Charadrius vociferus (killdeer): 104285747
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Entry
104285747 CDS
T08577
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104285747 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cvf03019
]
104285747 (SMG7)
Messenger RNA biogenesis [BR:
cvf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
104285747 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
104285747 (SMG7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
104285747
NCBI-ProteinID:
XP_009882547
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKN
RANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSA
IVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASS
KGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSKALESRDEVKTRWSVSDFIKAFIKFHG
HVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQQLVHITVINLFQLHHLRDFSNETEQH
SYSQDEQLCWTQLLALFMSFLGVLCKCPLQNDYQEDSGAAYPLPAVKVSMDWLKLRPSVF
QEAVVDERRYIWPWLISLLNSFQPHEEDLSNNNATPLPEEFELQGFLALRPSFRNLDFSK
GHQAITGDKEGQQRRIRQQRLIFTGKWIADNQPRLIQCENEVGKLLFLTEIPELLLEDPS
EAKESLALQETCVAEPLSTDGSPGLKSVLSSGRSLNNCDAGEKPMVTFKENIKPREINRE
QGRIYPPKDVGRETRDYSKGIVANKNDGKKDNNKRKNETKKCGLDKMQEAGKQNVAVQVK
SQTEMRKTPVSEARKTPVTQTPSQASSSQFIPIHHPGAFPPLPSRPGFPPPTYVVPPPVA
FSMSTGYTFPGSVSVPGTFLQPTAHSPAGNQVQGGKQSHIPYSQQRPSGPGPMTQGPQQT
PPPSQQPLSSLPAQATAQSAGQLQVQALAQQQQQQSPTKAVQGLGKSPPHHSGFQQYPQT
DSSKQLWNPPQVQGSLGKIMPVKQSYYLQAQDPLKLFEQSLQPPVMQQQPLEKKMKPFPM
EPYNQNPSEVKVPEYYWDSSYGMADNRVMAQQSNMDRRGKRQGVFRPEQDAVSRMTFEDP
KSSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLGPLASLPGRSLFKSLLEKPSELMS
QSSSFLSLSGFSLNQERYRFDSMFNEVYGKNMNTSTKTEVTPSVAHQETSLYSLFEGTPW
SPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRVADRW
KTDKPAMGGFGLDYLPATSSSSESSWHQSSAPSGTWAAQGPPAMEDSSAVLMESLKSIWS
SSMMHPGPSALEQLLMQQKQKQQRGQGSMNPPH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaagctgggtccagcagaagtctggacgtccagacaggctctacaggac
ttatatcagaaaatgctagtgaccgatttggaatacgctttagataaaaaagtggagcag
gacctttggaatcatgcctttaaaaatcagatcacgacgctacagggtcaggcgaaaaat
agagcaaatccaaatcggagcgaagttcaggcgaacctttctctgttcttagaggcagct
agtggcttctacacacagttattacaggaattgtgcacagtttttaatgtagacttgccg
tgtcgtgtaaagtcttcccagctgggaatcattagcaataaacagacgcacaccagcgcc
atagtgaagccgcaatctagctcctgctcttacatctgccagcactgccttgtccacctt
ggagatattgctcgctataggaatcagaccagccaggcagagtcttactacagacatgca
gctcagcttgtcccttctaatggtcagccttataatcagttggctattctagcttcctcc
aaaggagaccacttgaccacaattttctactactgcagaagcattgctgtgaagtttcct
ttcccagctgcctccactaacttacaaaaagcactttctaaagcactggaaagtcgtgat
gaggtgaagactcgatggagcgtgtctgacttcatcaaggcatttattaaattccatggc
catgtgtacctgagtaagagcttggagaagctgagccctcttcgagaaaagctggaagaa
cagttcaagaggttgttattccaaaaggccttcaattctcaacagttagtacatattact
gttatcaatctgtttcaactacatcacctgcgagacttcagcaatgaaacagagcagcac
