gactccttatacttccgtttgaaggacataggtcttctgcatcacactgtgatatatgag
gtggatttcccaaatgtggcatgccaaaaagctgctctgatcaaaagaatgaaagagttg
tcagcactggtgggagatactgaatgggaaggattaggagtcattgccttttctggagag
gattacaaattactgggagtggatttatcagagctgtctgagctggagagagcgctggaa
gaagcaggactggacaatgaaatccccaccctcttcatggcagaggtggtgctcacctac
atggaaaatagcaggtcagatgccttgattcagtgggcagcagagcatttctctcaggcg
tgctttctgctgtacgagcagatgcacccagaggacccctttggacgtgtcatgcagcag
cattttagccagctgaactctgcacttaattctttggcacagtaccctgattgtgaggca
cagcagaggcgctttttcgaaaagggctggactgaatgcagcgtcgtggatatgaatgac
tttttcacctgttgtacgccagaagttgagcagcgaagagtgcaggctctggagcctttt
gatgaatatgaggaatggcatctgaaatgttctcattactttgtcttgactgcgtcaaag
gggatggaaccttcatggactccattgttatccagtatgacagttcctcctcatgatagt
cctgtcaggatatctgggagtatcactgcggcagtgtgtgcaacgcgctctgaaatttct
ggcctgaggcgttacggtcaccgctccgttcttataaaacccaacgtgattctcaccact
ggaggctttggggaggaggatggacatcactgccgtatgagaaattttcacgtgctaatt
aagcatgcaggctactggaaagctggctacgtgaaaaaggaaaatcctcataaaagatgg
gatgagcggttgtaccatactgtgtcatgtctctcaaacagtctggccctggtggtagga
ggacgaacatccccatcaagtgcaggcttgggaatgttgtggctgaagttccctgaaact
agtaatgcctcagagccagatgacattacagtggagcttgtaannnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnntggaggcacagtacaaccgaagtaatattcaaaggcaagaagtac
ttgtttctgtatggtggccgctctgctatagaacctgtgctaggggactggtatttcttg
catgctcaagaactttcctgcactgtgattcctgttgagggtccagtaccagaaagccgt
cactctcacagtgcctgtagctggaaaggaggagtactaattgcaggaggtctgggagca
gctgagcagcccttaggttcaattttctttctgagggagcttgaacatggctttcagtgg
cagacagtagagacacaccctcctctcatcccaaggtattcgcacactgcacatgtacat
gacggaaaacttctgcttgttggtggagtgtggtttcactcatcctctgtgccaggcgtc
actgtcattgacttaataactggtctctgcttggactatacaattaatgtggagcatctg
aagtggccgttaatgctacataatcatagtagtgtttttctgccaaatgagaaggagttg
ttgcttattggtggtggtgggaactgcttctcctttgggacacacctgaacccagagcct
gtctcgttgagcctcagcaatatcctggctagccactga
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