Charadrius vociferus (killdeer): 104285234
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Entry
104285234 CDS
T08577
Symbol
SPAM1
Name
(RefSeq) hyaluronidase PH-20
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf00531
Glycosaminoglycan degradation
cvf01100
Metabolic pathways
cvf04142
Lysosome
Module
cvf_M00076
Dermatan sulfate degradation
cvf_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
104285234 (SPAM1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
104285234 (SPAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cvf02042
]
104285234 (SPAM1)
00536 Glycosaminoglycan binding proteins [BR:
cvf00536
]
104285234 (SPAM1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvf00537
]
104285234 (SPAM1)
Enzymes [BR:
cvf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
104285234 (SPAM1)
Bacterial toxins [BR:
cvf02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
104285234 (SPAM1)
Glycosaminoglycan binding proteins [BR:
cvf00536
]
Heparan sulfate / Heparin
Enzymes
104285234 (SPAM1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cvf00537
]
Enzymes
104285234 (SPAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_56
CDC13_N
Motif
Other DBs
NCBI-GeneID:
104285234
NCBI-ProteinID:
XP_009881962
LinkDB
All DBs
Position
Unknown
AA seq
572 aa
AA seq
DB search
METLRQIQSFGICVTCTYPIASGMVFATLLVSCCSSLNIRARPLVSNSPFLSIWNAPTEL
CPERTGVQLDMEFFSLIGSTLKTSIGQNITLFYPDRLGYYPYKNEVTGEAFNGGLPQLLL
LENHLKKAKEDIQFYIPSDEQFGLAVIDWENWRPVWIRNWGSKDIYRQESIELVQQRDLS
LSEAEARNIAKMEFEAAAKSIMLESLKLGIELKPNRLWGYYLYPDCYNYDYKQNPHNYTG
TCLDIEIERNNELNWLWEKSTALYPSVYLETALKSSRNAQLFVRNRVREAIRISYVSNST
HPLPVFVYTRPVFTDVYEEYLSQDDLVNTIGESAALGASGIVIWGDMNLTQNKNTCRTLD
NYLRRTLTPYLINVTMAARICSQVLCQDSGACVRKKWNSSDYLHLNPENIVIQMTKDGKY
TLRGQPAFQDLQTFIEKFDCHCYAGHSCEPRVDINDIHYLHACISEDICIHVSSNSLSNI
EASEEKILSNRTVFSPTSQSKVTLSTHPEIEDFQSTFGNNILNVTSAEYNTVTAATGYDL
EANDTRTFSSSSSYKIRMFNLFCLILILRILI
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctaagacaaatacaaagttttggtatctgtgttacctgtacatatcctata
gcatccggtatggtgtttgccactcttctagtttcttgctgttcatctctgaacataaga
gctcgtccacttgtttctaattcacctttcctttctatctggaatgctcctacagagctt
tgtccagaaaggactggagtgcagctggacatggaatttttttctctcattggaagcaca
ctgaagacatccattgggcaaaacatcactctcttctatccagacaggcttggctactat
ccttacaaaaatgaagtcacaggagaggcattcaatggaggtctcccccaactcttgctg
ctggagaatcatttaaaaaaagccaaagaggacatccagttctatattccttcagatgaa
cagtttggattggctgtcattgactgggaaaactggagacctgtgtggataaggaactgg
ggatcaaaagacatttacagacaggaatccattgagctggttcagcagagagacctcagt
ctatcagaagccgaagccaggaatatagctaaaatggaatttgaagctgcagcaaaatca
attatgttggaatctttaaagctgggcatagaattgaagccaaatcgtctgtggggatat
tacctttatccagactgttataactatgattacaaacaaaacccacataattatacagga
acctgtttagacattgaaatagaaagaaataatgagcttaattggttgtgggagaaaagc
acagcactttacccatctgtctatctagagacagccttaaagtcttccagaaatgcccaa
ctctttgttcgcaacagagttcgagaagccattagaatttcatatgtctctaattctact
catcctcttccagtttttgtatatacacgtccagtattcacagatgtctatgaggaatat
ctctcccaggatgacctggtaaacaccattggagaatctgctgcactgggtgcttctgga
attgtgatctggggtgatatgaatttaacacaaaataagaacacctgtaggactctggac
aactaccttaggaggactttgaccccatacctcatcaatgtcacaatggcagccagaatc
tgtagccaagtgttatgccaagactctggtgcttgcgtacggaaaaaatggaattccagt
gactatcttcacttgaaccccgagaatattgtcattcaaatgacaaaggatggaaaatac
accctacgagggcaaccagcatttcaggatctgcaaacattcatagaaaaattcgattgc
cactgttatgcagggcacagttgtgaacctagagttgatataaatgacatccattacctc
catgcttgtatttcagaagatatctgcattcatgtgtcctcaaattcactttctaacata
gaagcctctgaagaaaagatcctgtctaacagaactgtattttcacctacctctcagagt
aaggtgacattatctacacatcccgaaatagaagattttcaatctacctttggaaataat
atactcaatgtaacatctgcagaatataacactgtcacagctgccactggatatgatctg
gaagcaaatgacactcgtactttcagtagttcttcatcctataagataaggatgtttaat
ctgttttgtttaattctaattttgagaatcttaatataa
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