Charadrius vociferus (killdeer): 104284874 Help Entry 104284874         CDS       T08577                                  Symbol SF3B3 Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism cvf  Charadrius vociferus (killdeer) Pathway cvf03040   Spliceosome Brite KEGG Orthology (KO) [BR:cvf00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104284874 (SF3B3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cvf03021]     104284874 (SF3B3)    03041 Spliceosome [BR:cvf03041]     104284874 (SF3B3)    03036 Chromosome and associated proteins [BR:cvf03036]     104284874 (SF3B3) Transcription machinery [BR:cvf03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      104284874 (SF3B3) Spliceosome [BR:cvf03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     104284874 (SF3B3)  Complex B     104284874 (SF3B3)  Complex C    U2 SnRNP specific factors     104284874 (SF3B3) Chromosome and associated proteins [BR:cvf03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      104284874 (SF3B3)     TFTC complex      104284874 (SF3B3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-GeneID:  104284874 NCBI-ProteinID:  XP_009881553 UniProt:  A0A0A0ABF9 LinkDB All DBs Position Unknown AA seq 1217 aa AA seqDB search MFLYNLTLQRATGISYAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNVFEKIHQETFGKSGCRRIVPGQY LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDT PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVN ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG DEWYVLVGVAKDLILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVL IGVGKLLRVYDLGKKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQ LIIFADDTYPRWVTTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLLGGIGILVPFTSHEDHDF FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVAEELDRT PPEVSKKLEDIRTRYAF NT seq 3654 nt NT seq  +upstreamnt  +downstreamnt atgtttctctacaacctgacgttgcagcgagccaccggcattagctatgctatccatggc aatttctcaggaaccaaacaacaagaaattgttgtttcccgcggcaagatcctggagttg ctccgtcctgatcccaacacagggaaggttcacacgctgctgaccgtggaagtgttcgga gtcattcgctccctcatggcctttagactgacaggtgggaccaaagactatatcgtggtg ggcagcgattcagggcgcattgttattctggagtaccaaccctcaaagaatgtgtttgag aagattcatcaggaaacctttggcaagagcggatgtcgcagaattgttccaggccagtac ttggctgtagacccaaagggccgcgctgtcatgatcagtgcaattgaaaagcagaagctg gtgtatatcttgaacagagatgctgcggctcgtctcaccatttcctccccactggaagcc cacaaggccaataccttggtctaccacgtggtgggagtcgatgtgggatttgaaaacccc atgttcgcttgtctggaaatggattatgaggaagcagataatgatccaacaggagaagca gcagccaacacccaacagaccttgacattttatgaattggacttgggtttgaaccacgtt gttaggaaatacagtgagcccttggaagagcacggcaactttcttataacagttcctggt ggttctgatggacctagtggagtgctgatctgttctgaaaactatattacttataaaaac ttcggtgaccagcctgatatcagatgcccaattcccagaagacggaatgacttggatgac ccagagagaggtatgatttttgtctgctctgctacacataagaccaagtccatgttcttc ttcctggcccagacagaacagggagacatcttcaaaattactctggagactgatgaagac atggtaacagagattcgactgaagtactttgacacggttcctgtcgctgctgccatgtgc gtgctgaagacggggtttctctttgtggcatctgaatttggaaaccattacctgtaccag atagctcacctgggtgacgatgacgaggagccagagttctcttctgccatgcctcttgag gaaggagatacgttcttttttcagccacgacctctcaagaacctggtgctggtggatgag ttggacagtttgtctcctattctgtgttgtcagatagcagatttggccaatgaagacaca ccccagttgtatgtggcttgtggtcgggggccccggtcgtctctgagggttctaagacat ggacttgaggtctctgaaatggccgtctcagagctgcctggtaaccccaatgctgtatgg accgtgagaagacatgttgaagatgaatttgatgcctatatcatcgtgtccttcgtaaat gccacactggtgctgtccatcggagagactgtagaagaagtgactgactctggcttcctg ggtactacacctaccttgtcctgctctcttcttggtgatgatgctttggtacaggtttat ccagatggaattcggcacatccgagcagataagagagtgaatgaatggaagacaccaggg aagaaaaccattgtaaaatgtgctgtgaaccagagacaagtcgtgatagcactgactgga ggagaactggtttactttgagatggacccgtcaggacagctgaatgagtacacggagaga aaggagatgtcggccgacgtcgtttgcatgagcctggccaatgttccccctggggagcag cgctcccgtttccttgctgttgggttggtggacaacactgtcagaattatttcccttgac ccttcggattgcttacagccgctgagtatgcaggcccttcctgcccagcccgagtcgctg tgcattgtggaaatgggtggcacagagaagcaggatgagctgggggagaggggctccatt ggctttctgtacctgaacattggactgcagaatggtgtgctgctgcgaaccgtcctggat cctgttactggcgatctttccgataccaggaccagataccttggctcacggcctgtgaaa ctcttccgagtccgaatgcaaggccaagaggcggtgctggccatgtcaagccgttcctgg ctcagttattcctatcagtcgcgcttccacctgactcccctgtcttacgagactctggag tttgcctctggttttgcttctgagcagtgccccgagggcatcgtagccatctccacaaac acattgaggattttggcactggagaagctgggggcagtcttcaaccaggttgccttccca ttgcagtacacacctcgaaaatttgtcattcacccggagagcaacaacctgatcatcatt gagacagaccacaacgcttacactgaggccaccaaagcccagaggaagcagcaaatggcc gaggaaatggtggaggctgcgggtgaagatgagagggagttggctgcagaaatggctgca gcctttctgaacgagaatcttcccgagtccatctttggtgctcccaaggccgggaatgga cagtgggcctctgttatcagggtgatgaaccccatccagggaaatacgttagatctggtc cagctagagcagaacgaagctgccttcagcgtggctgtgtgccggttctccaatactggt gatgagtggtatgtgctggtgggagtcgccaaggacctgattctgaacccacgctcggtt gctgggggatttgtctacacgtacaagctggtgaacagtggtgagaagctagagtttctg cacaagacccctgtggaggaagttcctgcagccattgctccgttccaaggtagagtctta attggagttggaaagctcttgcgtgtttatgacctggggaagaagaaactgcttcggaag tgtgagaataagcacattgccaactacatctgtgggatccaaaccattgggcacagagtg attgtttcagacgttcaggagagtttcatctgggtgcgctacaaaaggaatgagaaccag ctcatcatctttgctgatgacacttacccccggtgggtcactacagcaactctcctggat tatgacactgtggctggagcagacaaatttggcaacatctgcgtggtgagattgcctccc aacaccaacgatgaggtagatgaggatcccacaggcaacaaagctctctgggacaggggc cttcttaacggagcatcacagaaggctgaagtgattatgaattaccacgtgggagagacg gtgctttccttacagaagaccacgctgatccctggaggctctgaatctcttgtttatacc accttattgggagggataggaatcttggtccctttcacttcccatgaggatcatgacttc ttccagcacgtagaaatgcacttaagatctgagcaccctcccctctgtggacgagaccat ctcagtttccgttcctactacttcccggtgaagaatgtgatcgatggggacctgtgcgag cagttcaactccatggagcctaacaaacagaaaaatgtggccgaagagctggaccggacc ccacccgaggtgtccaagaagctggaagacatccgcacgcgctacgctttctga

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