agctacagccaggatgagcagctctgctggacacagttactggctctcttcatgtccttt
cttggagttctgtgcaagtgtcctttacaaaatgactaccaggaggactctggggctgca
tatcctctcccagctgtgaaggtttcaatggactggctgaaacttaggcccagtgttttc
caggaggcagtggttgatgaaagacggtacatatggccctggctgatttctcttctaaac
agcttccagcctcatgaagaagatctatccaataataatgcaaccccccttccagaagaa
tttgagttgcagggattcttggctctgaggccctcgttcaggaacttggatttttccaaa
ggccaccaggcaattacaggagataaggaagggcaacaacgtcggatacggcaacagcgt
ctgattttcacaggcaaatggattgctgacaaccagccgaggttgattcagtgtgaaaat
gaggtaggaaagctgttgtttttgacggaaatcccagaattattactagaggaccctagt
gaagccaaagagagtctcgccttgcaggaaacgtgcgttgcagagccactatctacagat
gggagccctggactcaagtcagttctgtcctctggcagaagcctgaacaactgtgatgcc
ggagaaaaaccgatggtcacattcaaagagaacatcaagccacgggaaattaacagagag
caagggcgaatttatccccctaaagatgtaggtagggaaacacgggactatagcaaagga
atagtagccaataagaatgatggaaagaaggataacaataaaagaaagaatgagacgaag
aagtgcggcttggataagatgcaggaagcaggaaagcagaacgtggcagttcaggtgaaa
tcccagacggagatgaggaagactccagtatctgaagccaggaaaacacctgtaactcag
actccaagtcaggccagcagttctcagttcatccccattcatcacccaggagccttccct
ccccttcctagccggccagggtttccacctccaacctatgttgtcccccctcctgtggct
ttctccatgagcacggggtacaccttcccaggtagtgtttctgtcccaggaaccttcctc
cagcccacagctcactcgcctgcaggaaaccaggtgcaaggtgggaaacagtcccacatt
ccttacagccagcaacggccctctggaccagggccaatgacccagggacctcagcaaacg
ccacctccttcccagcaacccctctcatctttaccagctcaggcaacagcacagtccgct
ggccagttacaggtccaagctctggcccagcagcagcagcaacagtcccctacaaaagct
gtccagggcctggggaagagcccgccacaccactccggattccagcagtatccacagaca
gactcatcaaagcagctctggaacccgcctcaagtccagggctcactggggaagatcatg
cccgtaaagcagtcctattacctgcaggcccaggaccctctaaaattatttgaacagtca
ttacagcctcctgtgatgcaacagcaacctttggagaaaaaaatgaagcctttcccaatg
gagccatataaccaaaacccctcagaagtcaaggtgccagaatattactgggactcttcc
tatggcatggctgacaatagggtgatggcacagcagtctaacatggaccgcaggggaaaa
cggcaaggagtcttccgcccagagcaggatgctgtctccaggatgacctttgaggacccc
aagagctcccctctgcttcctccggacctgttaaagagtctagctgccttggaggaggag
gaagagctgattttctctaatcctcctgatctttacccagctctgctggggcctctcgcc
tctcttcctggacgaagcctctttaagtccctgctggaaaaaccatcagaactgatgtct
cagtcatcatctttcctgtccctcagtggcttttctctaaatcaggaaagatatcgtttt
gacagcatgttcaatgaggtatatgggaaaaacatgaataccagcacaaaaacagaagtc
accccgtcagtcgcccatcaggagacttcattatattctctctttgaagggactccgtgg
tctccatcccttccagccagctcagatcattcgacaccagccagccagtctcctcactcc
tccaaccccagcagcttgccaagctcccctccaactcataaccacaactctgttcccttc
tccaactttggacccattgggactccagacaacagagacaggagagtcgcagaccgctgg
aaaacagataagccagcaatgggagggtttggtctggactatctcccagcaacatcgtca
tcttcagagagcagctggcaccagtccagtgctcccagtggcacctgggcagcccaaggc
cctcccgctatggaggactcctcagctgtgcttatggagagcctgaagtccatctggtcc
agttccatgatgcaccctggaccctcagccctggagcagctgttaatgcagcagaagcag
aagcagcaacgcggacaaggctccatgaacccgccgcattga
DBGET
integrated database retrieval system