Charadrius vociferus (killdeer): 104285709
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Entry
104285709 CDS
T08577
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03013
Nucleocytoplasmic transport
cvf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104285709 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104285709 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104285709 (NUP153)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104285709 (NUP153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
104285709
NCBI-ProteinID:
XP_009882497
LinkDB
All DBs
Position
Unknown
AA seq
1450 aa
AA seq
DB search
MKDRAAIEGSQWNWSARNLVRFDKSKCEVLHLGQNNPTYLLDSKLNLSQQHALEGIISRV
TESVKNIVPGWLQKYFNKSEDECVDTNESTNQEENPVNYHHDYANEDTIVIDGRVTPESA
RINLEEPSTSRPALNFSDVLTRPSLHRSHLNCTMLDSAVPHCQPSTSSSLGIGSPGLSLV
KEIKDSTSQHDDDNISTTSGFSSRASDKDITVSKNTSAPLLWSTEAERSHSLSQHPAASS
KKPAFNLSAFGSPSPSLGNTSVFKTSQLGDSPFYPGKTTYGGAAAAARETKARIAPYQPP
VRRQMKAKQASVQSYGVTSSTARRILQSLEKMSSPLADAKRIPSSVSSPLSSPVDRSVLN
ITGFQSKRKQMESQHPPVQKLVTPKAISLPVSRTQYFKPSLTPATDSSKIQQRVDIKHKG
MREKSFPAEQRVKPSESNLTYPKFGTPASNDYVSKPGQEQQVEEPVLPKVPLPISTASLP
SFNFSFLASSTASSSPSTVSTAVMNKVQPASNVGSPVFRFSSPIVKSTEAEVLPPLSIGF
TFSVPVVKSAELSGSSDTPVTSLLTLDTATVNSTSNKKEEKEEYVGPSKPAKVLKEGSVL
DILKSPGFTSVKTHSSTSAQPVTSTVVYTRPAISSFSAGKDTPKQSSSFWQSDTHDLCLQ
NKTTDSKCVTCQAANVSTVESTKQTISSSQCVTSKAAVPAAGTLGFEDKFKTAPNTWDCD
TCLVQNKPEATKCIACETPKPGTGVTPALTLPVVTDNSVTVTSSSSSTDTTVTLGFGDKF
KKPKGSWDCAVCLVLNKAEDSKCVACQSEKPGSSVPVTSSSVSAFSASSGGFLDLDKFKK
PEGSWDCEVCLVQNKAEATKCVSCESAKPGTKAELKGFGTPTVSTNAAMPSFTFGVQSSS
SESSHTLGSTGNFKFGEQGSFKFGIASESASSNTVTGGFKFPTSSGDFKFGVSSSDSKSE
DSKKESKSNSFTFGLPSTSSQAPSTFQFGTASLGQQEKKEEPVLGGFGFGTSSTSSVATN
ENKTGVSGFTFGTVAEKEVASPALAFKKSDEKKDESLSTKGGFSFGSVESASASQFVLGR
TEEKQDSVTSAAPLAFGKKADNEELKAQPIFSAGTAEHTKEESTAKPIFNFSFVKPSEKE
TEQAKPSFAFGAQTSTSDQGAAKPSFSFLSSSSSSTVVPTTSANSSSVFGSAISSSNPQP
VPAPFVFGQPSNTVSSSVFGNSTESAASQSFGFSQENKPATTSSSTALASFLFGSGASST
NAANSGFTFGATTTSSSTGSSSSFLFGSGPPAPAAGPAFGASQPPAFGQSQGSSQPSAPS
FGSLSTTLFSAGAQPAPPAFGSVTSSTQPSVFGQQATQQPGFGSAAPSAGSVFQFGSNTS
NFNFPNNPRVFTFGANPPAPAAPAQPSGSSGFSFSQPPAFTVGTNGKNVFSASGSSVSGR
KIKTAVRRRK
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatagggctgccattgagggatctcaatggaactggtctgccaggaacctcgtg
aggtttgataaaagcaaatgcgaagtccttcatctgggacaaaacaaccccacgtacctg
ctggacagcaagttgaacctgagtcagcagcatgccctggagggaatcattagcagagtt
acagaatctgtgaaaaacattgtaccaggatggttacagaagtatttcaataaaagtgaa
gatgaatgtgtagatacaaatgaatctacaaaccaggaagagaatccagtaaactatcac
catgattatgcaaatgaagataccatagtgattgatgggagagtcacgcctgaatcagca
agaattaatttagaagaaccatctacgagtagacctgcattgaacttctcagatgtgtta
acaaggccctctcttcatcggagccatttgaactgtaccatgttggattccgcagtacca
cattgtcagccctctacatcttcttcacttggcattggcagtcctggactgtctcttgta
aaagaaataaaagattctacctctcagcatgatgacgataacatctcaacaaccagtggc
ttctcctctagagcatctgataaagatatcacagtttcaaaaaatacttcggcaccgctg
ctctggtccacagaggctgaaagatctcattccctctcacagcatcctgcagctagctcc
aaaaaacctgcattcaatttatctgcttttggatctccctctccttcacttggaaacact
tctgtctttaagacaagccagcttggggattctccattttaccctggaaagaccacctac
ggtggtgcggctgcagcagcaagggagacaaaagcgcgaattgctccttatcagccccca
gtaagaagacaaatgaaagctaaacaagcaagtgtgcaatcctatggtgtgacaagttcc
acagcgcggcgcatcttgcagtccttggagaagatgtcaagtccgttggcggatgctaaa
aggattccgtcttctgtttctagtccgctgtcttctcctgtggacaggagtgtgctgaat
attactggcttccaatccaaacgaaaacagatggaatcacagcatccacctgtccagaaa
