Charadrius vociferus (killdeer): 104285773
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Entry
104285773 CDS
T08577
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cvf
Charadrius vociferus (killdeer)
Pathway
cvf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cvf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104285773 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cvf03021
]
104285773 (SMARCA2)
03036 Chromosome and associated proteins [BR:
cvf03036
]
104285773 (SMARCA2)
Transcription machinery [BR:
cvf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104285773 (SMARCA2)
Chromosome and associated proteins [BR:
cvf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104285773 (SMARCA2)
Chromatin remodeling factors
BAF complex
104285773 (SMARCA2)
PBAF complex
104285773 (SMARCA2)
GBAF(ncBAF) complex
104285773 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
104285773
NCBI-ProteinID:
XP_009882576
LinkDB
All DBs
Position
Unknown
AA seq
1569 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMNQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPGAFNRQSGIGLHTMSGAATGP
GPAPGMPGHTAAITPKTWTEGQAPDISVSNAQQKLPAPPPSGRPSPAPPAAQPTAAMPGP
SVPQPPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENL
PGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLR
EARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWH
ANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLV
WEHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGK
VLLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLD
PNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGT
LKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLS
TLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKI
RWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIF
KSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVE
YVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQ
HIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIME
DYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVII
FDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGM
FDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRE
DARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEK
QWLRAIEDGNLEEMEEEIRLKKRKRRRNLDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKL
TKQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY
RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDED
EEEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQ
SEASGSDDE
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctaggacctagcccaggaccagggccatctcctggctccgtt
cacagcatgatggggccaagtcctggtccacccagtgtcccacatccaatgccgacaatg
gggcctactgattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
cacgaaaaaggaatggttgaagatgttcattgtggctccatgaagagtatgcgacctcct
caccctggaatgggcccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccttctccattaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaactccaccccagatgactcccagccagccaggacctattataccgggagacccacaa
gttatgaatcaacctaacagaggtccttccccttttagccctgtacagctgcatcagctg
cgggctcagattctagcatacaaaatgttagctagaggtcagccgttaccagaaaacctc
cagcttgctgttcagggcaagaggaccctgcctggcattcaacagcagcagcctcccggt
gccttcaacagacagtctggtattgggttacatacaatgagtggtgctgcaactggacca
ggccctgctccagggatgcctggacatacagctgccattactcctaaaacttggactgaa
ggccaagctccagatataagtgtctccaatgcccagcaaaagcttcccgcgccaccccct
agtgggagaccttctcctgccccccctgctgcccagcctactgccgccatgcctgggcct
tctgtaccacagccaccaccacctggacagccttcacccattgttcagctgcagcaaaag
cagaatcgcatcagccctatccagaagccacaaggattggatcctgttgaaatactccaa
gaacgtgaatataggcttcaggctcgaattgctcacaggatccaggagctggagaacttg
cctggttctctgcccccagatctgcgaaccaaagctacagtggagctgaaggcacttcga
ttactgaatttccagcgccagctaagacaagaggtagtagcctgcatgcgtcgtgacaca
acactggagacagcactgaactccaaagcctacaaacgaagcaaacgccagactttgagg
gaggcccgtatgacagaaaagcttgagaagcagcagaagatagaacaggagaggaagcgt
aggcagaagcatcaggaatacctgaatagcatattgcagcatgctaaagattttaaggag
taccaccggtcagttgctgggaaaatccagaagctttctaaagctgtagcaacttggcat
gccaacactgagcgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgagg
agactaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagataga
cgactagcctacctgttgcagcagacagatgagtatgtggctaatttgactaacctggta
tgggagcataaacaggcacaagcagccaaagagaagaagaagagaaggagaagaaagaag
aaggctgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccata
gatgagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaa
gttcttcttggaccagaagcaccaaaagcaagtcagctggatgcttggctggaaatgaac
cctggctatgaagttgctcccaggtcagacagtgaagatgaaagtggctctgaatatgag
gaggaggatgacgaagaagaatcaagcaggttagaagcagatgagaaaatactcctggat
cctaacagtgaggaagtttctgagaaagatgcaaagcaaatcatagagacagccaaacaa
gatgtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacact
gttgctcatgcaatcacagaaagggtggaaaagcagtcttctcttcttattaatggcaca
ctaaaacattatcagcttcagggactggaatggatggtctcactctataataacaatctg
aatggaattttagctgatgaaatgggactaggaaagacaatacagaccattgcactcatc
acttacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccctttcg
actttatccaattggacatatgaatttgacaaatgggctccttctgtggtgaagatatct
tacaagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaattt
aatgttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagatt
cgatggaaatacatgatagtagatgaaggccatcgaatgaagaaccatcactgcaagctg
actcaggtcttgaatactcactatgtggcccctaggcgaatactgctgactgggactcca
ttgcagaacaaactgcctgaactttgggctcttctcaatttcctcctcccaaccattttc
aagagctgtagcacctttgaacagtggttcaacgctccatttgccatgaccggagaaagg
gttgacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgctccga
cccttcttgctgagaagattgaagaaagaggttgagtctcaactgccagaaaaggtggaa
tacgtgatcaaatgtgatatgtcagctcttcagaagatcctgtaccgtcacatgcaagcc
aagggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggcggggcaaaa
actctcatgaacactatcatgcaattgagaaagatatgcaatcacccgtatatgtttcaa
cacattgaggagtccttcgctgaacatttaggctactcaaatggtgtcatcaatggagct
gaactttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacga
gctactaaccatcgcgtgctgcttttttgtcaaatgacgtcactcatgaccattatggaa
gactactttgcctttaggaatttcctttacctgcgtcttgatggcacaacaaaatcagag
gatcgagctgctctgttgaagaagttcaatgaacctgggtcacaatacttcatcttcttg
ctgagtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatc
tttgatagtgactggaatcctcaccaggacttgcaggcccaagaccgagctcatcgaatt
ggtcagcagaatgaggttcgagtcctgcgactgtgcactgtgaacagtgtggaagagaag
atactcgctgctgcgaagtataaactgaatgtagatcaaaaagttattcaggctggaatg
tttgatcagaaatcttcaagccacgaaaggagagccttcctacaggctatattggagcac
gaagaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgatt
gctcgacgtgaggaggaatttgatctctttatgcgcatggacatggaccgtcgcagggag
gatgccagaaaccccaagcgtaaaccccgcttgatggaggaagatgaattaccatcctgg
attattaaggatgatgctgaagttgaaagacttacatgtgaagaagaagaagagaaaata
ttcggaagaggatcccgccaacgcagggatgtggactacagtgatgctctcacagagaaa
caatggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaaatccggctt
aaaaaacggaagagacgaagaaatttggataaggattctgggaaagaggatggggagaaa
gcaaagaaaagaagaggcagacctcctgcggagaagttgtcacccaacccacccaaactg
acaaaacaaatgaatgccatcattgatactgtgataaactacaaggatagttcaggacgg
cagctaagtgaagtcttcattcagctcccatctaggaaagaattaccagagtattatgaa
ttgattagaaaaccagtggacttcaaaaagataaaggaaagaattcgcaaccataagtat
cggagccttggagacttggagaaggatgtcatgttgctgtgtcacaatgctcagacattc
aatttggagggatcgcagatctatgaggattccattgttcttcagtctgtgttcaaaagt
gcacgacagaagattgccaaagaagaagaaagtgaggatgaaagcaatgatgacgaagat
gaagaagaagaagaagaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagcta
aataagaaagatgaaaaaagccgggagaaaggaaaaggcaagaagaggcaaagccgagca
aaagccaaacctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccag
tcggaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
