Charadrius vociferus (killdeer): 104285196
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Entry
104285196 CDS
T08577
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
cvf
Charadrius vociferus (killdeer)
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cvf03041
]
104285196 (DHX35)
Enzymes [BR:
cvf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104285196 (DHX35)
Spliceosome [BR:
cvf03041
]
Complex C
Other components
Complex C specific factors
104285196 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
AAA_7
UPF0203
Motif
Other DBs
NCBI-GeneID:
104285196
NCBI-ProteinID:
XP_009881928
LinkDB
All DBs
Position
Unknown
AA seq
722 aa
AA seq
DB search
MATGGASRGLRRRFRLPSHPKLAAPVGPGKACTEGPGVSVSEERQSPTESSGITVIYNPY
ASLSIEQQRQKLPVFKLRNHILYLVENYQTLVIVGETGCGKSTQIPQYLAEAGWTAEGRV
VGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMM
ADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFFNQ
NDTGDPSKDTSVILTVEGRTFPVDIFYIQSPVPDYIKSTVETAMKIHQMENDGDILAFLT
GQEEVETVVSMLIEQARALSRTGMKKHLRVLPMYAGLPSPEQMKVFERVSHSVRKVIVAT
NIAETSITIHGISFVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGLRVGTQSQIA
LFSPTTEEDFEKLPKSTVPEMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALE
LLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIF
VIPPNQKAQAARQHRKFAVEEGDHLTMLNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVV
REQLKKLLVRFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPT
SVLYAEKPPRWVVYNEVIQTAKYYMRDVTAVESAWLLELAPHFYQQGTHLSLKAKRAKVD
DH
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgggcggcgcgtcacgtgggctccgccgccgcttccgcttgccctctcacccc
aagctggcggcgcccgtgggaccggggaaggcttgcacggagggtcctggtgtcagtgtc
tcagaggagagacagagtcctactgagagtagtggcataactgtcatctataatccttat
gcttccctttctattgaacaacaaagacaaaaactgccggtttttaagctaagaaatcac
atactttatctagtggagaattatcaaactctggtgattgttggggaaacaggttgtggg
aaatcaacgcagattccacaatacctagcagaagctggctggacagctgaaggaagagtt
gttggagtgacacagcctcgtcgggttgctgctgtttcagttgcaggccgagttgcggat
gaaagaggtgcagtgttgggtcatgaagttggatattgtattcggtttgacgattgcaca
gatcctcaggctaccagaattaagtttctaactgatggtatgctggtgagggagatgatg
gctgatcccttattaacaagatacagtgtcctcatgctggacgaagcccatgaaaggact
ctttatacagatattgccattggcttactaaaaaaggttcaaaagaagcgtggggatctt
cgactgattgtggcttcagccaccttggatgcagagaaattcagggatttcttcaatcaa
aacgataccggtgaccccagcaaagataccagtgtgatccttactgttgaggggagaaca
tttccagtggacatcttttacatacagagtcctgttccagactatataaaatcaactgtg
gaaactgccatgaaaattcaccagatggagaatgatggggatatactggcatttttaact
ggccaggaggaagtggagactgttgtttctatgctcatagaacaggctcgggccctttct
cgcactggaatgaaaaaacacctccgtgttctccccatgtatgctgggctgccgtctcct
gagcaaatgaaagtgtttgagagagtttcccacagtgtcaggaaggtgatagtagccacc
aacattgctgagacctccatcacaattcacggcatttcattcgtaattgattgtggtttt
gtgaagctgcgggcctataaccccaaaacagccatcgaatgccttgtggtggtaccagta
tcaaaagcttcagctaatcagagagcagggctgagagttggaactcagtcccaaattgct
ttgttttctcccacaacagaggaggacttcgagaagctgccaaagtccactgttcctgag
atgcagcgcagtaaccttgcacccgtcatcttgcagctgaaggctttgggaatcgacaat
gtgctcaggttcccctttctttcgccacctcctgcacagtcaatggtgcaagctttagaa
ttgctgtatgctttaggaggtttggatatgcactgccgtttaacagagcctcttggaatg
agaatagcagagtttcctttgaatcctatgtttgcaaagatgcttctggaatcaggaaat
tttggctgctcccaggagattttgacaattgctgccatgatgcagattcaaaacattttt
gtgatccctccaaatcaaaaagctcaggctgcgaggcaacacagaaagtttgctgtggaa
gaaggtgatcatctcactatgcttaatgtttatgaagcctttgtcaaacacagcaagagc
tctcagtggtgtcaggaacactttctgaactacaaagggcttgttagagcttctgttgta
agagagcagctgaaaaagcttctcgtccgctttaaagtgccaaagaagtccagtgaaggt
gatccagatcctgttttgagatgcatagtttccggattctttgctaacgcagctaaattc
cactctactggagcttacaggactatccgtgatgaccatgaacttcatatccaccccact
tcagtgctgtatgcagagaaacctccacgctgggtagtctacaatgaagtcatacagact
gctaaatactacatgagagatgtgactgctgttgaatctgcatggctcttggaactggcc
cctcatttttaccagcaaggaacgcatctttccttgaaagccaaaagggctaaagtagat
gaccactga
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