ctggtgacgccaaaggcaatctctctgccagtgagtcggacccagtattttaaaccatct
ctgactccagctactgattccagcaaaattcaacagagggtagatataaagcacaaaggc
atgagagagaagagttttccagcagaacagcgagtaaaaccatctgaaagcaatttgacc
tatcctaaattcggtactcctgcatccaatgactatgtatcaaaacctggacaagaacaa
caggtggaagaaccagtactaccgaaagtacccctacccatcagtactgcatcgctgcct
tcgttcaacttcagttttcttgccagtagtactgcctcatcatcaccaagcactgtttca
acagcagtgatgaacaaggtacaaccagcaagtaatgttggcagtccggtgttcagattt
tcatctccaattgtgaaatctactgaggcagaagtgctgcctccgttgtctattgggttt
acatttagtgttcctgttgtaaaatcagcagagctttctggatccagtgatacaccagtg
acgtccttacttactctagatactgccactgtaaacagcaccagcaataagaaggaagaa
aaagaagaatatgttggtccctccaaacctgcaaaggtcttaaaggaaggaagtgtgtta
gacattctaaaaagccctggctttacgtctgtgaaaacacactcctctacatctgcacag
cctgttacaagcacagtggtctatacaaggcctgcaataagtagtttttctgcaggcaaa
gacacccctaagcaatcatcttcattttggcagtctgacacacatgacctgtgtctgcaa
aacaaaaccacagatagcaaatgtgtaacatgtcaagctgctaacgtgtctacagttgag
agtacgaaacagacgataagctcaagccagtgtgtcacctctaaggcagcggtccctgca
gccgggacgttgggctttgaagacaaatttaaaacagcacccaacacgtgggactgtgat
acctgtctggtccagaacaaacccgaagctacaaaatgtatagcctgtgagacaccaaag
cctgggacaggagtaacgcctgctctgacattgccagtggtcacagacaactcggtgaca
gtgacatcctcctccagcagcactgacacaacagtcactctggggtttggagacaaattt
aagaagccaaaaggctcttgggactgtgcggtgtgccttgtattaaataaggcagaagac
agcaaatgtgtagcttgtcagtctgagaaaccagggagttcagtgcctgtgaccagtagc
agtgtttctgcattttctgcttcttcaggaggatttctggatttagacaaattcaagaag
cccgaaggaagctgggattgtgaggtctgcttggtccaaaacaaagcagaagccacaaaa
tgtgtatcctgtgaaagtgcaaagccaggcaccaaagcagaactcaaaggttttggtact
cctactgtgtccacaaatgctgcaatgccatcatttacatttggtgtccagtcgtcctcc
tctgaatcttctcatacgttaggtagcacaggaaattttaaattcggagagcaagggagc
ttcaagttcggcattgcatctgaatctgcatcctccaacactgtgactgggggttttaag
tttcctactagttcaggggacttcaaatttggagtttcttcctcagactctaaatcagaa
gacagtaaaaaagaaagtaaaagtaacagttttacctttggactgccatctacaagcagt
caggcaccttccacatttcagtttgggacagcgagcctgggacagcaggaaaagaaagag
gaaccagttttgggaggctttggttttggcacgagttcaacttcttccgtagctaccaat
gagaataaaactggagtcagtggtttcacttttggaactgtggcagaaaaggaggtagca
tcacctgctctagcatttaagaagtcagatgagaaaaaggatgaaagtctttcaacaaag
gggggcttctcttttggcagtgtggagagtgcctctgcctcacagtttgttttgggaagg
acagaagagaaacaggactctgtcacttctgctgctccattagcatttggaaagaaagct
gacaatgaagagttaaaggcacaacctatcttttcagctgggacggctgagcataccaaa
gaggagagcacagcaaaacctatattcaattttagtttcgtcaaaccatcggagaaggaa
actgagcaggcaaagccgtcttttgcatttggggcacaaaccagtacttcagatcaagga
gccgcaaagccatccttcagcttcctgagctcaagttcctccagcacagttgtacccacc
acttcagccaacagcagcagtgtgtttggcagcgccatctcttcctcaaatcctcagccc
gttcccgctcccttcgtgtttggacaacccagcaacactgtgagcagctctgtttttggc
aattctacagaatctgcagcatctcagtcatttggcttctctcaagaaaacaaaccagca
accacatcttccagcacggctcttgcttcatttctctttggttcgggagccagcagtacc
aatgcagcaaattcaggttttacctttggagccacaaccacatcaagttcaacagggtca
tcctcttcgtttctgtttggctctgggcctccggcgcctgctgctggcccagcatttggc
gccagtcagccaccagcatttggccagagccaagggtccagccagccaagcgccccaagt
tttggatcgctgtcgacaacgctgttttcagctggcgctcagcctgctcctcctgccttc
ggctcggtgacgagcagcactcagccctccgtgttcggacagcaagcgacccaacagccg
ggctttggctctgctgctcccagtgctggttctgtattccagttcggaagtaatacttct
aatttcaacttcccaaataacccccgagtatttacttttggtgcaaatcctcctgcacca
gcagcaccggcacagccttctggctcctctggattttcgttcagccagcctccagcattt
acagtggggactaatgggaaaaatgttttctctgcctctggatcttcagtttctggtcgg
aagataaagactgcagttagacgtagaaaataa
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